iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090803

Ensembl Protein ID

ENSPTRP00000041030.2

UniProt Accession

H2R0P2; H2R0P2_PANTR

Genbank Protein ID

JAA07762.1; JAA16629.1; JAA29376.1; JAA38739.1

Protein Name

Nuclear transcription factor, X-box binding 1

Genbank Nucleotide ID

AACZ03066987; GABF01005516; GABD01003724; GABE01006000

Gene Name

NFX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000020858.6	ENSPTRT00000050486.2	ENSPTRP00000041030.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	100.00	0.00e+00	2198.00	IUUC-Hsa-046870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAEAPPVSGT FKFNTDAAEF IPQEKKNSGL NCGTQRRLDS NRIGRRNYSS PPPCHLSRQV 60
PYDEISAVHQ HSYHPSGSKP KSQQTSFQSS PCNKSPKSHG LQNQPWQKLR NEKHHIRVKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGCGCCAC ACAGATTTGG GCTGCGCAAC CTCTGTGGCC GTCTACACCG CGCGCAGATG 60
CGAATATTCT CGCGGCGCCG GAAGTCCGGA GCACGTGACC TGGTGACAGT GCTGGCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR034078--NFX1_fam
IPR001374--R3H_dom
IPR034076--R3H_NF-X1
IPR019786--Zinc_finger_PHD-type_CS
IPR000967--Znf_NFX1
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING

PROSITE

PS51061--R3H
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF01424--R3H
PF01422--zf-NF-X1

SMART

SM00393--R3H
SM00184--RING
SM00438--ZnF_NFX

Gene Ontology

GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0003723--F:RNA binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001078--F:transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008270--F:zinc ion binding
GO:0045347--P:negative regulation of MHC class II biosynthetic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0006366--P:transcription from RNA polymerase II promoter

KEGG

ptr:465042

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000224	Aegilops tauschii	38.52	8.00e-84	305.00
IUUC-Aml-001716	Ailuropoda melanoleuca	92.24	0.00e+00	2036.00
IUUC-Atr-002895	Amborella trichopoda	38.96	1.00e-135	478.00
IUUC-Apl-003650	Anas platyrhynchos	59.12	0.00e+00	1188.00
IUUC-Aca-004313	Anolis carolinensis	58.47	0.00e+00	1254.00
IUUC-Aly-006515	Arabidopsis lyrata	38.73	8.00e-132	464.00
IUUC-Ath-007056	Arabidopsis thaliana	36.65	8.00e-131	461.00
IUUC-Ago-007777	Ashbya gossypii	32.07	3.00e-88	319.00
IUUC-Acl-008068	Aspergillus clavatus	35.26	4.00e-81	296.00
IUUC-Afl-008499	Aspergillus flavus	36.16	2.00e-47	183.00
IUUC-Afu-009016	Aspergillus fumigatus	34.80	6.00e-109	389.00
IUUC-Ani-009477	Aspergillus nidulans	35.37	3.00e-114	406.00
IUUC-Ang-009605	Aspergillus niger	35.85	2.00e-115	410.00
IUUC-Aor-010166	Aspergillus oryzae	34.94	4.00e-53	202.00
IUUC-Ame-010640	Astyanax mexicanus	62.36	0.00e+00	973.00
IUUC-Bgr-012024	Blumeria graminis	31.75	2.00e-99	357.00
IUUC-Bta-012789	Bos taurus	90.18	0.00e+00	2003.00
IUUC-Bci-013768	Botrytis cinerea	35.26	2.00e-113	404.00
IUUC-Bdi-014723	Brachypodium distachyon	39.24	5.00e-120	425.00
IUUC-Bol-015394	Brassica oleracea	37.52	4.00e-136	479.00
IUUC-Bra-017266	Brassica rapa	35.52	2.00e-134	473.00
IUUC-Cel-018668	Caenorhabditis elegans	40.81	9.00e-153	534.00
IUUC-Cja-019769	Callithrix jacchus	93.96	0.00e+00	2055.00
IUUC-Cfa-020727	Canis familiaris	92.35	0.00e+00	2031.00
IUUC-Cpo-021741	Cavia porcellus	90.98	0.00e+00	2008.00
IUUC-Csa-024054	Chlorocebus sabaeus	98.21	0.00e+00	2155.00
IUUC-Cho-025031	Choloepus hoffmanni	86.29	0.00e+00	1362.00
IUUC-Cin-025164	Ciona intestinalis	49.53	0.00e+00	661.00
IUUC-Csv-026260	Ciona savignyi	48.63	0.00e+00	700.00
IUUC-Cgl-026451	Colletotrichum gloeosporioides	35.98	2.00e-80	293.00
IUUC-Cne-026923	Cryptococcus neoformans	36.03	3.00e-79	290.00
IUUC-Dre-028227	Danio rerio	65.57	0.00e+00	1033.00
IUUC-Dno-029830	Dasypus novemcinctus	86.92	0.00e+00	1916.00
IUUC-Dor-030436	Dipodomys ordii	85.38	0.00e+00	1104.00
IUUC-Dse-031485	Dothistroma septosporum	34.80	1.00e-106	381.00
IUUC-Dme-031875	Drosophila melanogaster	44.14	3.00e-163	569.00
IUUC-Eca-033415	Equus caballus	88.73	0.00e+00	1122.00
IUUC-Eeu-034528	Erinaceus europaeus	89.15	0.00e+00	1030.00
IUUC-Fca-036238	Felis catus	94.86	0.00e+00	1353.00
IUUC-Fal-037124	Ficedula albicollis	60.44	0.00e+00	1246.00
IUUC-Fox-038075	Fusarium oxysporum	41.46	6.00e-05	43.10
IUUC-Fso-038310	Fusarium solani	34.50	6.00e-97	348.00
IUUC-Gmo-039506	Gadus morhua	65.04	0.00e+00	975.00
IUUC-Ggr-039984	Gaeumannomyces graminis	36.00	2.00e-121	430.00
IUUC-Gga-040674	Gallus gallus	74.12	0.00e+00	1100.00
IUUC-Gac-041416	Gasterosteus aculeatus	64.38	0.00e+00	968.00
IUUC-Gma-043625	Glycine max	39.31	3.00e-128	453.00
IUUC-Ggo-045017	Gorilla gorilla	99.29	0.00e+00	2184.00
IUUC-Hsa-046870	Homo sapiens	100.00	0.00e+00	2198.00
IUUC-Hvu-047466	Hordeum vulgare	37.92	1.00e-78	287.00
IUUC-Itr-048703	Ictidomys tridecemlineatus	84.16	0.00e+00	708.00
IUUC-Kpa-049244	Komagataella pastoris	30.98	2.00e-73	270.00
IUUC-Lch-050376	Latimeria chalumnae	59.01	0.00e+00	1187.00
IUUC-Lpe-050955	Leersia perrieri	36.65	3.00e-96	346.00
IUUC-Loc-051948	Lepisosteus oculatus	55.60	0.00e+00	1146.00
IUUC-Lma-052950	Leptosphaeria maculans	35.97	1.00e-102	367.00
IUUC-Laf-054206	Loxodonta africana	89.23	0.00e+00	1293.00
IUUC-Mcc-055005	Macaca mulatta	98.12	0.00e+00	2154.00
IUUC-Meu-056120	Macropus eugenii	60.66	0.00e+00	695.00
IUUC-Mor-057238	Magnaporthe oryzae	34.23	2.00e-112	400.00
IUUC-Mpo-057574	Magnaporthe poae	35.83	3.00e-119	422.00
IUUC-Mtr-057823	Medicago truncatula	39.92	4.00e-117	416.00
IUUC-Mla-058822	Melampsora laricipopulina	34.49	2.00e-99	357.00
IUUC-Mga-059785	Meleagris gallopavo	50.34	5.00e-170	591.00
IUUC-Mvi-060543	Microbotryum violaceum	34.52	5.00e-99	355.00
IUUC-Mmr-060611	Microcebus murinus	91.79	0.00e+00	1995.00
IUUC-Mdo-062719	Monodelphis domestica	70.83	0.00e+00	1493.00
IUUC-Mmu-064376	Mus musculus	88.21	0.00e+00	1897.00
IUUC-Mac-064834	Musa acuminata	35.79	9.00e-105	374.00
IUUC-Mpu-066298	Mustela putorius furo	92.32	0.00e+00	2036.00
IUUC-Mlu-067546	Myotis lucifugus	88.90	0.00e+00	1982.00
IUUC-Nfi-068388	Neosartorya fischeri	35.09	1.00e-113	404.00
IUUC-Ncr-068875	Neurospora crassa	34.35	5.00e-104	372.00
IUUC-Nle-069813	Nomascus leucogenys	98.48	0.00e+00	2171.00
IUUC-Opr-070995	Ochotona princeps	86.45	0.00e+00	1349.00
IUUC-Ont-072084	Oreochromis niloticus	67.14	0.00e+00	1026.00
IUUC-Oan-073545	Ornithorhynchus anatinus	57.42	0.00e+00	1163.00
IUUC-Ocu-074092	Oryctolagus cuniculus	87.41	0.00e+00	1922.00
IUUC-Oba-075828	Oryza barthii	37.43	1.00e-100	361.00
IUUC-Obr-076373	Oryza brachyantha	36.73	2.00e-76	280.00
IUUC-Ogl-077043	Oryza glaberrima	38.91	2.00e-111	397.00
IUUC-Ogu-078647	Oryza glumaepatula	38.77	2.00e-109	390.00
IUUC-Oin-079793	Oryza indica	37.41	6.00e-82	298.00
IUUC-Olo-080815	Oryza longistaminata	37.64	4.00e-101	363.00
IUUC-Ome-081650	Oryza meridionalis	38.66	1.00e-112	401.00
IUUC-Oni-082708	Oryza nivara	38.66	6.00e-113	402.00
IUUC-Opu-084078	Oryza punctata	39.04	6.00e-110	392.00
IUUC-Oru-084549	Oryza rufipogon	38.48	7.00e-113	402.00
IUUC-Osa-086095	Oryza sativa	36.73	5.00e-94	338.00
IUUC-Olu-087617	Ostreococcus lucimarinus	28.18	8.00e-10	58.90
IUUC-Oga-088453	Otolemur garnettii	90.09	0.00e+00	1952.00
IUUC-Oar-089769	Ovis aries	89.92	0.00e+00	1992.00
IUUC-Pan-092169	Papio anubis	98.12	0.00e+00	2176.00
IUUC-Psi-094065	Pelodiscus sinensis	62.63	0.00e+00	1372.00
IUUC-Pma-094592	Petromyzon marinus	56.95	0.00e+00	876.00
IUUC-Pno-095016	Phaeosphaeria nodorum	37.84	6.00e-15	75.10
IUUC-Ppa-095597	Physcomitrella patens	36.98	1.00e-125	444.00
IUUC-Pfo-096959	Poecilia formosa	65.47	0.00e+00	1045.00
IUUC-Pab-097732	Pongo abelii	99.71	0.00e+00	1325.00
IUUC-Pop-099062	Populus trichocarpa	39.13	4.00e-132	466.00
IUUC-Pca-100219	Procavia capensis	74.35	0.00e+00	1521.00
IUUC-Ppe-101695	Prunus persica	40.13	3.00e-125	442.00
IUUC-Pva-102402	Pteropus vampyrus	83.57	0.00e+00	1802.00
IUUC-Pgr-103317	Puccinia graminis	30.09	2.00e-92	334.00
IUUC-Ptt-103771	Puccinia triticina	30.49	7.00e-83	302.00
IUUC-Pte-104189	Pyrenophora teres	29.69	2.00e-09	57.00
IUUC-Pyt-104801	Pyrenophora triticirepentis	35.26	3.00e-102	366.00
IUUC-Rno-105721	Rattus norvegicus	88.30	0.00e+00	1929.00
IUUC-Sce-106350	Saccharomyces cerevisiae	31.15	5.00e-83	302.00
IUUC-Sha-106801	Sarcophilus harrisii	69.52	0.00e+00	1484.00
IUUC-Sja-107692	Schizosaccharomyces japonicus	36.71	2.00e-120	427.00
IUUC-Spo-108253	Schizosaccharomyces pombe	36.50	4.00e-119	422.00
IUUC-Ssl-108587	Sclerotinia sclerotiorum	35.52	1.00e-64	241.00
IUUC-Smo-108865	Selaginella moellendorffii	39.51	2.00e-114	406.00
IUUC-Sit-110153	Setaria italica	38.71	1.00e-116	414.00
IUUC-Sly-111638	Solanum lycopersicum	39.38	6.00e-127	448.00
IUUC-Stu-112099	Solanum tuberosum	39.66	4.00e-128	452.00
IUUC-Sar-113030	Sorex araneus	85.93	0.00e+00	669.00
IUUC-Sbi-113944	Sorghum bicolor	38.13	8.00e-119	421.00
IUUC-Sre-115206	Sporisorium reilianum	34.15	4.00e-107	382.00
IUUC-Ssc-115729	Sus scrofa	87.09	0.00e+00	776.00
IUUC-Tgu-117520	Taeniopygia guttata	67.13	0.00e+00	1001.00
IUUC-Tru-118487	Takifugu rubripes	65.79	0.00e+00	1021.00
IUUC-Tsy-119363	Tarsius syrichta	84.55	0.00e+00	1804.00
IUUC-Tca-121813	Theobroma cacao	37.89	5.00e-126	445.00
IUUC-Tre-122248	Trichoderma reesei	35.39	4.00e-102	365.00
IUUC-Tvi-122462	Trichoderma virens	36.15	4.00e-110	392.00
IUUC-Tae-123637	Triticum aestivum	38.95	3.00e-112	400.00
IUUC-Tur-126173	Triticum urartu	38.72	4.00e-102	366.00
IUUC-Tme-127213	Tuber melanosporum	35.84	1.00e-113	404.00
IUUC-Tbe-127399	Tupaia belangeri	90.06	0.00e+00	832.00
IUUC-Ttr-128798	Tursiops truncatus	93.39	0.00e+00	916.00
IUUC-Uma-129421	Ustilago maydis	32.82	5.00e-105	375.00
IUUC-Vda-129863	Verticillium dahliae	32.60	5.00e-100	359.00
IUUC-Vvi-131615	Vitis vinifera	37.73	3.00e-139	489.00
IUUC-Xtr-132309	Xenopus tropicalis	59.42	0.00e+00	1181.00
IUUC-Xma-133235	Xiphophorus maculatus	64.97	0.00e+00	1003.00
IUUC-Yli-134536	Yarrowia lipolytica	31.46	1.00e-90	327.00
IUUC-Zma-135358	Zea mays	37.99	1.00e-112	401.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence