iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043067

Ensembl Protein ID

GLYMA12G04990.1

UniProt Accession

I1LQ62; I1LQ62_SOYBN

Genbank Protein ID

KRH24509.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845

Gene Name

LOC100816481; GLYMA_12G045800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G04990	GLYMA12G04990.1	GLYMA12G04990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-27	95.5	16	49
UBD/Beta-Prp	2.50e-51	176.3	12	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           gH+d+v++++   s + ++++s+D t+++W+l+++
   Q: 16   GHEDDVRGICVcgS-KGIATSSRDRTVRLWSLDDN 49
           8********98653.669*************9875 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk.....ilvtgseDrtikvwdlstgkcvh 88
           ++l+gh+++v   +++  +++ +at+srd+t+++w++++       + l gh+++v  + ++p  +       v+g+ D +++vwdl+tg+ vh
   Q: 12   CELRGHEDDVRG-ICV-CGSKGIATSSRDRTVRLWSLDDNRRfasSKILLGHTSFVGPLAWIPPNSdlphgGVVSGGMDTLVCVWDLKTGEKVH 103
           89999**99998.666.47777*****************9987877889***********998766788889********************** PP
   S: 89   tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv.ncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtd 181
           tlkgh+ +v+ ++f+     +vs s d t++ w  ++gq +e   + h++ v +++++++    lv+Gs D+t++lW+   +++l+t++g h d
   Q: 104  TLKGHQLQVTGIAFDD--GDVVSSSVDCTLKRW--RNGQSVE-SWEAHKAPVqTVIKLPS--GELVTGSSDTTLKLWRG--KTCLHTFQG-HSD 187
           ****************..99*************..*******.55566655505556666..779************66..99******9.*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsf 275
            v+ ls+ s g  ++s+s+dg+++lw + +ge+++++ ght+ v+sv+ +  + ++vsgs+D+  ++W  + g ++++++++   v+  ++  +
   Q: 188  TVRGLSVMS-GLGILSASHDGSLRLWAV-SGEVLMEMVGHTAIVYSVDSH-ASGLIVSGSEDRFAKVW--KDGVCVQSIEHPG-CVWDAKF--M 273
           *******99.68****************.999******************.9****************..89********987.9******..* PP
   S: 276  gdnvlvlgsedskvniwklkkn 297
           ++  +v++ +d+ v+iw  +++
   Q: 274  ENGDIVTACSDGVVRIWTIDQD 295
           *****************99876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDIDFKEYQL RCELRGHEDD VRGICVCGSK GIATSSRDRT VRLWSLDDNR RFASSKILLG 60
HTSFVGPLAW IPPNSDLPHG GVVSGGMDTL VCVWDLKTGE KVHTLKGHQL QVTGIAFDDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGTGTAGA ACGGTAGAAG CCACTTTGGC TACAGAGTTG GTGTTGTGTC TTGCGAAAGA 60
GGAAAAACGT AGAAAGAAGC AAGCAAGGAA GCGTGCTAGC TGGGTTTGTT TCTGTTGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

gmx:100816481

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	61.18	0.00e+00	910.00
IUUC-Aml-002125	Ailuropoda melanoleuca	33.50	4.00e-113	402.00
IUUC-Atr-002554	Amborella trichopoda	66.18	0.00e+00	989.00
IUUC-Apl-004094	Anas platyrhynchos	32.19	2.00e-103	370.00
IUUC-Aca-004726	Anolis carolinensis	33.55	6.00e-112	398.00
IUUC-Aly-005961	Arabidopsis lyrata	72.16	0.00e+00	1116.00
IUUC-Ath-006639	Arabidopsis thaliana	71.64	0.00e+00	1082.00
IUUC-Ago-007772	Ashbya gossypii	29.60	5.00e-72	265.00
IUUC-Ani-009186	Aspergillus nidulans	30.61	1.00e-82	300.00
IUUC-Ang-009575	Aspergillus niger	31.77	2.00e-80	293.00
IUUC-Ate-010541	Aspergillus terreus	30.50	4.00e-80	292.00
IUUC-Ame-011633	Astyanax mexicanus	32.75	1.00e-107	384.00
IUUC-Bta-013218	Bos taurus	33.08	8.00e-115	408.00
IUUC-Bci-013876	Botrytis cinerea	33.33	9.00e-94	338.00
IUUC-Bol-016006	Brassica oleracea	70.84	0.00e+00	1097.00
IUUC-Bra-017593	Brassica rapa	71.11	0.00e+00	1103.00
IUUC-Cja-019270	Callithrix jacchus	33.08	8.00e-115	407.00
IUUC-Cfa-021262	Canis familiaris	33.46	4.00e-113	402.00
IUUC-Cpo-021449	Cavia porcellus	31.98	1.00e-102	367.00
IUUC-Csa-024140	Chlorocebus sabaeus	32.96	3.00e-114	406.00
IUUC-Cho-024923	Choloepus hoffmanni	38.96	1.00e-43	171.00
IUUC-Cin-025373	Ciona intestinalis	30.75	1.00e-90	327.00
IUUC-Csv-026324	Ciona savignyi	30.60	2.00e-82	300.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	27.64	1.00e-66	248.00
IUUC-Cne-026998	Cryptococcus neoformans	29.84	2.00e-48	187.00
IUUC-Cme-027154	Cyanidioschyzon merolae	29.03	6.00e-57	215.00
IUUC-Dre-028674	Danio rerio	31.62	3.00e-104	373.00
IUUC-Dno-028966	Dasypus novemcinctus	32.92	9.00e-114	404.00
IUUC-Dor-030343	Dipodomys ordii	28.43	8.00e-52	198.00
IUUC-Dme-032044	Drosophila melanogaster	28.37	1.00e-72	268.00
IUUC-Ete-032506	Echinops telfairi	28.34	6.00e-50	192.00
IUUC-Eca-033547	Equus caballus	33.08	3.00e-115	409.00
IUUC-Eeu-034462	Erinaceus europaeus	39.39	8.00e-44	172.00
IUUC-Fca-035893	Felis catus	33.50	1.00e-114	407.00
IUUC-Fal-037235	Ficedula albicollis	32.42	2.00e-111	397.00
IUUC-Fox-037836	Fusarium oxysporum	29.99	6.00e-82	298.00
IUUC-Fso-038251	Fusarium solani	29.06	3.00e-81	296.00
IUUC-Gmo-038648	Gadus morhua	33.18	1.00e-97	350.00
IUUC-Ggr-039867	Gaeumannomyces graminis	28.50	2.00e-76	280.00
IUUC-Gga-040989	Gallus gallus	34.34	1.00e-115	410.00
IUUC-Gac-041344	Gasterosteus aculeatus	31.00	2.00e-93	337.00
IUUC-Ggo-045009	Gorilla gorilla	35.52	3.00e-95	342.00
IUUC-Hsa-046807	Homo sapiens	32.83	2.00e-113	403.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	32.96	2.00e-115	409.00
IUUC-Kpa-049134	Komagataella pastoris	28.07	4.00e-70	259.00
IUUC-Lch-049597	Latimeria chalumnae	35.76	2.00e-75	276.00
IUUC-Loc-051849	Lepisosteus oculatus	32.54	1.00e-106	380.00
IUUC-Lma-053297	Leptosphaeria maculans	29.85	1.00e-79	291.00
IUUC-Laf-053495	Loxodonta africana	32.51	4.00e-112	399.00
IUUC-Meu-055983	Macropus eugenii	37.96	1.00e-36	148.00
IUUC-Mor-057006	Magnaporthe oryzae	28.73	3.00e-72	266.00
IUUC-Mtr-058374	Medicago truncatula	84.30	0.00e+00	1344.00
IUUC-Mvi-060297	Microbotryum violaceum	29.80	4.00e-83	302.00
IUUC-Mmr-060810	Microcebus murinus	32.04	4.00e-103	369.00
IUUC-Mdo-062671	Monodelphis domestica	32.67	1.00e-110	394.00
IUUC-Mmu-063536	Mus musculus	33.08	2.00e-112	400.00
IUUC-Mac-064902	Musa acuminata	67.99	0.00e+00	1068.00
IUUC-Mpu-066085	Mustela putorius furo	33.88	6.00e-115	408.00
IUUC-Mlu-067907	Myotis lucifugus	36.50	6.00e-91	328.00
IUUC-Nfi-068457	Neosartorya fischeri	31.27	5.00e-64	239.00
IUUC-Nle-069049	Nomascus leucogenys	32.33	2.00e-109	389.00
IUUC-Ont-071339	Oreochromis niloticus	32.94	2.00e-104	373.00
IUUC-Oan-073353	Ornithorhynchus anatinus	39.91	4.00e-43	167.00
IUUC-Ocu-074625	Oryctolagus cuniculus	33.33	2.00e-115	410.00
IUUC-Olo-080849	Oryza longistaminata	53.21	0.00e+00	704.00
IUUC-Opu-084103	Oryza punctata	58.22	0.00e+00	868.00
IUUC-Ola-086974	Oryzias latipes	31.54	1.00e-103	371.00
IUUC-Oga-088052	Otolemur garnettii	31.42	1.00e-101	364.00
IUUC-Oar-089509	Ovis aries	32.80	1.00e-111	397.00
IUUC-Ptr-090911	Pan troglodytes	32.83	3.00e-113	402.00
IUUC-Pan-092141	Papio anubis	32.96	8.00e-113	401.00
IUUC-Psi-093543	Pelodiscus sinensis	32.00	9.00e-101	361.00
IUUC-Pno-094952	Phaeosphaeria nodorum	30.65	7.00e-77	281.00
IUUC-Ppa-095881	Physcomitrella patens	55.51	0.00e+00	855.00
IUUC-Pfo-096739	Poecilia formosa	31.90	2.00e-98	353.00
IUUC-Pab-098641	Pongo abelii	32.79	7.00e-113	401.00
IUUC-Pop-099493	Populus trichocarpa	76.52	0.00e+00	1173.00
IUUC-Pca-100599	Procavia capensis	29.85	3.00e-87	316.00
IUUC-Ppe-101874	Prunus persica	80.63	0.00e+00	1260.00
IUUC-Pva-103009	Pteropus vampyrus	31.63	2.00e-86	313.00
IUUC-Pgr-103260	Puccinia graminis	30.97	2.00e-77	284.00
IUUC-Ptt-103711	Puccinia triticina	28.50	2.00e-67	250.00
IUUC-Pte-104337	Pyrenophora teres	31.59	2.00e-78	286.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	31.42	3.00e-78	286.00
IUUC-Rno-105273	Rattus norvegicus	32.83	5.00e-114	405.00
IUUC-Sce-106351	Saccharomyces cerevisiae	31.60	7.00e-68	251.00
IUUC-Sha-106758	Sarcophilus harrisii	31.93	3.00e-109	389.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	27.66	1.00e-83	304.00
IUUC-Spo-108093	Schizosaccharomyces pombe	30.26	1.00e-93	337.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	32.86	4.00e-85	309.00
IUUC-Smo-109368	Selaginella moellendorffii	50.39	0.00e+00	767.00
IUUC-Sly-111063	Solanum lycopersicum	73.65	0.00e+00	1104.00
IUUC-Sar-113199	Sorex araneus	37.85	1.00e-74	275.00
IUUC-Sre-115080	Sporisorium reilianum	35.26	3.00e-75	276.00
IUUC-Ssc-115666	Sus scrofa	32.71	3.00e-112	399.00
IUUC-Tgu-116877	Taeniopygia guttata	32.26	1.00e-109	391.00
IUUC-Tru-117580	Takifugu rubripes	33.17	2.00e-105	376.00
IUUC-Tsy-118946	Tarsius syrichta	31.70	4.00e-101	362.00
IUUC-Tni-119755	Tetraodon nigroviridis	33.63	1.00e-106	380.00
IUUC-Tca-120977	Theobroma cacao	75.32	0.00e+00	1199.00
IUUC-Tre-122217	Trichoderma reesei	30.01	3.00e-82	299.00
IUUC-Tvi-122671	Trichoderma virens	29.54	4.00e-79	289.00
IUUC-Tur-126404	Triticum urartu	40.96	9.00e-73	268.00
IUUC-Tme-126971	Tuber melanosporum	33.20	8.00e-109	387.00
IUUC-Tbe-127858	Tupaia belangeri	37.43	2.00e-29	124.00
IUUC-Ttr-128173	Tursiops truncatus	33.29	6.00e-113	401.00
IUUC-Uma-129322	Ustilago maydis	28.08	3.00e-77	283.00
IUUC-Vda-129682	Verticillium dahliae	29.31	4.00e-74	272.00
IUUC-Vpa-130607	Vicugna pacos	32.45	4.00e-104	372.00
IUUC-Vvi-131153	Vitis vinifera	76.02	0.00e+00	1176.00
IUUC-Xtr-132208	Xenopus tropicalis	32.37	8.00e-108	384.00
IUUC-Xma-133098	Xiphophorus maculatus	32.05	5.00e-98	352.00
IUUC-Yli-134646	Yarrowia lipolytica	34.81	4.00e-70	259.00
IUUC-Zma-135920	Zea mays	57.88	0.00e+00	940.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence