iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000109493.1	ENSMUST00000208156.1	ENSMUSP00000147061.1
ENSMUSG00000109493.1	ENSMUST00000207461.1	ENSMUSP00000146594.1

Annotation

mRNA Expression
GXD
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-09	38.8	89	121

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgt.ikvWDlr 31
           H+++v c+++  ++t ++s+s  gt i+++D+ 
   Q: 89   HQSDVACVSLnqPGTVVASASQKGTlIRLFDTQ 121
           9*********9877*****************76 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MTQQPLRGVT SLHFNQDQSC FCCAMETGVR IYNVEPLMEK GHLGLCDLCP SLEKQLLVFP 60
GHKCGSLQLV DLASTKPGTS SAPFTINAHQ SDVACVSLNQ PGTVVASASQ KGTLIRLFDT 120

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Nucleotide Sequence
(Fasta)

AAACAGCAGA GCTGGGCACC AAAGCCCGGG AGGTCAGAAA TTTGTGCCGC AGGCGGCACC 60
AACGGCTAGG GCAGGGGTCG GGGAGGGGTG ATCAAGTCGG CAGAGGTGAC GCGCATCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR004895--Prenylated_rab_accept_PRA1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF03208--PRA1
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Nle-069470	Nomascus leucogenys	92.06	6.00e-127	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence