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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-104832
UUCD1 version UUC-RaN-00718
Ensembl Protein ID ENSRNOP00000075183.1
UniProt Accession A0A0G2K9Y6; A0A0G2K9Y6_RAT
Genbank Protein ID EDL75269.1
Protein Name BRCA1 associated RING domain 1; BRCA1-associated RING domain protein 1
Genbank Nucleotide ID AABR07068030
Gene Name Bard1; rCG_25001
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000014960.6 ENSRNOT00000087870.1 ENSRNOP00000075183.1
ENSRNOG00000014960.6 ENSRNOT00000020414.4 ENSRNOP00000020414.4
Annotation
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNATRANSFACRAID2
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 38.36 6.00e-18 90.10 IUUC-Ath-006986
E3 activity/RING/RING 68.78 0.00e+00 954.00 IUUC-Hsa-045826
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MPHRPPRVRS GNKPPPVPAM EPATDGLWAH SRAALARLEK LLRCSRCANI LREPVCLGGC 60
EHIFCSGCIS DCVGSGCPVC HTPAWILDLK INRQLDSMIQ LYSKLQNLLH DNKGSDSKDD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104832|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TACAACTCCT GAGGGCGTGG CTTCTCAAGC TTTGCCCCTC CATTTCCGGA ACTTTGACCG 60
CGTTCTAAAG CCCCGCCCCC AAACCTTGAG GGCGTGGCTT CAAGCCGCGT CCCTCCATCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104832|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR033097--BARD1
IPR001357--BRCT_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50172--BRCT
PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF12796--Ank_2
PRINTS

PR01415--ANKYRIN
SMART

SM00248--ANK
SM00292--BRCT
Gene Ontology

GO:0070531--C:BRCA1-A complex
GO:0031436--C:BRCA1-BARD1 complex
GO:0016607--C:nuclear speck
GO:0000932--C:P-body
GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0043066--P:negative regulation of apoptotic process
GO:0046826--P:negative regulation of protein export from nucleus
GO:0043065--P:positive regulation of apoptotic process
GO:0085020--P:protein K6-linked ubiquitination
GO:0042325--P:regulation of phosphorylation
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000225 Aegilops tauschii 35.37 4.00e-20 94.00
IUUC-Aml-002346 Ailuropoda melanoleuca 67.68 0.00e+00 993.00
IUUC-Atr-002625 Amborella trichopoda 32.26 2.00e-20 95.10
IUUC-Apl-004108 Anas platyrhynchos 66.76 8.00e-144 504.00
IUUC-Aca-005387 Anolis carolinensis 46.26 0.00e+00 637.00
IUUC-Ath-006986 Arabidopsis thaliana 35.20 2.00e-21 97.80
IUUC-Ame-011716 Astyanax mexicanus 52.84 4.00e-58 219.00
IUUC-Bta-013417 Bos taurus 69.03 0.00e+00 991.00
IUUC-Bdi-014760 Brachypodium distachyon 36.31 1.00e-20 95.90
IUUC-Bol-016476 Brassica oleracea 36.49 1.00e-19 92.00
IUUC-Bra-017176 Brassica rapa 34.73 3.00e-21 97.40
IUUC-Cel-018312 Caenorhabditis elegans 26.29 3.00e-15 77.40
IUUC-Cja-019415 Callithrix jacchus 68.99 0.00e+00 1037.00
IUUC-Cfa-020351 Canis familiaris 67.62 0.00e+00 901.00
IUUC-Cpo-021746 Cavia porcellus 66.93 0.00e+00 966.00
IUUC-Csa-023450 Chlorocebus sabaeus 69.97 0.00e+00 988.00
IUUC-Csv-025987 Ciona savignyi 37.01 9.00e-53 201.00
IUUC-Dno-029038 Dasypus novemcinctus 59.89 0.00e+00 847.00
IUUC-Dor-030826 Dipodomys ordii 67.17 0.00e+00 879.00
IUUC-Ete-033061 Echinops telfairi 62.47 0.00e+00 864.00
IUUC-Eca-033710 Equus caballus 64.05 0.00e+00 667.00
IUUC-Eeu-035266 Erinaceus europaeus 53.86 4.00e-149 521.00
IUUC-Fca-035414 Felis catus 69.83 0.00e+00 1044.00
IUUC-Fal-037357 Ficedula albicollis 48.24 0.00e+00 667.00
IUUC-Gga-040255 Gallus gallus 65.94 2.00e-139 489.00
IUUC-Gma-044372 Glycine max 36.17 1.00e-18 89.70
IUUC-Ggo-045300 Gorilla gorilla 68.88 0.00e+00 1018.00
IUUC-Hsa-045826 Homo sapiens 69.14 0.00e+00 1001.00
IUUC-Itr-048456 Ictidomys tridecemlineatus 71.12 0.00e+00 1031.00
IUUC-Lch-050674 Latimeria chalumnae 59.79 2.00e-132 466.00
IUUC-Lpe-050895 Leersia perrieri 34.69 7.00e-19 89.70
IUUC-Laf-054591 Loxodonta africana 67.48 0.00e+00 965.00
IUUC-Mcc-055017 Macaca mulatta 65.58 0.00e+00 914.00
IUUC-Mtr-058400 Medicago truncatula 37.71 2.00e-23 104.00
IUUC-Mga-059484 Meleagris gallopavo 65.12 1.00e-138 487.00
IUUC-Mmr-061544 Microcebus murinus 70.05 0.00e+00 1071.00
IUUC-Mdo-062408 Monodelphis domestica 71.24 3.00e-158 552.00
IUUC-Mmu-064203 Mus musculus 89.06 0.00e+00 1320.00
IUUC-Mac-065131 Musa acuminata 28.05 2.00e-20 95.10
IUUC-Mpu-066899 Mustela putorius furo 70.73 0.00e+00 1009.00
IUUC-Mlu-067781 Myotis lucifugus 65.58 0.00e+00 886.00
IUUC-Nle-069031 Nomascus leucogenys 69.34 0.00e+00 1039.00
IUUC-Opr-070889 Ochotona princeps 60.74 5.00e-149 521.00
IUUC-Ont-072557 Oreochromis niloticus 49.60 8.00e-107 381.00
IUUC-Ocu-074785 Oryctolagus cuniculus 68.25 0.00e+00 987.00
IUUC-Oba-075953 Oryza barthii 37.93 8.00e-21 95.50
IUUC-Obr-076308 Oryza brachyantha 36.73 8.00e-21 96.30
IUUC-Ogl-076938 Oryza glaberrima 37.93 8.00e-21 95.50
IUUC-Ogu-078659 Oryza glumaepatula 37.50 2.00e-16 81.30
IUUC-Oin-079086 Oryza indica 37.50 2.00e-16 81.30
IUUC-Olo-080264 Oryza longistaminata 37.50 6.00e-16 80.50
IUUC-Ome-081445 Oryza meridionalis 36.67 2.00e-16 81.60
IUUC-Oni-082364 Oryza nivara 37.93 7.00e-21 95.50
IUUC-Opu-083700 Oryza punctata 36.05 6.00e-20 93.20
IUUC-Oru-085093 Oryza rufipogon 37.50 2.00e-16 81.60
IUUC-Osa-085434 Oryza sativa 37.93 5.00e-21 95.90
IUUC-Olu-087823 Ostreococcus lucimarinus 35.48 2.00e-16 77.80
IUUC-Oga-088383 Otolemur garnettii 65.30 0.00e+00 885.00
IUUC-Oar-089357 Ovis aries 68.86 0.00e+00 1048.00
IUUC-Ptr-090959 Pan troglodytes 69.14 0.00e+00 998.00
IUUC-Pan-092160 Papio anubis 70.00 0.00e+00 1018.00
IUUC-Pab-098198 Pongo abelii 68.23 0.00e+00 1000.00
IUUC-Pop-099956 Populus trichocarpa 33.78 5.00e-20 93.60
IUUC-Ppe-101676 Prunus persica 40.46 5.00e-20 93.60
IUUC-Pva-102243 Pteropus vampyrus 70.01 0.00e+00 1036.00
IUUC-Sha-107601 Sarcophilus harrisii 66.49 2.00e-149 523.00
IUUC-Sly-111863 Solanum lycopersicum 30.26 3.00e-22 100.00
IUUC-Stu-112154 Solanum tuberosum 36.36 3.00e-21 97.40
IUUC-Sar-113493 Sorex araneus 61.90 6.00e-58 218.00
IUUC-Sbi-114470 Sorghum bicolor 33.70 3.00e-20 94.00
IUUC-Ssc-115611 Sus scrofa 68.71 0.00e+00 1002.00
IUUC-Tgu-116812 Taeniopygia guttata 48.32 0.00e+00 701.00
IUUC-Tru-117996 Takifugu rubripes 48.15 4.00e-91 329.00
IUUC-Tsy-119446 Tarsius syrichta 55.51 0.00e+00 774.00
IUUC-Tni-120842 Tetraodon nigroviridis 45.91 1.00e-103 370.00
IUUC-Tca-121417 Theobroma cacao 36.49 4.00e-22 100.00
IUUC-Tae-124838 Triticum aestivum 35.37 6.00e-20 93.20
IUUC-Tur-126725 Triticum urartu 35.37 6.00e-20 93.20
IUUC-Tbe-127550 Tupaia belangeri 61.49 0.00e+00 844.00
IUUC-Ttr-128364 Tursiops truncatus 68.65 0.00e+00 928.00
IUUC-Vpa-130659 Vicugna pacos 65.89 0.00e+00 814.00
IUUC-Xtr-131846 Xenopus tropicalis 44.18 2.00e-176 612.00
Created Date 25-Jun-2017

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