iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048295

Ensembl Protein ID

ENSSTOP00000023147.1

UniProt Accession

I3NFK0; I3NFK0_ICTTR

Genbank Protein ID

ENSSTOP00000023147

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01059202

Gene Name

RAD23B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000022304.1	ENSSTOT00000029289.1	ENSSTOP00000023147.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-19	69.4	190	227
ULD/UDP/UBQ/UBQ_PIM	2.60e-27	94.6	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e ++ ++++MG++re+++ aLra++nn+++AveyLl 
   Q: 190  YENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLM 227
           5789********************************95 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           m++t+ktl++++f++++++++tv++lKeki++e+g   +p++ qkLIyaGkiL+Ddt L+e++i+++++v+++v+k+k
   Q: 1    MQVTLKTLQQQTFKIDIDPEETVKALKEKIESEKGkdaFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPK 78
           99*************************************************************************997 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MQVTLKTLQQ QTFKIDIDPE ETVKALKEKI ESEKGKDAFP VAGQKLIYAG KILNDDTALK 60
EYKIDEKNFV VVMVTKPKTV TTPAPAPTQQ SSSATTTTVS SSTAPAVTQA PTPTPALAPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGAAACCCC GAGGGCCACC GACGCCCGCG GTGTACGCTT GCGCACACCC GATCCCGGCC 60
TCCAACATTC CAGAGCCGCC AGCGGCCCCA CCCCCAGTTC CGGGGCGGAG TTTCTGGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0071942--C:XPC complex
GO:0003684--F:damaged DNA binding
GO:0000715--P:nucleotide-excision repair, DNA damage recognition
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0032434--P:regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0007283--P:spermatogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	91.70	6.00e-89	320.00
IUUC-Atr-003116	Amborella trichopoda	37.65	9.00e-32	130.00
IUUC-Apl-003371	Anas platyrhynchos	72.99	6.00e-116	410.00
IUUC-Aca-004599	Anolis carolinensis	80.62	1.00e-92	333.00
IUUC-Ath-006674	Arabidopsis thaliana	38.82	3.00e-39	155.00
IUUC-Ago-007830	Ashbya gossypii	25.91	6.00e-15	75.10
IUUC-Acl-008212	Aspergillus clavatus	44.93	4.00e-19	88.60
IUUC-Afl-008605	Aspergillus flavus	44.12	1.00e-19	90.50
IUUC-Afu-008877	Aspergillus fumigatus	44.20	9.00e-19	87.40
IUUC-Aor-010032	Aspergillus oryzae	44.12	2.00e-19	89.40
IUUC-Ate-010458	Aspergillus terreus	37.26	5.00e-29	121.00
IUUC-Ame-011107	Astyanax mexicanus	67.96	1.00e-33	136.00
IUUC-Bta-012922	Bos taurus	94.47	2.00e-90	325.00
IUUC-Bdi-014355	Brachypodium distachyon	31.79	4.00e-45	174.00
IUUC-Bol-015272	Brassica oleracea	35.19	1.00e-54	206.00
IUUC-Cja-018772	Callithrix jacchus	90.71	1.00e-133	469.00
IUUC-Cfa-020683	Canis familiaris	81.42	3.00e-127	447.00
IUUC-Cpo-022145	Cavia porcellus	89.98	3.00e-134	471.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	36.87	1.00e-29	124.00
IUUC-Csa-023714	Chlorocebus sabaeus	92.42	3.00e-145	507.00
IUUC-Cho-024814	Choloepus hoffmanni	60.88	5.00e-95	340.00
IUUC-Cin-025741	Ciona intestinalis	40.83	5.00e-35	141.00
IUUC-Csv-025823	Ciona savignyi	40.51	3.00e-42	164.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	52.00	9.00e-17	80.50
IUUC-Cne-027056	Cryptococcus neoformans	47.44	1.00e-15	77.40
IUUC-Cme-027260	Cyanidioschyzon merolae	27.59	1.00e-24	107.00
IUUC-Dre-028369	Danio rerio	71.37	1.00e-81	296.00
IUUC-Dno-029543	Dasypus novemcinctus	88.26	6.00e-130	456.00
IUUC-Dse-031336	Dothistroma septosporum	47.41	1.00e-17	84.00
IUUC-Ete-032583	Echinops telfairi	81.70	6.00e-65	240.00
IUUC-Eca-034243	Equus caballus	94.89	4.00e-89	321.00
IUUC-Eeu-034721	Erinaceus europaeus	87.96	4.00e-71	261.00
IUUC-Fca-035679	Felis catus	91.44	4.00e-127	447.00
IUUC-Fal-037148	Ficedula albicollis	81.89	6.00e-88	317.00
IUUC-Fox-037960	Fusarium oxysporum	43.28	7.00e-16	77.80
IUUC-Fso-038107	Fusarium solani	52.63	1.00e-16	80.90
IUUC-Ggr-040116	Gaeumannomyces graminis	46.27	3.00e-16	79.30
IUUC-Gga-040544	Gallus gallus	73.47	3.00e-120	424.00
IUUC-Gma-043835	Glycine max	35.71	7.00e-38	150.00
IUUC-Ggo-045125	Gorilla gorilla	96.27	5.00e-95	340.00
IUUC-Hsa-046519	Homo sapiens	96.27	5.00e-95	340.00
IUUC-Kpa-049314	Komagataella pastoris	36.13	4.00e-29	121.00
IUUC-Lch-050553	Latimeria chalumnae	72.56	1.00e-73	270.00
IUUC-Lpe-051168	Leersia perrieri	37.24	3.00e-35	141.00
IUUC-Loc-051748	Lepisosteus oculatus	74.48	9.00e-75	273.00
IUUC-Lma-053328	Leptosphaeria maculans	48.68	1.00e-13	67.00
IUUC-Laf-054293	Loxodonta africana	92.76	2.00e-118	418.00
IUUC-Mcc-055600	Macaca mulatta	94.36	1.00e-99	355.00
IUUC-Meu-056082	Macropus eugenii	66.18	1.00e-68	253.00
IUUC-Mor-057287	Magnaporthe oryzae	50.00	2.00e-16	79.70
IUUC-Mpo-057609	Magnaporthe poae	46.51	1.00e-15	76.60
IUUC-Mla-058961	Melampsora laricipopulina	45.11	1.00e-25	110.00
IUUC-Mga-060060	Meleagris gallopavo	42.07	7.00e-28	117.00
IUUC-Mvi-060220	Microbotryum violaceum	42.86	2.00e-21	97.10
IUUC-Mmr-061159	Microcebus murinus	94.21	2.00e-93	335.00
IUUC-Mdo-061967	Monodelphis domestica	82.77	8.00e-119	419.00
IUUC-Mmu-063258	Mus musculus	85.37	1.00e-137	482.00
IUUC-Mpu-066389	Mustela putorius furo	92.12	3.00e-89	322.00
IUUC-Mlu-067999	Myotis lucifugus	88.43	2.00e-112	398.00
IUUC-Nfi-068390	Neosartorya fischeri	44.20	9.00e-19	87.40
IUUC-Ncr-068685	Neurospora crassa	44.78	3.00e-24	105.00
IUUC-Nle-069655	Nomascus leucogenys	91.93	1.00e-138	485.00
IUUC-Opr-070234	Ochotona princeps	85.80	3.00e-27	115.00
IUUC-Ont-072484	Oreochromis niloticus	55.53	6.00e-102	363.00
IUUC-Ocu-074831	Oryctolagus cuniculus	82.93	1.00e-128	452.00
IUUC-Obr-076660	Oryza brachyantha	36.51	8.00e-36	144.00
IUUC-Ogl-077067	Oryza glaberrima	33.73	5.00e-51	194.00
IUUC-Ogu-078101	Oryza glumaepatula	34.73	3.00e-33	135.00
IUUC-Oin-079203	Oryza indica	33.02	3.00e-51	195.00
IUUC-Ome-081652	Oryza meridionalis	34.73	3.00e-33	135.00
IUUC-Opu-083963	Oryza punctata	36.67	1.00e-35	143.00
IUUC-Osa-085951	Oryza sativa	33.02	3.00e-51	195.00
IUUC-Ola-086540	Oryzias latipes	62.35	1.00e-63	236.00
IUUC-Olu-087843	Ostreococcus lucimarinus	43.23	1.00e-38	153.00
IUUC-Oga-088023	Otolemur garnettii	86.20	2.00e-131	461.00
IUUC-Oar-089964	Ovis aries	94.89	2.00e-88	319.00
IUUC-Ptr-091165	Pan troglodytes	96.27	9.00e-95	340.00
IUUC-Pan-092009	Papio anubis	91.75	2.00e-138	484.00
IUUC-Psi-093477	Pelodiscus sinensis	84.87	1.00e-82	299.00
IUUC-Pno-095064	Phaeosphaeria nodorum	47.37	7.00e-15	74.30
IUUC-Ppa-095964	Physcomitrella patens	43.61	1.00e-27	117.00
IUUC-Pfo-097385	Poecilia formosa	63.45	9.00e-70	256.00
IUUC-Pab-097868	Pongo abelii	96.27	2.00e-94	338.00
IUUC-Pop-099774	Populus trichocarpa	36.61	4.00e-37	147.00
IUUC-Pca-100652	Procavia capensis	93.00	5.00e-66	244.00
IUUC-Pva-102137	Pteropus vampyrus	94.61	5.00e-93	334.00
IUUC-Ptt-103717	Puccinia triticina	44.36	2.00e-25	109.00
IUUC-Pte-104303	Pyrenophora teres	50.00	4.00e-20	92.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	49.64	6.00e-20	91.30
IUUC-Rno-104844	Rattus norvegicus	87.26	2.00e-139	488.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.77	3.00e-13	68.90
IUUC-Sha-107073	Sarcophilus harrisii	82.56	1.00e-106	379.00
IUUC-Spo-108298	Schizosaccharomyces pombe	41.63	1.00e-36	146.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.75	3.00e-17	82.00
IUUC-Sly-111480	Solanum lycopersicum	35.53	4.00e-57	214.00
IUUC-Stu-112054	Solanum tuberosum	34.66	3.00e-51	195.00
IUUC-Sar-112925	Sorex araneus	83.52	4.00e-81	294.00
IUUC-Ssc-116329	Sus scrofa	92.91	1.00e-129	455.00
IUUC-Tgu-116918	Taeniopygia guttata	81.89	7.00e-88	317.00
IUUC-Tru-118651	Takifugu rubripes	53.62	2.00e-97	349.00
IUUC-Tsy-118836	Tarsius syrichta	97.79	7.00e-49	187.00
IUUC-Tvi-122617	Trichoderma virens	52.56	2.00e-18	86.70
IUUC-Tae-125620	Triticum aestivum	37.86	6.00e-35	140.00
IUUC-Tme-127092	Tuber melanosporum	35.47	3.00e-27	115.00
IUUC-Tbe-127493	Tupaia belangeri	80.30	1.00e-65	243.00
IUUC-Ttr-128464	Tursiops truncatus	92.48	3.00e-93	335.00
IUUC-Uma-129484	Ustilago maydis	53.06	2.00e-11	63.20
IUUC-Vda-129946	Verticillium dahliae	47.01	8.00e-18	84.30
IUUC-Vpa-130357	Vicugna pacos	87.43	5.00e-85	307.00
IUUC-Vvi-130842	Vitis vinifera	35.36	8.00e-38	150.00
IUUC-Xtr-132679	Xenopus tropicalis	82.79	1.00e-69	256.00
IUUC-Xma-133503	Xiphophorus maculatus	55.45	9.00e-104	370.00
IUUC-Yli-134615	Yarrowia lipolytica	41.67	2.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence