iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074884

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02041603

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000012990.3	ENSOCUT00000022533.2	ENSOCUP00000021370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-11	43.5	466	533
E3 activity/RING/RING	3.10e-08	34.1	469	507

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawc 69
           ++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n  + +li +++
   Q: 466  DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLaqclASRKYSKNVIMEELIAKFL 533
           678*********************************9.****976643337778888888888888876 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 469  CSLCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 507
           ****999977.***************999......9*********7 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MDSFQTEQML SLPAEVGSSN LELAEPEERA ASAARVDSGP NPEPATEGPA SLPTREPEPE 60
PSPRTSTPEC KVLLKQADAL ASVGRLREAL EVYRQLSERQ QLVAEQLEQL VRCLAENVRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGAGGTGG CGCGTCACGT GGTGTCGTTT TATATAACAC TTTGCTGAGA CAAGACAGTT 60
ATTAGGCGGC GCGGGGCAGC CGGCATGGAG CTCGCGGAGG CGCGGCAGGG CCCGGCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	75.10	0.00e+00	932.00
IUUC-Apl-003916	Anas platyrhynchos	60.58	3.00e-174	604.00
IUUC-Aca-004822	Anolis carolinensis	47.01	2.00e-160	559.00
IUUC-Ani-009473	Aspergillus nidulans	31.56	1.00e-41	164.00
IUUC-Ang-009643	Aspergillus niger	28.88	1.00e-37	151.00
IUUC-Ame-010750	Astyanax mexicanus	43.45	1.00e-155	543.00
IUUC-Bta-012872	Bos taurus	84.27	0.00e+00	1089.00
IUUC-Cel-018356	Caenorhabditis elegans	30.12	4.00e-09	53.90
IUUC-Cja-018747	Callithrix jacchus	78.58	0.00e+00	989.00
IUUC-Cfa-020101	Canis familiaris	82.16	0.00e+00	1063.00
IUUC-Cpo-022041	Cavia porcellus	76.17	0.00e+00	960.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	32.00	2.00e-09	55.80
IUUC-Csa-024034	Chlorocebus sabaeus	84.67	0.00e+00	1133.00
IUUC-Cin-025668	Ciona intestinalis	45.70	5.00e-80	291.00
IUUC-Csv-026364	Ciona savignyi	45.87	2.00e-79	289.00
IUUC-Dre-028400	Danio rerio	52.56	3.00e-140	491.00
IUUC-Dno-029518	Dasypus novemcinctus	75.71	0.00e+00	959.00
IUUC-Dor-031132	Dipodomys ordii	67.37	0.00e+00	917.00
IUUC-Dse-031331	Dothistroma septosporum	32.52	4.00e-39	155.00
IUUC-Eca-033382	Equus caballus	85.19	0.00e+00	1147.00
IUUC-Fca-035777	Felis catus	77.89	0.00e+00	721.00
IUUC-Fal-036730	Ficedula albicollis	58.49	2.00e-177	615.00
IUUC-Gmo-039110	Gadus morhua	46.52	2.00e-165	575.00
IUUC-Gga-041187	Gallus gallus	55.61	0.00e+00	778.00
IUUC-Gac-042201	Gasterosteus aculeatus	47.83	1.00e-173	603.00
IUUC-Ggo-045111	Gorilla gorilla	84.93	0.00e+00	1129.00
IUUC-Hsa-045695	Homo sapiens	84.80	0.00e+00	1125.00
IUUC-Itr-048224	Ictidomys tridecemlineatus	47.45	9.00e-120	423.00
IUUC-Lch-050429	Latimeria chalumnae	51.54	0.00e+00	707.00
IUUC-Loc-051823	Lepisosteus oculatus	50.55	1.00e-178	619.00
IUUC-Lma-053145	Leptosphaeria maculans	33.04	4.00e-41	162.00
IUUC-Laf-053434	Loxodonta africana	83.55	0.00e+00	834.00
IUUC-Mcc-055249	Macaca mulatta	80.88	0.00e+00	758.00
IUUC-Meu-055901	Macropus eugenii	51.80	2.00e-99	356.00
IUUC-Mga-060131	Meleagris gallopavo	62.98	2.00e-170	592.00
IUUC-Mmr-060749	Microcebus murinus	87.96	0.00e+00	1159.00
IUUC-Mdo-062261	Monodelphis domestica	55.48	0.00e+00	731.00
IUUC-Mmu-063219	Mus musculus	78.14	0.00e+00	1024.00
IUUC-Mpu-066222	Mustela putorius furo	74.97	0.00e+00	941.00
IUUC-Mlu-067769	Myotis lucifugus	78.40	0.00e+00	1026.00
IUUC-Nle-069738	Nomascus leucogenys	86.76	0.00e+00	914.00
IUUC-Ont-072029	Oreochromis niloticus	53.08	3.00e-160	558.00
IUUC-Oan-073179	Ornithorhynchus anatinus	80.00	3.00e-168	584.00
IUUC-Ogl-077658	Oryza glaberrima	31.91	3.00e-11	62.80
IUUC-Ome-081482	Oryza meridionalis	31.37	5.00e-11	62.00
IUUC-Osa-085978	Oryza sativa	31.37	3.00e-11	62.80
IUUC-Ola-086698	Oryzias latipes	47.13	1.00e-165	576.00
IUUC-Oga-089109	Otolemur garnettii	81.48	0.00e+00	1058.00
IUUC-Oar-089903	Ovis aries	84.01	0.00e+00	1083.00
IUUC-Ptr-091238	Pan troglodytes	84.23	0.00e+00	1112.00
IUUC-Pan-092379	Papio anubis	79.39	0.00e+00	1108.00
IUUC-Psi-093418	Pelodiscus sinensis	60.26	0.00e+00	688.00
IUUC-Pma-094231	Petromyzon marinus	63.60	1.00e-109	389.00
IUUC-Pno-094889	Phaeosphaeria nodorum	39.62	5.00e-42	165.00
IUUC-Pfo-097284	Poecilia formosa	47.08	1.00e-165	576.00
IUUC-Pab-098343	Pongo abelii	79.51	0.00e+00	1103.00
IUUC-Pca-100905	Procavia capensis	77.46	0.00e+00	907.00
IUUC-Pva-102242	Pteropus vampyrus	83.27	0.00e+00	1081.00
IUUC-Pgr-103289	Puccinia graminis	25.62	5.00e-26	112.00
IUUC-Ptt-103898	Puccinia triticina	27.62	6.00e-31	128.00
IUUC-Pte-104214	Pyrenophora teres	32.24	2.00e-39	157.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	32.54	2.00e-39	156.00
IUUC-Rno-105899	Rattus norvegicus	73.93	0.00e+00	1024.00
IUUC-Sha-107565	Sarcophilus harrisii	51.22	0.00e+00	645.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	36.89	6.00e-31	128.00
IUUC-Spo-108344	Schizosaccharomyces pombe	34.01	2.00e-24	106.00
IUUC-Sar-112999	Sorex araneus	60.14	5.00e-176	610.00
IUUC-Sre-114977	Sporisorium reilianum	32.94	3.00e-36	147.00
IUUC-Ssc-115705	Sus scrofa	85.06	0.00e+00	1121.00
IUUC-Tgu-116978	Taeniopygia guttata	62.31	0.00e+00	744.00
IUUC-Tru-118016	Takifugu rubripes	44.11	3.00e-148	519.00
IUUC-Tsy-118988	Tarsius syrichta	87.60	0.00e+00	876.00
IUUC-Tni-119913	Tetraodon nigroviridis	46.43	6.00e-155	541.00
IUUC-Tbe-127563	Tupaia belangeri	71.04	1.00e-144	506.00
IUUC-Ttr-128875	Tursiops truncatus	83.49	0.00e+00	1012.00
IUUC-Uma-129541	Ustilago maydis	46.40	9.00e-30	125.00
IUUC-Vpa-130779	Vicugna pacos	97.56	1.00e-161	562.00
IUUC-Xtr-132508	Xenopus tropicalis	50.79	0.00e+00	682.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence