• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Ssc-116120
Ensembl Protein ID ENSSSCP00000023307.1
UniProt Accession I3LGW3; I3LGW3_PIG
Genbank Protein ID ENSSSCP00000023307
Protein Name Probable ATP-dependent RNA helicase DDX58
Genbank Nucleotide ID FP340205
Gene Name DDX58
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000030408.1 ENSSSCT00000026775.1 ENSSSCP00000023307.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/CARD 3.90e-46 155.8 101 172
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/CARD

   S: 3    eeyrlllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL..vqkegWfrefl 73
    eeyr ll +lq+++++++ ++d+l +++e+l+ +e+e+il++++ kg m++ae+++++L ++ke+W+++++
   Q: 101 EEYRSLLRRLQPEFKTTINPKDILP-EIAECLISQECEEILQICSSKGLMAGAEKMVECLlrSDKENWPKTLK 172
    9************************.********************************************985 PP
   

Organism Sus scrofa
Protein Sequence
(Fasta)
MTAEQRRNLH AFGDYVRKTL DPTFILSYMA PWFRDDEVQH IQAEKNNKGP TEAASLFLQF 60
LLELQEEGWF RGFLDALNQA GYCGLCEAIE SWDFQKIEKL EEYRSLLRRL QPEFKTTINP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ssc-116120|UBD,CARD|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCACGCATC CGAGAAGAAA TGAAACCGCG CTGGGAAAGT GAGGGCTCGG GGGTTGGGCC 60
GGTTCCGCCC ATTTCCCAAC TCGTCGCAGT TTCGATTCTC GGTTCTTCAG CTACTCCGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ssc-116120|UBD,CARD|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR031964--CARD_dom
IPR011545--DEAD/DEAH_box_helicase_dom
IPR011029--DEATH-like_dom
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00270--DEAD
PF00271--Helicase_C
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0003676--F:nucleic acid binding

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001898 Ailuropoda melanoleuca 80.32 0.00e+00 1472.00
IUUC-Apl-003966 Anas platyrhynchos 52.02 0.00e+00 883.00
IUUC-Aca-004499 Anolis carolinensis 47.18 0.00e+00 774.00
IUUC-Ame-011950 Astyanax mexicanus 42.22 0.00e+00 659.00
IUUC-Bta-012489 Bos taurus 82.41 0.00e+00 1527.00
IUUC-Cel-018230 Caenorhabditis elegans 29.78 4.00e-61 229.00
IUUC-Cja-018716 Callithrix jacchus 77.96 0.00e+00 1399.00
IUUC-Cfa-020269 Canis familiaris 81.34 0.00e+00 1483.00
IUUC-Cpo-022507 Cavia porcellus 71.23 0.00e+00 1302.00
IUUC-Cre-022916 Chlamydomonas reinhardtii 29.82 2.00e-08 55.10
IUUC-Csa-024209 Chlorocebus sabaeus 78.39 0.00e+00 1436.00
IUUC-Cho-025104 Choloepus hoffmanni 72.59 0.00e+00 1154.00
IUUC-Cin-025792 Ciona intestinalis 32.51 2.00e-74 273.00
IUUC-Cgl-026385 Colletotrichum gloeosporioides 25.14 4.00e-22 100.00
IUUC-Dre-028305 Danio rerio 33.66 3.00e-79 290.00
IUUC-Dno-028954 Dasypus novemcinctus 76.69 0.00e+00 1385.00
IUUC-Dor-030410 Dipodomys ordii 35.95 3.00e-79 290.00
IUUC-Ete-032950 Echinops telfairi 33.86 8.00e-56 212.00
IUUC-Eca-034039 Equus caballus 80.56 0.00e+00 1477.00
IUUC-Eeu-035009 Erinaceus europaeus 67.72 0.00e+00 894.00
IUUC-Fca-036169 Felis catus 82.42 0.00e+00 1540.00
IUUC-Fal-037579 Ficedula albicollis 53.11 0.00e+00 890.00
IUUC-Fso-038398 Fusarium solani 28.57 6.00e-11 63.50
IUUC-Gmo-038598 Gadus morhua 34.12 1.00e-75 277.00
IUUC-Gga-040467 Gallus gallus 32.10 4.00e-89 323.00
IUUC-Gac-042316 Gasterosteus aculeatus 29.30 5.00e-86 312.00
IUUC-Ggo-045318 Gorilla gorilla 76.25 0.00e+00 1312.00
IUUC-Hsa-046671 Homo sapiens 78.71 0.00e+00 1434.00
IUUC-Itr-047996 Ictidomys tridecemlineatus 74.84 0.00e+00 1370.00
IUUC-Lch-050461 Latimeria chalumnae 49.79 0.00e+00 841.00
IUUC-Loc-052582 Lepisosteus oculatus 45.73 0.00e+00 779.00
IUUC-Laf-054324 Loxodonta africana 78.46 0.00e+00 1414.00
IUUC-Mcc-055390 Macaca mulatta 77.74 0.00e+00 1421.00
IUUC-Meu-056365 Macropus eugenii 65.32 2.00e-132 466.00
IUUC-Mga-059205 Meleagris gallopavo 34.25 5.00e-91 328.00
IUUC-Mvi-060497 Microbotryum violaceum 30.97 4.00e-15 77.80
IUUC-Mmr-061407 Microcebus murinus 78.49 0.00e+00 1458.00
IUUC-Mdo-063079 Monodelphis domestica 32.05 1.00e-86 314.00
IUUC-Mmu-063939 Mus musculus 72.80 0.00e+00 1305.00
IUUC-Mpu-066226 Mustela putorius furo 81.01 0.00e+00 1384.00
IUUC-Mlu-068092 Myotis lucifugus 80.41 0.00e+00 1453.00
IUUC-Nfi-068405 Neosartorya fischeri 24.36 1.00e-25 112.00
IUUC-Nle-069479 Nomascus leucogenys 32.80 1.00e-80 294.00
IUUC-Opr-070246 Ochotona princeps 63.31 0.00e+00 633.00
IUUC-Ont-071702 Oreochromis niloticus 31.98 4.00e-83 302.00
IUUC-Oan-072742 Ornithorhynchus anatinus 60.61 0.00e+00 943.00
IUUC-Ocu-073959 Oryctolagus cuniculus 71.08 0.00e+00 1312.00
IUUC-Ola-086351 Oryzias latipes 33.01 2.00e-81 296.00
IUUC-Oga-089173 Otolemur garnettii 78.26 0.00e+00 1442.00
IUUC-Oar-089369 Ovis aries 81.85 0.00e+00 1513.00
IUUC-Ptr-091032 Pan troglodytes 78.71 0.00e+00 1434.00
IUUC-Pan-092383 Papio anubis 78.06 0.00e+00 1423.00
IUUC-Psi-093432 Pelodiscus sinensis 54.94 0.00e+00 999.00
IUUC-Pma-094367 Petromyzon marinus 41.40 7.00e-108 384.00
IUUC-Pfo-096401 Poecilia formosa 33.42 8.00e-89 321.00
IUUC-Pab-098416 Pongo abelii 78.27 0.00e+00 1329.00
IUUC-Pca-101006 Procavia capensis 79.75 0.00e+00 662.00
IUUC-Pva-102966 Pteropus vampyrus 81.75 0.00e+00 1499.00
IUUC-Pgr-103529 Puccinia graminis 24.80 2.00e-26 115.00
IUUC-Rno-105059 Rattus norvegicus 74.37 0.00e+00 855.00
IUUC-Sha-107622 Sarcophilus harrisii 32.37 2.00e-88 320.00
IUUC-Ssl-108450 Sclerotinia sclerotiorum 28.43 2.00e-05 45.80
IUUC-Sar-113202 Sorex araneus 66.15 0.00e+00 1000.00
IUUC-Tgu-117314 Taeniopygia guttata 52.11 0.00e+00 905.00
IUUC-Tru-118445 Takifugu rubripes 33.43 2.00e-83 303.00
IUUC-Tsy-119453 Tarsius syrichta 75.43 0.00e+00 783.00
IUUC-Tni-120711 Tetraodon nigroviridis 33.15 1.00e-87 317.00
IUUC-Tre-122194 Trichoderma reesei 24.50 2.00e-18 88.60
IUUC-Tbe-127644 Tupaia belangeri 42.98 2.00e-41 164.00
IUUC-Ttr-128421 Tursiops truncatus 79.80 0.00e+00 1227.00
IUUC-Vpa-130602 Vicugna pacos 82.40 0.00e+00 1455.00
IUUC-Xtr-131927 Xenopus tropicalis 50.27 0.00e+00 876.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved