iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000014984.7	ENSRNOT00000020134.6	ENSRNOP00000020134.6
ENSRNOG00000014984.7	ENSRNOT00000071916.3	ENSRNOP00000067795.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-13	49.6	327	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
            c+++ +d +++v+G+ D  + vW++++g++
   Q: 327  LCVCWsPDgRYVVTGGEDDLVTVWSFTEGRV 357
           6*****999*****************99986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAAGGAEGGP GPSAAMGDCA EIKSQFRTRE GFYKLLPGDA TRRSGPTSAQ TPAPPQPTQP 60
PPGPASASGP GAAGPASSPP PAGPGPGPAL PAVRLSLVRL GDPDGTGEPP STPSGLGAGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG GCGGCGCGGA GGGCGGCCCG GGCCCCAGCG CCGCCATGGG TGACTGCGCG 60
GAGATCAAGT CGCAGTTTCG CACCCGCGAG GGCTTCTACA AGCTGCTTCC CGGCGATGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

KEGG

rno:680252

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001329	Ailuropoda melanoleuca	77.86	0.00e+00	759.00
IUUC-Aca-004524	Anolis carolinensis	71.86	0.00e+00	716.00
IUUC-Afu-008994	Aspergillus fumigatus	36.19	2.00e-53	203.00
IUUC-Bta-013224	Bos taurus	85.98	0.00e+00	813.00
IUUC-Bci-013753	Botrytis cinerea	32.77	2.00e-51	197.00
IUUC-Bra-017842	Brassica rapa	24.02	4.00e-17	82.80
IUUC-Cja-019075	Callithrix jacchus	73.37	3.00e-173	601.00
IUUC-Cpo-022431	Cavia porcellus	79.68	0.00e+00	794.00
IUUC-Csa-023254	Chlorocebus sabaeus	88.26	0.00e+00	865.00
IUUC-Dor-030174	Dipodomys ordii	86.67	0.00e+00	648.00
IUUC-Eca-034209	Equus caballus	85.77	0.00e+00	754.00
IUUC-Ggo-044757	Gorilla gorilla	87.95	0.00e+00	820.00
IUUC-Hsa-046296	Homo sapiens	86.76	0.00e+00	860.00
IUUC-Itr-048547	Ictidomys tridecemlineatus	89.76	0.00e+00	832.00
IUUC-Lma-053071	Leptosphaeria maculans	33.43	3.00e-51	196.00
IUUC-Laf-054131	Loxodonta africana	81.49	0.00e+00	842.00
IUUC-Mcc-055695	Macaca mulatta	85.66	0.00e+00	805.00
IUUC-Meu-056033	Macropus eugenii	71.40	6.00e-177	613.00
IUUC-Mor-057249	Magnaporthe oryzae	31.99	1.00e-49	191.00
IUUC-Mvi-060521	Microbotryum violaceum	31.18	2.00e-34	140.00
IUUC-Mmr-061308	Microcebus murinus	88.24	0.00e+00	863.00
IUUC-Mmu-063595	Mus musculus	97.53	0.00e+00	948.00
IUUC-Mpu-066104	Mustela putorius furo	89.12	3.00e-171	594.00
IUUC-Mlu-066973	Myotis lucifugus	87.29	0.00e+00	738.00
IUUC-Nle-069128	Nomascus leucogenys	86.15	0.00e+00	855.00
IUUC-Oga-088515	Otolemur garnettii	85.58	0.00e+00	831.00
IUUC-Ptr-090746	Pan troglodytes	86.61	0.00e+00	859.00
IUUC-Pan-092336	Papio anubis	84.66	0.00e+00	791.00
IUUC-Psi-093025	Pelodiscus sinensis	72.60	0.00e+00	676.00
IUUC-Pab-098750	Pongo abelii	84.93	0.00e+00	822.00
IUUC-Pca-100259	Procavia capensis	85.76	0.00e+00	813.00
IUUC-Pva-102271	Pteropus vampyrus	76.56	2.00e-176	612.00
IUUC-Pte-104091	Pyrenophora teres	34.16	1.00e-49	191.00
IUUC-Pyt-104509	Pyrenophora triticirepentis	34.47	5.00e-52	199.00
IUUC-Sha-107126	Sarcophilus harrisii	76.77	0.00e+00	678.00
IUUC-Ssl-108563	Sclerotinia sclerotiorum	39.18	2.00e-37	150.00
IUUC-Sar-113582	Sorex araneus	82.78	2.00e-170	592.00
IUUC-Sre-115177	Sporisorium reilianum	28.69	3.00e-34	140.00
IUUC-Uma-129485	Ustilago maydis	39.53	6.00e-34	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence