iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135492

UUCD1 version

UUC-ZeM-00370

Ensembl Protein ID

Zm00001d043339_T001

UniProt Accession

C4J8T3; C4J8T3_MAIZE

Genbank Protein ID

ACR37583.1; ONM37610.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

BT087230; CM007649

Gene Name

ZEAMMB73_Zm00001d043339

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d043339	Zm00001d043339_T001	Zm00001d043339_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.30e-06	28.2	46	101
E3 activity/RING/RING	2.80e-06	29.7	49	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
            f C I l+l +dPvv+ +G+ +   ++ +wl    +  +cPv+++ ++e +lvP 
   Q: 46   SFECNICLDLAQDPVVTLCGHLFCWPCLYEWLHVHAHsqECPVCKAVVEEGKLVPL 101
           599*****************************44444468**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  +d p+v+ CgH+f+  Cl+ w    ++   ++ CP+C+
   Q: 49   CNICLDLAQD-PVVTLCGHLFCWPCLYEW---LHVHAHSQECPVCK 90
           99********.9999**************...445788999****6 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSGGNAWSPL PSHGFESDSG GMGSRAGEPV ARTNSGGGSS SKDSGSFECN ICLDLAQDPV 60
VTLCGHLFCW PCLYEWLHVH AHSQECPVCK AVVEEGKLVP LYGRGGNSTS PRARSVAGVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCACGTTC ACGGTTCACC AGTCTCGTCG TGTCCGTTCG CGATCGGGCA AACCTGCAAC 60
CCTTTCCTCT TCGTCCCCCC GCTATCTCGT TGCCCCAAGC CGGAGTACGG AGTACGGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001875	Ailuropoda melanoleuca	57.14	4.00e-22	97.10
IUUC-Atr-002444	Amborella trichopoda	61.78	6.00e-51	193.00
IUUC-Apl-003744	Anas platyrhynchos	57.14	4.00e-22	95.90
IUUC-Aly-006065	Arabidopsis lyrata	58.70	6.00e-54	202.00
IUUC-Ath-007267	Arabidopsis thaliana	58.15	1.00e-53	202.00
IUUC-Bta-012734	Bos taurus	57.14	6.00e-22	96.70
IUUC-Bol-015663	Brassica oleracea	60.14	2.00e-46	177.00
IUUC-Bra-017113	Brassica rapa	52.20	8.00e-51	192.00
IUUC-Cel-018228	Caenorhabditis elegans	56.18	1.00e-27	115.00
IUUC-Cja-019136	Callithrix jacchus	57.14	4.00e-22	97.10
IUUC-Cfa-020308	Canis familiaris	57.14	4.00e-22	97.10
IUUC-Cpo-021347	Cavia porcellus	57.14	4.00e-22	97.10
IUUC-Csa-023755	Chlorocebus sabaeus	57.14	3.00e-22	97.40
IUUC-Dre-028094	Danio rerio	55.71	1.00e-21	95.50
IUUC-Dno-029402	Dasypus novemcinctus	57.14	4.00e-22	97.10
IUUC-Dor-030373	Dipodomys ordii	57.14	4.00e-22	97.10
IUUC-Dme-031966	Drosophila melanogaster	52.38	8.00e-24	103.00
IUUC-Ete-032786	Echinops telfairi	57.14	3.00e-22	97.40
IUUC-Eca-034261	Equus caballus	57.14	4.00e-22	97.10
IUUC-Eeu-034614	Erinaceus europaeus	45.71	6.00e-14	70.10
IUUC-Fca-036049	Felis catus	57.14	4.00e-22	97.10
IUUC-Fal-037085	Ficedula albicollis	57.14	6.00e-22	96.70
IUUC-Gga-040514	Gallus gallus	57.14	6.00e-22	96.70
IUUC-Ggo-044504	Gorilla gorilla	57.14	4.00e-22	97.10
IUUC-Hsa-045707	Homo sapiens	57.14	4.00e-22	97.10
IUUC-Itr-048343	Ictidomys tridecemlineatus	57.14	3.00e-22	97.40
IUUC-Lch-050658	Latimeria chalumnae	57.14	6.00e-22	96.30
IUUC-Laf-054438	Loxodonta africana	57.14	3.00e-22	97.40
IUUC-Mor-057077	Magnaporthe oryzae	42.62	7.00e-10	58.20
IUUC-Mga-059554	Meleagris gallopavo	57.14	6.00e-22	96.70
IUUC-Mmr-061662	Microcebus murinus	46.58	9.00e-14	69.30
IUUC-Mdo-062774	Monodelphis domestica	57.14	4.00e-22	97.10
IUUC-Mmu-063372	Mus musculus	57.14	1.00e-21	95.90
IUUC-Mlu-067254	Myotis lucifugus	57.14	4.00e-22	97.10
IUUC-Nle-069850	Nomascus leucogenys	57.14	4.00e-22	97.10
IUUC-Oan-073480	Ornithorhynchus anatinus	57.14	4.00e-22	97.10
IUUC-Obr-076382	Oryza brachyantha	81.32	6.00e-64	236.00
IUUC-Ogl-077553	Oryza glaberrima	78.82	3.00e-67	247.00
IUUC-Ogu-078463	Oryza glumaepatula	76.69	9.00e-60	222.00
IUUC-Oin-080177	Oryza indica	77.30	1.00e-60	225.00
IUUC-Ome-081605	Oryza meridionalis	76.07	5.00e-52	196.00
IUUC-Oni-082458	Oryza nivara	75.88	7.00e-62	230.00
IUUC-Opu-083362	Oryza punctata	71.02	1.00e-60	226.00
IUUC-Oru-084757	Oryza rufipogon	76.69	5.00e-60	223.00
IUUC-Osa-086198	Oryza sativa	75.29	3.00e-61	228.00
IUUC-Oga-088197	Otolemur garnettii	57.14	3.00e-22	97.80
IUUC-Ptr-091106	Pan troglodytes	57.14	4.00e-22	97.10
IUUC-Pan-092671	Papio anubis	57.14	3.00e-22	97.40
IUUC-Pno-094942	Phaeosphaeria nodorum	33.73	7.00e-11	60.80
IUUC-Ppa-095474	Physcomitrella patens	59.72	1.00e-44	172.00
IUUC-Pab-097845	Pongo abelii	57.14	4.00e-22	97.10
IUUC-Pop-099017	Populus trichocarpa	64.60	6.00e-54	203.00
IUUC-Pva-102298	Pteropus vampyrus	57.14	5.00e-22	97.10
IUUC-Pte-104163	Pyrenophora teres	38.10	8.00e-10	57.00
IUUC-Pyt-104640	Pyrenophora triticirepentis	36.89	1.00e-12	66.60
IUUC-Rno-105293	Rattus norvegicus	57.14	3.00e-22	97.80
IUUC-Sha-107361	Sarcophilus harrisii	57.14	3.00e-22	97.40
IUUC-Sly-111255	Solanum lycopersicum	58.54	6.00e-46	176.00
IUUC-Stu-112117	Solanum tuberosum	57.06	7.00e-45	172.00
IUUC-Ssc-116228	Sus scrofa	57.14	4.00e-22	97.10
IUUC-Tgu-116886	Taeniopygia guttata	57.14	6.00e-22	96.70
IUUC-Tni-120909	Tetraodon nigroviridis	57.14	2.00e-22	98.20
IUUC-Tca-121830	Theobroma cacao	58.01	4.00e-56	210.00
IUUC-Tae-123038	Triticum aestivum	70.94	5.00e-57	213.00
IUUC-Tbe-127360	Tupaia belangeri	57.14	3.00e-22	97.10
IUUC-Ttr-129044	Tursiops truncatus	57.14	4.00e-22	97.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence