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Tag Content
iUUCD ID IUUC-Sbi-114274
Ensembl Protein ID Sb02g032890.1
UniProt Accession C5X8F5; C5X8F5_SORBI
Genbank Protein ID EER97191.1
Protein Name Ubiquitin-related modifier 1 homolog
Genbank Nucleotide ID CM000761
Gene Name SORBI_002G298300
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g032890 Sb02g032890.1 Sb02g032890.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 42.25 7.00e-12 63.20 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sorghum bicolor
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MHLTLEFGGG LELLLENSTK VHKVEITTSK DGQGKVTTPK EGQDKVTMKS LLSWVKDNLI 60
KERPEMFVKG DSVRPGVLVL VNDCDWELCG GLDAELEEKD VVVFISTLHG G 111
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Protein Fasta Sequence


>IUUC-Sbi-114274|ULD,UBQ_Other|Sorghum bicolor
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Nucleotide Sequence
(Fasta)
ATGCATCTCA CTCTCGAGTT CGGGTAATCC TTCTCCCTGG ACCTGTCACT TTCCCCACTG 60
GATTCCTCTC GCCTTTGTGC GTAGCGCTGC GCTCCCGCGG TCCCTGACGA ATATGAGGTT 120
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Nucleotide Fasta Sequence


>IUUC-Sbi-114274|ULD,UBQ_Other|Sorghum bicolor
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
KEGG sbi:SORBI_02g032890
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 49.55 4.00e-26 108.00
IUUC-Atr-003089 Amborella trichopoda 63.96 1.00e-36 143.00
IUUC-Apl-003382 Anas platyrhynchos 48.57 1.00e-23 99.80
IUUC-Aca-004981 Anolis carolinensis 51.38 1.00e-26 110.00
IUUC-Aly-005517 Arabidopsis lyrata 65.38 2.00e-31 125.00
IUUC-Ath-006718 Arabidopsis thaliana 65.26 2.00e-30 122.00
IUUC-Ago-007917 Ashbya gossypii 34.21 5.00e-14 68.20
IUUC-Acl-008054 Aspergillus clavatus 56.00 9.00e-13 63.50
IUUC-Afl-008704 Aspergillus flavus 45.35 1.00e-15 73.60
IUUC-Aor-009890 Aspergillus oryzae 42.11 3.00e-18 82.40
IUUC-Bta-012448 Bos taurus 50.45 1.00e-26 109.00
IUUC-Bci-013865 Botrytis cinerea 39.29 4.00e-17 78.60
IUUC-Bdi-014980 Brachypodium distachyon 76.60 5.00e-35 138.00
IUUC-Bol-016055 Brassica oleracea 60.00 2.00e-28 115.00
IUUC-Bra-016845 Brassica rapa 60.00 2.00e-28 115.00
IUUC-Cel-018485 Caenorhabditis elegans 33.63 8.00e-11 57.40
IUUC-Cja-019587 Callithrix jacchus 48.65 5.00e-26 108.00
IUUC-Cfa-020653 Canis familiaris 49.55 2.00e-26 109.00
IUUC-Cpo-021622 Cavia porcellus 48.65 5.00e-26 108.00
IUUC-Cre-023015 Chlamydomonas reinhardtii 48.60 7.00e-26 107.00
IUUC-Csa-023756 Chlorocebus sabaeus 46.07 2.00e-17 80.50
IUUC-Cgl-026518 Colletotrichum gloeosporioides 36.28 2.00e-14 70.10
IUUC-Cne-026953 Cryptococcus neoformans 49.55 1.00e-24 104.00
IUUC-Cme-027314 Cyanidioschyzon merolae 42.73 4.00e-18 81.60
IUUC-Dre-027884 Danio rerio 52.29 2.00e-27 112.00
IUUC-Dno-029262 Dasypus novemcinctus 45.56 1.00e-17 81.60
IUUC-Dor-030601 Dipodomys ordii 57.81 3.00e-16 75.50
IUUC-Dme-031893 Drosophila melanogaster 45.95 1.00e-23 99.80
IUUC-Ete-032773 Echinops telfairi 48.62 3.00e-25 105.00
IUUC-Eca-034187 Equus caballus 47.75 6.00e-26 107.00
IUUC-Eeu-034808 Erinaceus europaeus 47.75 8.00e-26 107.00
IUUC-Fca-036107 Felis catus 48.65 7.00e-26 107.00
IUUC-Fal-036607 Ficedula albicollis 46.67 8.00e-23 97.10
IUUC-Fox-037698 Fusarium oxysporum 35.96 3.00e-15 72.40
IUUC-Gmo-039492 Gadus morhua 54.13 5.00e-27 111.00
IUUC-Ggr-039965 Gaeumannomyces graminis 34.55 2.00e-13 67.80
IUUC-Gga-041268 Gallus gallus 48.62 1.00e-25 106.00
IUUC-Gac-042111 Gasterosteus aculeatus 51.38 6.00e-27 111.00
IUUC-Gma-043240 Glycine max 64.21 1.00e-29 120.00
IUUC-Ggo-045176 Gorilla gorilla 46.59 2.00e-11 60.80
IUUC-Hsa-046077 Homo sapiens 48.65 5.00e-20 87.80
IUUC-Itr-048111 Ictidomys tridecemlineatus 70.00 3.00e-18 82.00
IUUC-Kpa-049157 Komagataella pastoris 34.23 7.00e-14 67.80
IUUC-Lch-049889 Latimeria chalumnae 52.29 4.00e-25 105.00
IUUC-Lpe-050783 Leersia perrieri 74.19 7.00e-35 137.00
IUUC-Loc-052400 Lepisosteus oculatus 52.29 5.00e-27 111.00
IUUC-Lma-053259 Leptosphaeria maculans 40.00 3.00e-15 72.40
IUUC-Laf-053596 Loxodonta africana 49.56 4.00e-25 105.00
IUUC-Mcc-054845 Macaca mulatta 50.52 7.00e-25 103.00
IUUC-Meu-055968 Macropus eugenii 47.71 1.00e-25 107.00
IUUC-Mor-057126 Magnaporthe oryzae 35.40 2.00e-13 67.00
IUUC-Mpo-057311 Magnaporthe poae 33.93 7.00e-14 68.60
IUUC-Mtr-058266 Medicago truncatula 64.21 4.00e-30 121.00
IUUC-Mla-058847 Melampsora laricipopulina 37.17 9.00e-10 54.70
IUUC-Mga-059468 Meleagris gallopavo 47.62 8.00e-24 100.00
IUUC-Mvi-060235 Microbotryum violaceum 32.21 2.00e-15 73.90
IUUC-Mdo-061948 Monodelphis domestica 47.71 2.00e-25 106.00
IUUC-Mmu-063946 Mus musculus 50.47 1.00e-25 106.00
IUUC-Mac-064812 Musa acuminata 68.42 2.00e-33 132.00
IUUC-Mpu-066763 Mustela putorius furo 47.75 5.00e-26 107.00
IUUC-Mlu-066970 Myotis lucifugus 44.94 2.00e-17 79.30
IUUC-Ncr-068824 Neurospora crassa 38.18 4.00e-15 72.00
IUUC-Nle-069849 Nomascus leucogenys 46.59 1.00e-17 81.30
IUUC-Opr-070227 Ochotona princeps 48.65 5.00e-26 108.00
IUUC-Ont-072530 Oreochromis niloticus 55.05 1.00e-27 113.00
IUUC-Oan-073191 Ornithorhynchus anatinus 56.58 4.00e-23 98.20
IUUC-Ocu-074460 Oryctolagus cuniculus 48.65 7.00e-26 107.00
IUUC-Oba-075499 Oryza barthii 74.47 3.00e-35 139.00
IUUC-Obr-076896 Oryza brachyantha 73.40 1.00e-34 138.00
IUUC-Ogl-077834 Oryza glaberrima 74.47 3.00e-35 138.00
IUUC-Ogu-078622 Oryza glumaepatula 74.47 3.00e-35 138.00
IUUC-Oin-079358 Oryza indica 74.47 3.00e-35 140.00
IUUC-Olo-081035 Oryza longistaminata 73.83 6.00e-40 155.00
IUUC-Oni-082425 Oryza nivara 74.47 3.00e-35 138.00
IUUC-Opu-083461 Oryza punctata 72.63 2.00e-34 137.00
IUUC-Oru-084875 Oryza rufipogon 83.10 2.00e-29 119.00
IUUC-Oga-089128 Otolemur garnettii 47.75 4.00e-26 108.00
IUUC-Oar-089896 Ovis aries 50.45 1.00e-26 109.00
IUUC-Ptr-091618 Pan troglodytes 46.59 2.00e-11 60.50
IUUC-Pan-092238 Papio anubis 46.07 2.00e-17 80.50
IUUC-Psi-093879 Pelodiscus sinensis 49.55 2.00e-26 108.00
IUUC-Pma-094484 Petromyzon marinus 64.06 1.00e-22 97.10
IUUC-Ppa-095801 Physcomitrella patens 63.83 1.00e-28 117.00
IUUC-Pfo-097192 Poecilia formosa 52.34 3.00e-26 108.00
IUUC-Pab-098203 Pongo abelii 48.65 5.00e-20 88.20
IUUC-Pop-099614 Populus trichocarpa 65.26 4.00e-30 121.00
IUUC-Pca-100507 Procavia capensis 46.07 1.00e-17 79.70
IUUC-Ppe-101174 Prunus persica 65.77 8.00e-36 140.00
IUUC-Pva-102735 Pteropus vampyrus 46.85 8.00e-24 100.00
IUUC-Pgr-103510 Puccinia graminis 36.52 3.00e-10 56.20
IUUC-Ptt-103918 Puccinia triticina 37.39 3.00e-10 55.80
IUUC-Pte-104173 Pyrenophora teres 38.18 4.00e-17 78.60
IUUC-Pyt-104806 Pyrenophora triticirepentis 38.18 3.00e-17 79.30
IUUC-Rno-105820 Rattus norvegicus 49.53 1.00e-25 106.00
IUUC-Sce-106366 Saccharomyces cerevisiae 33.63 6.00e-14 67.80
IUUC-Sja-107727 Schizosaccharomyces japonicus 40.00 3.00e-12 62.40
IUUC-Spo-108074 Schizosaccharomyces pombe 37.72 6.00e-09 51.20
IUUC-Smo-108944 Selaginella moellendorffii 53.40 1.00e-24 103.00
IUUC-Sit-110277 Setaria italica 77.89 7.00e-36 140.00
IUUC-Sly-111505 Solanum lycopersicum 75.34 1.00e-28 116.00
IUUC-Stu-112076 Solanum tuberosum 75.34 6.00e-29 117.00
IUUC-Sre-114953 Sporisorium reilianum 48.18 2.00e-20 89.40
IUUC-Ssc-115418 Sus scrofa 50.00 4.00e-26 108.00
IUUC-Tgu-117311 Taeniopygia guttata 46.67 9.00e-23 97.10
IUUC-Tru-118598 Takifugu rubripes 52.43 7.00e-24 100.00
IUUC-Tni-120109 Tetraodon nigroviridis 53.70 3.00e-23 99.00
IUUC-Tca-120942 Theobroma cacao 68.09 1.00e-30 123.00
IUUC-Tre-122099 Trichoderma reesei 39.42 1.00e-11 59.70
IUUC-Tvi-122285 Trichoderma virens 41.74 6.00e-14 68.20
IUUC-Tae-125193 Triticum aestivum 73.40 4.00e-36 141.00
IUUC-Tur-126677 Triticum urartu 66.04 7.00e-34 134.00
IUUC-Tme-127120 Tuber melanosporum 38.39 2.00e-16 76.60
IUUC-Tbe-128050 Tupaia belangeri 68.42 4.00e-12 61.60
IUUC-Ttr-129019 Tursiops truncatus 48.65 8.00e-27 110.00
IUUC-Uma-129483 Ustilago maydis 45.05 3.00e-19 85.90
IUUC-Vda-129690 Verticillium dahliae 33.87 5.00e-10 55.50
IUUC-Vvi-131174 Vitis vinifera 67.02 1.00e-31 126.00
IUUC-Xma-133862 Xiphophorus maculatus 52.34 3.00e-26 108.00
IUUC-Yli-134398 Yarrowia lipolytica 36.84 3.00e-13 65.50
IUUC-Zma-134964 Zea mays 82.11 8.00e-40 154.00
Created Date 25-Jun-2017

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