iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105018

Ensembl Protein ID

ENSRNOP00000039443.5

UniProt Accession

F1LYQ6; F1LYQ6_RAT

Genbank Protein ID

ENSRNOP00000039443

Protein Name

WD repeat domain 97

Genbank Nucleotide ID

AC107096

Gene Name

Wdr97; RGD1562063

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000033520.5	ENSRNOT00000049198.5	ENSRNOP00000039443.5

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-16	59.3	339	371

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gHt++vt++   ++ tl vs+s Dgti+ WDl 
   Q: 339  GHTGPVTAMMVlPNsTLAVSASQDGTIRTWDLQ 371
           8*******9868776****************85 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGDMEDKILD TILRSEIDSL AVDLADFYDQ DIYDIPDPGV LIEKNELGLL GGPEVPQLFT 60
NSQRWRSMSL RSRARLLWLH LRAYLHDIVE KEKRAELRVA RMTHGLEPLR RLEVETGLCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTAGCATT TGGTATCTTA GCAACAGCTG CTGCCTTACC GTTACTTAGT CTCAGAGCTG 60
TTAATATCTC TTAACCTCTG GGACTGCCCA TGGGAGACAT GGAGGACAAG ATATTGGACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

rno:500896

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001634	Ailuropoda melanoleuca	56.57	0.00e+00	1364.00
IUUC-Aca-004338	Anolis carolinensis	33.05	2.00e-93	336.00
IUUC-Ame-011119	Astyanax mexicanus	31.69	4.00e-19	88.20
IUUC-Bta-013156	Bos taurus	56.55	0.00e+00	1374.00
IUUC-Cja-019751	Callithrix jacchus	50.29	0.00e+00	697.00
IUUC-Cfa-020762	Canis familiaris	61.23	0.00e+00	1055.00
IUUC-Cpo-021294	Cavia porcellus	68.65	0.00e+00	1052.00
IUUC-Csa-023056	Chlorocebus sabaeus	57.95	0.00e+00	1427.00
IUUC-Dre-027485	Danio rerio	28.87	9.00e-56	212.00
IUUC-Dno-029124	Dasypus novemcinctus	66.41	0.00e+00	865.00
IUUC-Dor-031028	Dipodomys ordii	66.83	0.00e+00	848.00
IUUC-Eca-033731	Equus caballus	71.02	0.00e+00	962.00
IUUC-Eeu-035238	Erinaceus europaeus	58.51	1.00e-110	394.00
IUUC-Fca-035830	Felis catus	70.02	0.00e+00	1097.00
IUUC-Ggo-045403	Gorilla gorilla	58.05	0.00e+00	1514.00
IUUC-Hsa-045809	Homo sapiens	58.17	0.00e+00	1531.00
IUUC-Itr-048146	Ictidomys tridecemlineatus	59.70	0.00e+00	1604.00
IUUC-Lch-050064	Latimeria chalumnae	34.37	6.00e-104	371.00
IUUC-Loc-051877	Lepisosteus oculatus	31.47	9.00e-88	318.00
IUUC-Mcc-055043	Macaca mulatta	57.69	0.00e+00	1398.00
IUUC-Meu-056016	Macropus eugenii	51.10	0.00e+00	658.00
IUUC-Mmr-061379	Microcebus murinus	57.84	0.00e+00	1521.00
IUUC-Mmu-064193	Mus musculus	77.77	0.00e+00	2284.00
IUUC-Mlu-067080	Myotis lucifugus	55.09	0.00e+00	1337.00
IUUC-Nle-069838	Nomascus leucogenys	57.82	0.00e+00	1439.00
IUUC-Opr-071152	Ochotona princeps	69.30	4.00e-117	415.00
IUUC-Oga-088927	Otolemur garnettii	57.85	0.00e+00	1517.00
IUUC-Oar-089930	Ovis aries	51.33	0.00e+00	916.00
IUUC-Ptr-091677	Pan troglodytes	67.38	0.00e+00	976.00
IUUC-Pan-092861	Papio anubis	57.82	0.00e+00	1420.00
IUUC-Pfo-097158	Poecilia formosa	29.96	6.00e-61	228.00
IUUC-Pab-097743	Pongo abelii	70.68	0.00e+00	1008.00
IUUC-Pca-100520	Procavia capensis	72.00	0.00e+00	738.00
IUUC-Pva-102814	Pteropus vampyrus	71.47	0.00e+00	969.00
IUUC-Sar-113385	Sorex araneus	58.39	0.00e+00	729.00
IUUC-Ssc-115745	Sus scrofa	56.14	0.00e+00	1388.00
IUUC-Tbe-127804	Tupaia belangeri	67.69	1.00e-151	530.00
IUUC-Ttr-128208	Tursiops truncatus	68.59	0.00e+00	983.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence