iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007520

UUCD1 version

UUC-ArT-00395

Ensembl Protein ID

AT5G52140.1

UniProt Accession

Q1PDK3; Q1PDK3_ARATH

Genbank Protein ID

ABE66242.1; AED96176.1

Protein Name

RING/U-box superfamily protein; Zinc finger protein-like protein

Genbank Nucleotide ID

DQ447065; CP002688

Gene Name

At5g52140; F17P19.3; F17P19_3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G52140	AT5G52140.1	AT5G52140.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	35.51	6.00e-14	75.90	IUUC-Hsa-046529
UBD/SIM/SIM	35.51	6.00e-14	75.90	IUUC-Hsa-046529

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSRLVNQSSV DENIAVYLQN ELSELTVNDY AIGREIQQQY QNKSICNDAA IALEIQKEEE 60
ACVHSCLHDD EGLARTLQDL EANLQPSLSD DEKLARYLQE HDELANNTED DIQETHHHQY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCGGC TTGTAAACCA GTCGTCTGTC GATGAAAATA TTGCAGTCTA TTTACAAAAC 60
GAGTTATCAG AACTGACGGT TAATGATTAT GCTATTGGTC GGGAGATACA ACAACAATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G52140

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001378	Ailuropoda melanoleuca	34.82	7.00e-15	75.90
IUUC-Apl-003634	Anas platyrhynchos	33.93	1.00e-14	75.10
IUUC-Aly-005415	Arabidopsis lyrata	85.36	7.00e-144	502.00
IUUC-Ame-011948	Astyanax mexicanus	36.00	9.00e-17	80.50
IUUC-Bta-012823	Bos taurus	34.82	5.00e-15	76.30
IUUC-Bol-016044	Brassica oleracea	56.10	5.00e-73	266.00
IUUC-Bra-017848	Brassica rapa	63.16	1.00e-30	125.00
IUUC-Cja-018850	Callithrix jacchus	34.21	8.00e-14	72.00
IUUC-Cpo-021467	Cavia porcellus	34.82	5.00e-15	76.30
IUUC-Dre-028365	Danio rerio	35.00	7.00e-16	77.40
IUUC-Ete-032985	Echinops telfairi	35.24	1.00e-13	72.00
IUUC-Eca-033659	Equus caballus	34.82	5.00e-15	76.30
IUUC-Eeu-034773	Erinaceus europaeus	35.24	8.00e-14	72.00
IUUC-Ggo-044921	Gorilla gorilla	34.82	5.00e-15	76.30
IUUC-Hsa-046529	Homo sapiens	34.82	6.00e-15	76.30
IUUC-Itr-048765	Ictidomys tridecemlineatus	34.82	5.00e-15	76.30
IUUC-Laf-053804	Loxodonta africana	34.82	5.00e-15	76.30
IUUC-Meu-056052	Macropus eugenii	34.82	6.00e-15	75.90
IUUC-Mga-059350	Meleagris gallopavo	33.93	1.00e-14	75.10
IUUC-Mmu-063900	Mus musculus	34.82	6.00e-15	75.90
IUUC-Mlu-067464	Myotis lucifugus	34.21	9.00e-14	72.00
IUUC-Nle-070038	Nomascus leucogenys	34.82	6.00e-15	76.30
IUUC-Opr-070924	Ochotona princeps	35.14	2.00e-14	74.30
IUUC-Ocu-074713	Oryctolagus cuniculus	34.82	5.00e-15	76.30
IUUC-Oga-088809	Otolemur garnettii	34.21	7.00e-14	72.40
IUUC-Ptr-091451	Pan troglodytes	34.82	5.00e-15	76.30
IUUC-Pan-092593	Papio anubis	34.21	7.00e-14	72.40
IUUC-Pab-097885	Pongo abelii	33.96	3.00e-13	70.50
IUUC-Pca-100561	Procavia capensis	34.82	6.00e-15	75.90
IUUC-Pva-102891	Pteropus vampyrus	34.82	6.00e-15	76.30
IUUC-Rno-105327	Rattus norvegicus	34.82	5.00e-15	76.30
IUUC-Sar-113238	Sorex araneus	34.82	7.00e-15	75.90
IUUC-Ssc-116436	Sus scrofa	34.82	5.00e-15	76.30
IUUC-Tgu-116470	Taeniopygia guttata	33.93	1.00e-14	74.70
IUUC-Vpa-130662	Vicugna pacos	34.82	6.00e-15	76.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence