iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-25	89.4	215	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           Ht++v +la+      ++++sGs D+++kvWD+ tg++ 
   Q: 215  HTGPVIDLAWnkefR-NIVASGSEDKKVKVWDVATGKCK 252
           9*********95543.89*******************97 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTIVALSWIP KEASKAMPVA AESPCMEEKM DDEIQNAQVT HAKSVAKSFG KSKVASSSST 60
DADEVVKFLK ELDMDNYDEE DDEIELFSSG QGHLYYPSND MDPYLKDTDG DYDSEDHDDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACGATAG TTGCACTTTC ATGGATCCCA AAAGAGGCAT CAAAGGCTAT GCCTGTTGCT 60
GCTGAATCTC CTTGTATGGA AGAAAAGATG GACGATGAAA TTCAGAATGC TCAAGTTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

ath:AT4G35370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001975	Ailuropoda melanoleuca	36.02	7.00e-58	217.00
IUUC-Apl-004171	Anas platyrhynchos	35.04	4.00e-55	207.00
IUUC-Aly-006108	Arabidopsis lyrata	69.13	4.00e-163	566.00
IUUC-Bta-012671	Bos taurus	35.16	4.00e-56	211.00
IUUC-Cel-018525	Caenorhabditis elegans	29.44	1.00e-35	143.00
IUUC-Cja-018931	Callithrix jacchus	35.73	3.00e-55	208.00
IUUC-Cfa-020421	Canis familiaris	35.57	1.00e-55	209.00
IUUC-Cpo-022066	Cavia porcellus	35.16	1.00e-58	220.00
IUUC-Csa-024120	Chlorocebus sabaeus	35.45	4.00e-56	211.00
IUUC-Cho-024765	Choloepus hoffmanni	28.61	9.00e-34	137.00
IUUC-Dno-029634	Dasypus novemcinctus	34.95	7.00e-58	217.00
IUUC-Dor-030767	Dipodomys ordii	35.69	2.00e-57	216.00
IUUC-Eca-033871	Equus caballus	33.43	3.00e-50	191.00
IUUC-Eeu-034899	Erinaceus europaeus	35.98	7.00e-57	214.00
IUUC-Fca-036260	Felis catus	35.57	1.00e-55	210.00
IUUC-Fox-037875	Fusarium oxysporum	40.00	8.00e-44	170.00
IUUC-Gac-042618	Gasterosteus aculeatus	36.14	1.00e-61	230.00
IUUC-Ggo-044778	Gorilla gorilla	35.45	1.00e-55	210.00
IUUC-Hsa-046975	Homo sapiens	35.45	7.00e-56	211.00
IUUC-Itr-048829	Ictidomys tridecemlineatus	35.73	1.00e-56	213.00
IUUC-Laf-053737	Loxodonta africana	36.02	5.00e-58	218.00
IUUC-Mcc-054770	Macaca mulatta	35.45	7.00e-56	210.00
IUUC-Mga-059434	Meleagris gallopavo	35.33	4.00e-55	208.00
IUUC-Mmr-061729	Microcebus murinus	35.45	8.00e-56	210.00
IUUC-Mdo-062905	Monodelphis domestica	34.55	4.00e-57	214.00
IUUC-Mmu-063191	Mus musculus	36.65	4.00e-63	234.00
IUUC-Mpu-066036	Mustela putorius furo	35.60	1.00e-56	213.00
IUUC-Mlu-068240	Myotis lucifugus	34.99	2.00e-55	209.00
IUUC-Nle-069444	Nomascus leucogenys	35.45	7.00e-56	211.00
IUUC-Opr-070284	Ochotona princeps	31.12	5.00e-44	171.00
IUUC-Oan-073312	Ornithorhynchus anatinus	34.17	7.00e-57	214.00
IUUC-Ocu-074548	Oryctolagus cuniculus	36.02	6.00e-57	214.00
IUUC-Oga-088626	Otolemur garnettii	35.73	2.00e-56	213.00
IUUC-Oar-089641	Ovis aries	35.33	7.00e-58	217.00
IUUC-Ptr-091379	Pan troglodytes	35.45	7.00e-56	211.00
IUUC-Pan-092669	Papio anubis	34.38	1.00e-49	190.00
IUUC-Pca-100653	Procavia capensis	32.23	1.00e-44	173.00
IUUC-Pva-103106	Pteropus vampyrus	35.28	3.00e-56	212.00
IUUC-Rno-105173	Rattus norvegicus	36.23	4.00e-59	221.00
IUUC-Ssc-115281	Sus scrofa	34.99	9.00e-56	210.00
IUUC-Tsy-119546	Tarsius syrichta	35.85	8.00e-59	220.00
IUUC-Tni-120562	Tetraodon nigroviridis	36.73	1.00e-63	236.00
IUUC-Tbe-128052	Tupaia belangeri	33.02	3.00e-46	179.00
IUUC-Ttr-129310	Tursiops truncatus	34.95	3.00e-50	192.00
IUUC-Vpa-130511	Vicugna pacos	34.95	3.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence