iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109219

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB43

Genbank Nucleotide ID

GL377569

Gene Name

PUB43-2; SELMODRAFT_82283

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_82283	EFJ34795	EFJ34795

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.00e-20	71.2	29	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++e+flCp+++ +M+dPv++  +G ty+r++Ie ++a+++       cP t+++l++ dl+ ++++r+ i++w+++n+s
   Q: 29   PYEAFLCPLTGRVMSDPVTIVeTGKTYERKAIEAFFANCQDnkkpaICPQTSKKLQSLDLKASIAIRNAIEEWHARNES 107
           689***************9888**************6666666788*****************************9986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MFDNVVKRHH GRSSGNYHES RQRRRYEDPY EAFLCPLTGR VMSDPVTIVE TGKTYERKAI 60
EAFFANCQDN KKPAICPQTS KKLQSLDLKA SIAIRNAIEE WHARNESTRI ENAVPMLDAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTGATA ACGTTGTCAA GAGACATCAT GGACGCAGCA GCGGTAACTA CCACGAGTCT 60
CGGCAGCGGC GACGCTACGA GGATCCTTAC GAGGCGTTTC TCTGCCCGTT GACTGGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_82283

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	46.45	0.00e+00	677.00
IUUC-Atr-002916	Amborella trichopoda	51.05	0.00e+00	740.00
IUUC-Aly-005480	Arabidopsis lyrata	44.79	0.00e+00	640.00
IUUC-Ath-007569	Arabidopsis thaliana	45.40	0.00e+00	650.00
IUUC-Bdi-014487	Brachypodium distachyon	46.33	0.00e+00	672.00
IUUC-Bol-016384	Brassica oleracea	44.85	3.00e-167	581.00
IUUC-Bra-017841	Brassica rapa	45.08	4.00e-179	620.00
IUUC-Cja-019246	Callithrix jacchus	33.33	3.00e-05	41.60
IUUC-Eca-034371	Equus caballus	34.21	1.00e-05	42.70
IUUC-Gma-044318	Glycine max	49.75	0.00e+00	737.00
IUUC-Hsa-046704	Homo sapiens	36.00	2.00e-06	45.10
IUUC-Hvu-047783	Hordeum vulgare	46.45	0.00e+00	679.00
IUUC-Lpe-050971	Leersia perrieri	47.51	0.00e+00	647.00
IUUC-Mac-064911	Musa acuminata	45.65	0.00e+00	629.00
IUUC-Nle-070109	Nomascus leucogenys	34.67	9.00e-06	43.10
IUUC-Oba-075225	Oryza barthii	47.01	0.00e+00	665.00
IUUC-Obr-076103	Oryza brachyantha	47.01	0.00e+00	640.00
IUUC-Ogl-077529	Oryza glaberrima	46.89	0.00e+00	663.00
IUUC-Ogu-078735	Oryza glumaepatula	47.01	0.00e+00	665.00
IUUC-Oin-079422	Oryza indica	46.95	0.00e+00	655.00
IUUC-Olo-080957	Oryza longistaminata	39.72	6.00e-132	464.00
IUUC-Ome-081455	Oryza meridionalis	46.77	0.00e+00	664.00
IUUC-Oni-082690	Oryza nivara	47.07	0.00e+00	656.00
IUUC-Opu-083157	Oryza punctata	46.89	0.00e+00	663.00
IUUC-Oru-085058	Oryza rufipogon	46.95	0.00e+00	655.00
IUUC-Osa-086000	Oryza sativa	46.95	0.00e+00	655.00
IUUC-Ptr-091582	Pan troglodytes	36.00	2.00e-06	45.10
IUUC-Ppa-096021	Physcomitrella patens	56.69	0.00e+00	883.00
IUUC-Pab-098005	Pongo abelii	36.00	2.00e-06	45.10
IUUC-Pop-099966	Populus trichocarpa	49.69	0.00e+00	714.00
IUUC-Ppe-101973	Prunus persica	48.71	0.00e+00	711.00
IUUC-Sit-110490	Setaria italica	47.09	0.00e+00	659.00
IUUC-Sly-111702	Solanum lycopersicum	50.13	0.00e+00	659.00
IUUC-Stu-111962	Solanum tuberosum	49.69	0.00e+00	700.00
IUUC-Sbi-113974	Sorghum bicolor	44.10	7.00e-172	597.00
IUUC-Tca-121113	Theobroma cacao	49.75	0.00e+00	745.00
IUUC-Tae-125341	Triticum aestivum	44.36	3.00e-166	578.00
IUUC-Tur-126573	Triticum urartu	46.08	0.00e+00	674.00
IUUC-Ttr-128602	Tursiops truncatus	34.29	2.00e-04	38.90
IUUC-Vvi-131623	Vitis vinifera	50.06	0.00e+00	766.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence