iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000003481.2	ENSCJAT00000006713.1	ENSCJAP00000006360.1
ENSCJAG00000003481.2	ENSCJAT00000062126.1	ENSCJAP00000047360.1
ENSCJAG00000003481.2	ENSCJAT00000060766.1	ENSCJAP00000048970.1
ENSCJAG00000003481.2	ENSCJAT00000006703.1	ENSCJAP00000006350.1
ENSCJAG00000003481.2	ENSCJAT00000058158.1	ENSCJAP00000043359.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-23	81.3	583	614
UBD/Beta-Prp	4.90e-40	138.5	545	854

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH + v+ +++ +d + l+s + D t++vW+ 
   Q: 583  GHDGAVNTVCWsHDqRWLLSTAQDRTLRVWSA 614
           8**********988899*************95 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..ghedsvl 98
           +++c+++s d+++la g +++   v+d++   + + +sgh+++v++v++s+d+ +l+++++Drt++vw+ +  +    l     ++ + 
   Q: 545  RVCCIQYSGDGQWLACGLANRLCLVFDASLTGTPAVFSGHDGAVNTVCWSHDQRWLLSTAQDRTLRVWSARRTELALLLGkdMFSKPIQ 633
           6899****************************************************************999888877776335577899 PP
   S: 99   slsfspsgdklvsGshdrtirv..wdletgqclee..............tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgk 170
           s +f+  + +++  s+    ++  ++++t +   +               l+   +v++  +v+++   ++ +++ +rtv ++dl+ g+
   Q: 634  SAQFYYIDAFIL-LSSGPEFQLlkYHIDTCKDEIKrykqrsksklvcrlSLTDAGDVTCLSAVNDFYsHIVLTAGRNRTVEVFDLNAGC 721
           999999555555.333333444234444433333356666666666686555555555555666666899******************* PP
   S: 171  llrtltgghtdsvysls......fdsng....kelvsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsir 247
                 ++h ++v+ +       f+ ++    + +++ +     +lwdl+t +c r ++gh   + ++ ++fsp + + ++g++D+  +
   Q: 722  SAAVIAEAHSRPVHQICqnkgssFTTQQpqayNLFLTTAIGDGMRLWDLRTLRCERHFEGHPnrSYPCGIAFSPCGRFAACGAEDRHAY 810
           *****999********966676666666999999**************************96448899********************* PP
   S: 248  iWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniw 292
           ++ + s+ + + l++h + v++va+ +++ + l +++ d+k++++
   Q: 811  MYEMGSSMFSHRLAGHTDIVTAVAF-NPSAPQLTTATLDGKLQLF 854
           *************************.*************999876 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MENPQDIFSS NGGCVRDIVI EKYLVESKES ASHVQLACSM QHCAFPLDGN ELCIWNTEDP 60
SHQLLILRGH HQPITAMAFG NKVNPLLICS ASLDYVIMWN LDECRKKVLQ GLVPRGTVMG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGAGGCG GAAGTTACGC TAGGCCCGGA AGTAAGCCGG CCGGAAGCGA GGCCTCGCCA 60
GCTGTCGCGA GATAGCGAAG GGGGCGTGGG CGCGTGCGGC GCGTCAGGCG TCTGCTTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002258	Ailuropoda melanoleuca	60.51	0.00e+00	831.00
IUUC-Aca-004807	Anolis carolinensis	55.22	0.00e+00	917.00
IUUC-Bta-013316	Bos taurus	62.24	0.00e+00	1013.00
IUUC-Cfa-020895	Canis familiaris	64.89	0.00e+00	1091.00
IUUC-Cpo-022282	Cavia porcellus	58.64	0.00e+00	1004.00
IUUC-Csa-023439	Chlorocebus sabaeus	82.57	0.00e+00	1328.00
IUUC-Cho-025046	Choloepus hoffmanni	56.75	0.00e+00	650.00
IUUC-Dre-028376	Danio rerio	41.92	4.00e-168	585.00
IUUC-Dno-029649	Dasypus novemcinctus	66.31	0.00e+00	937.00
IUUC-Dor-030824	Dipodomys ordii	57.02	0.00e+00	728.00
IUUC-Eca-033270	Equus caballus	66.86	0.00e+00	1140.00
IUUC-Fca-036149	Felis catus	60.56	0.00e+00	1025.00
IUUC-Fal-037410	Ficedula albicollis	53.96	0.00e+00	719.00
IUUC-Gmo-038923	Gadus morhua	38.71	1.00e-124	440.00
IUUC-Gga-040974	Gallus gallus	48.82	0.00e+00	793.00
IUUC-Gac-042310	Gasterosteus aculeatus	36.83	6.00e-103	368.00
IUUC-Ggo-044557	Gorilla gorilla	86.71	0.00e+00	1499.00
IUUC-Hsa-046312	Homo sapiens	87.38	0.00e+00	1498.00
IUUC-Itr-049033	Ictidomys tridecemlineatus	61.99	0.00e+00	1023.00
IUUC-Laf-054450	Loxodonta africana	60.43	0.00e+00	967.00
IUUC-Mcc-055807	Macaca mulatta	79.16	0.00e+00	1189.00
IUUC-Meu-056116	Macropus eugenii	39.70	3.00e-74	273.00
IUUC-Mga-060088	Meleagris gallopavo	49.15	0.00e+00	694.00
IUUC-Mdo-062857	Monodelphis domestica	57.78	0.00e+00	1000.00
IUUC-Mmu-063220	Mus musculus	59.95	0.00e+00	883.00
IUUC-Mpu-066921	Mustela putorius furo	60.24	0.00e+00	954.00
IUUC-Mlu-067717	Myotis lucifugus	56.14	0.00e+00	733.00
IUUC-Nle-069061	Nomascus leucogenys	74.23	0.00e+00	1221.00
IUUC-Opr-070612	Ochotona princeps	61.63	2.00e-84	307.00
IUUC-Ont-072187	Oreochromis niloticus	41.27	3.00e-172	598.00
IUUC-Oan-072701	Ornithorhynchus anatinus	47.91	2.00e-124	438.00
IUUC-Ocu-074602	Oryctolagus cuniculus	64.45	0.00e+00	1063.00
IUUC-Ola-086633	Oryzias latipes	35.57	4.00e-124	438.00
IUUC-Oga-088499	Otolemur garnettii	66.24	0.00e+00	1111.00
IUUC-Oar-089256	Ovis aries	61.06	0.00e+00	985.00
IUUC-Ptr-091545	Pan troglodytes	86.30	0.00e+00	998.00
IUUC-Pan-092299	Papio anubis	81.02	0.00e+00	1419.00
IUUC-Psi-093010	Pelodiscus sinensis	55.72	0.00e+00	927.00
IUUC-Pab-097646	Pongo abelii	83.02	0.00e+00	960.00
IUUC-Pca-100720	Procavia capensis	52.91	8.00e-140	491.00
IUUC-Pva-102808	Pteropus vampyrus	57.80	0.00e+00	870.00
IUUC-Rno-105715	Rattus norvegicus	62.31	0.00e+00	1031.00
IUUC-Sha-107546	Sarcophilus harrisii	55.52	0.00e+00	971.00
IUUC-Sar-113543	Sorex araneus	54.28	0.00e+00	832.00
IUUC-Ssc-116335	Sus scrofa	73.13	1.00e-52	199.00
IUUC-Tgu-117249	Taeniopygia guttata	49.41	0.00e+00	705.00
IUUC-Tsy-119238	Tarsius syrichta	63.06	0.00e+00	1042.00
IUUC-Tni-120639	Tetraodon nigroviridis	33.69	2.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence