iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115242

Ensembl Protein ID

ENSSSCP00000011588.2

UniProt Accession

F1S8N6; F1S8N6_PIG

Genbank Protein ID

ENSSSCP00000011588

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP236465

Gene Name

MAP1LC3C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000010870.2	ENSSSCT00000011892.2	ENSSSCP00000011588.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG8	85.16	1.00e-58	222.00	IUUC-Hsa-046492

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MQTPQKSPSL RPFKQRKSLA TRREEVAGIR MKFPGKIPVI VERYPREKFL PLLDKTKFLV 60
PQELTMTQFL SIIRSRMVLG ATEAFYLLVN NRSLGSMNVT MAEIYRDHKD EDGFVYMTYA 120

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Nucleotide Sequence
(Fasta)

ATGCAGACTC CCCAGAAAAG CCCAAGCCTC AGACCCTTCA AGCAGAGGAA GAGCTTAGGT 60
AAAGTTCTCA GAGTATTTGT CTGGGTTTGG GCCCTCGAGA CAGGGAAAGA CGAGGACACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0449--Lipoprotein
KW-1185--Reference proteome

Interpro

IPR004241--Atg8-like
IPR027731--MAP1A/MAP1B_LC3C
IPR029071--Ubiquitin-rel_dom

Pfam

PF02991--Atg8

Gene Ontology

GO:0000932--C:P-body
GO:0006914--P:autophagy

KEGG

ssc:100512852

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001289	Ailuropoda melanoleuca	86.40	6.00e-61	225.00
IUUC-Apl-004191	Anas platyrhynchos	81.65	1.00e-51	193.00
IUUC-Aca-005135	Anolis carolinensis	76.56	9.00e-55	204.00
IUUC-Ame-011476	Astyanax mexicanus	71.31	1.00e-50	191.00
IUUC-Bta-012610	Bos taurus	91.30	1.00e-71	261.00
IUUC-Cja-019805	Callithrix jacchus	74.83	4.00e-58	216.00
IUUC-Cfa-020204	Canis familiaris	83.56	1.00e-66	244.00
IUUC-Csa-023481	Chlorocebus sabaeus	84.44	2.00e-62	230.00
IUUC-Csv-026146	Ciona savignyi	63.64	3.00e-43	166.00
IUUC-Dre-028789	Danio rerio	73.98	9.00e-53	198.00
IUUC-Eeu-034935	Erinaceus europaeus	78.91	1.00e-65	241.00
IUUC-Fal-036962	Ficedula albicollis	83.05	8.00e-56	208.00
IUUC-Gmo-038883	Gadus morhua	73.50	8.00e-49	184.00
IUUC-Gga-040716	Gallus gallus	74.63	8.00e-57	211.00
IUUC-Gac-042077	Gasterosteus aculeatus	66.40	1.00e-46	177.00
IUUC-Ggo-045016	Gorilla gorilla	78.91	1.00e-62	231.00
IUUC-Hsa-046492	Homo sapiens	83.70	7.00e-62	228.00
IUUC-Itr-047874	Ictidomys tridecemlineatus	83.70	2.00e-62	230.00
IUUC-Lch-050056	Latimeria chalumnae	62.40	5.00e-44	169.00
IUUC-Loc-052364	Lepisosteus oculatus	74.42	3.00e-55	206.00
IUUC-Laf-054399	Loxodonta africana	88.43	8.00e-60	221.00
IUUC-Mcc-055190	Macaca mulatta	80.74	2.00e-59	220.00
IUUC-Meu-056679	Macropus eugenii	78.17	8.00e-61	224.00
IUUC-Mga-059810	Meleagris gallopavo	82.08	2.00e-50	190.00
IUUC-Mmr-060763	Microcebus murinus	88.15	2.00e-65	240.00
IUUC-Mdo-062341	Monodelphis domestica	88.98	5.00e-59	219.00
IUUC-Mpu-066764	Mustela putorius furo	78.08	1.00e-61	228.00
IUUC-Nle-069372	Nomascus leucogenys	78.91	1.00e-62	231.00
IUUC-Opr-071191	Ochotona princeps	90.62	5.00e-64	235.00
IUUC-Ont-071635	Oreochromis niloticus	70.59	1.00e-49	187.00
IUUC-Ocu-074647	Oryctolagus cuniculus	91.11	4.00e-43	165.00
IUUC-Ola-086326	Oryzias latipes	70.59	3.00e-49	186.00
IUUC-Oga-088081	Otolemur garnettii	87.79	2.00e-63	233.00
IUUC-Oar-089786	Ovis aries	91.30	2.00e-71	260.00
IUUC-Ptr-090903	Pan troglodytes	79.59	7.00e-63	231.00
IUUC-Psi-093864	Pelodiscus sinensis	78.12	9.00e-57	211.00
IUUC-Pfo-097172	Poecilia formosa	71.55	4.00e-48	182.00
IUUC-Pab-098144	Pongo abelii	74.83	9.00e-58	214.00
IUUC-Pca-100534	Procavia capensis	84.85	3.00e-61	226.00
IUUC-Pva-102650	Pteropus vampyrus	67.46	2.00e-43	167.00
IUUC-Sha-106953	Sarcophilus harrisii	83.46	3.00e-59	219.00
IUUC-Tgu-116714	Taeniopygia guttata	79.82	2.00e-50	190.00
IUUC-Tru-118015	Takifugu rubripes	70.97	8.00e-50	188.00
IUUC-Tsy-118976	Tarsius syrichta	88.15	5.00e-66	242.00
IUUC-Tni-120132	Tetraodon nigroviridis	73.11	2.00e-50	190.00
IUUC-Tbe-127489	Tupaia belangeri	87.41	6.00e-64	235.00
IUUC-Xtr-132388	Xenopus tropicalis	75.40	2.00e-54	203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence