iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013056

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBE4B protein

Genbank Nucleotide ID

DAAA02042992

Gene Name

UBE4B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000010401.5	ENSBTAT00000013729.5	ENSBTAP00000013729.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.10e-22	77.4	1288	1359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            p+ef++p++ +lM+dPv lpsG  +drs I ++l ++ + +P++rq+lte++l P  +l++ i+aw+ e+++
   Q: 1288 APDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPT-DPFNRQTLTESMLEPVPELKEQIHAWMREKQN 1359
           79**********************************9998.***************************99986 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MEELSADEIR RRRLARLAGG QTSQPTTPLT SPQRENPPGP PIAASAPGPS QSLGLNVHNM 60
TPATSPIGAS GVAHRSQSSE GVSSLSSSPS NSLETQSQSL SRSQSMDIDG VSCEKSMSQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCAAGGCA TTTCAGTGCC TCTCGTGTTC TTATTTTTTA ACCTCTGACT ATGCAATTCT 60
GAAACCTCCC CCATTCGGGG GACCAGACAG CCCGATAGAC ACCTACCACT CTCCTCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0005524--F:ATP binding
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0008626--P:granzyme-mediated apoptotic signaling pathway
GO:0031175--P:neuron projection development
GO:0051865--P:protein autoubiquitination
GO:0006513--P:protein monoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0009411--P:response to UV
GO:0030433--P:ubiquitin-dependent ERAD pathway
GO:0003222--P:ventricular trabecula myocardium morphogenesis

KEGG

bta:520833

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000585	Aegilops tauschii	33.07	2.00e-94	340.00
IUUC-Aml-002396	Ailuropoda melanoleuca	99.27	0.00e+00	1769.00
IUUC-Atr-002479	Amborella trichopoda	32.02	3.00e-99	356.00
IUUC-Apl-003747	Anas platyrhynchos	86.38	0.00e+00	2069.00
IUUC-Aca-004866	Anolis carolinensis	93.71	0.00e+00	1660.00
IUUC-Aly-006300	Arabidopsis lyrata	30.65	7.00e-89	322.00
IUUC-Ath-006962	Arabidopsis thaliana	30.50	4.00e-86	313.00
IUUC-Ago-007880	Ashbya gossypii	30.00	4.00e-76	279.00
IUUC-Acl-008289	Aspergillus clavatus	30.49	2.00e-98	353.00
IUUC-Afl-008711	Aspergillus flavus	30.46	3.00e-103	369.00
IUUC-Afu-008766	Aspergillus fumigatus	30.87	1.00e-102	368.00
IUUC-Ani-009126	Aspergillus nidulans	30.67	4.00e-100	359.00
IUUC-Ang-009837	Aspergillus niger	30.30	4.00e-98	353.00
IUUC-Aor-009919	Aspergillus oryzae	30.06	8.00e-99	355.00
IUUC-Ate-010300	Aspergillus terreus	31.29	2.00e-105	377.00
IUUC-Ame-011355	Astyanax mexicanus	84.99	0.00e+00	1576.00
IUUC-Bgr-011995	Blumeria graminis	30.14	6.00e-100	358.00
IUUC-Bci-013605	Botrytis cinerea	28.60	1.00e-87	318.00
IUUC-Bdi-015032	Brachypodium distachyon	30.10	2.00e-89	323.00
IUUC-Bol-016124	Brassica oleracea	30.85	2.00e-94	340.00
IUUC-Bra-017426	Brassica rapa	30.37	9.00e-95	342.00
IUUC-Cel-018606	Caenorhabditis elegans	31.21	6.00e-99	355.00
IUUC-Cja-018872	Callithrix jacchus	99.00	0.00e+00	1757.00
IUUC-Cfa-020045	Canis familiaris	95.20	0.00e+00	2162.00
IUUC-Cpo-022309	Cavia porcellus	98.21	0.00e+00	1726.00
IUUC-Cre-022726	Chlamydomonas reinhardtii	29.20	2.00e-49	189.00
IUUC-Csa-024003	Chlorocebus sabaeus	95.90	0.00e+00	1122.00
IUUC-Cho-025092	Choloepus hoffmanni	98.03	0.00e+00	701.00
IUUC-Cin-025533	Ciona intestinalis	47.62	0.00e+00	832.00
IUUC-Csv-026081	Ciona savignyi	63.98	2.00e-60	224.00
IUUC-Cgl-026710	Colletotrichum gloeosporioides	31.09	2.00e-104	374.00
IUUC-Cne-027098	Cryptococcus neoformans	30.50	2.00e-104	374.00
IUUC-Cme-027352	Cyanidioschyzon merolae	32.51	2.00e-86	314.00
IUUC-Dre-027979	Danio rerio	84.05	0.00e+00	1509.00
IUUC-Dno-029282	Dasypus novemcinctus	94.81	0.00e+00	2152.00
IUUC-Dor-030904	Dipodomys ordii	80.44	0.00e+00	772.00
IUUC-Dse-031393	Dothistroma septosporum	31.56	5.00e-96	346.00
IUUC-Dme-031666	Drosophila melanogaster	42.05	0.00e+00	688.00
IUUC-Ete-032519	Echinops telfairi	98.77	2.00e-180	626.00
IUUC-Eca-033778	Equus caballus	94.65	0.00e+00	2143.00
IUUC-Eeu-035315	Erinaceus europaeus	90.36	0.00e+00	900.00
IUUC-Fca-035658	Felis catus	92.31	0.00e+00	2115.00
IUUC-Fal-037638	Ficedula albicollis	93.47	0.00e+00	1666.00
IUUC-Fox-037909	Fusarium oxysporum	29.99	2.00e-93	337.00
IUUC-Fso-038406	Fusarium solani	29.70	8.00e-95	342.00
IUUC-Gmo-039379	Gadus morhua	84.33	0.00e+00	1511.00
IUUC-Ggr-039851	Gaeumannomyces graminis	31.76	4.00e-104	372.00
IUUC-Gga-041136	Gallus gallus	85.54	0.00e+00	2036.00
IUUC-Gac-041910	Gasterosteus aculeatus	84.40	0.00e+00	1519.00
IUUC-Gma-043995	Glycine max	31.12	2.00e-91	330.00
IUUC-Ggo-045354	Gorilla gorilla	92.76	0.00e+00	1595.00
IUUC-Hsa-046880	Homo sapiens	99.00	0.00e+00	1783.00
IUUC-Hvu-047157	Hordeum vulgare	33.38	4.00e-90	325.00
IUUC-Itr-048213	Ictidomys tridecemlineatus	98.50	0.00e+00	642.00
IUUC-Kpa-049211	Komagataella pastoris	27.80	3.00e-74	273.00
IUUC-Lch-050534	Latimeria chalumnae	79.41	0.00e+00	1922.00
IUUC-Lpe-051022	Leersia perrieri	30.90	6.00e-91	329.00
IUUC-Loc-052622	Lepisosteus oculatus	83.14	0.00e+00	1556.00
IUUC-Lma-053241	Leptosphaeria maculans	30.16	8.00e-96	345.00
IUUC-Laf-053646	Loxodonta africana	99.22	0.00e+00	1760.00
IUUC-Mcc-055588	Macaca mulatta	97.69	0.00e+00	1762.00
IUUC-Meu-055999	Macropus eugenii	79.42	0.00e+00	1319.00
IUUC-Mor-057064	Magnaporthe oryzae	31.02	2.00e-104	374.00
IUUC-Mpo-057452	Magnaporthe poae	31.76	1.00e-105	378.00
IUUC-Mtr-058016	Medicago truncatula	29.75	1.00e-97	351.00
IUUC-Mla-058887	Melampsora laricipopulina	32.81	3.00e-107	383.00
IUUC-Mga-059497	Meleagris gallopavo	85.68	0.00e+00	2066.00
IUUC-Mvi-060343	Microbotryum violaceum	33.99	2.00e-110	393.00
IUUC-Mmr-061173	Microcebus murinus	89.92	0.00e+00	1508.00
IUUC-Mdo-062102	Monodelphis domestica	95.61	0.00e+00	1682.00
IUUC-Mmu-063223	Mus musculus	97.88	0.00e+00	1722.00
IUUC-Mac-065531	Musa acuminata	30.90	4.00e-95	343.00
IUUC-Mpu-066624	Mustela putorius furo	67.53	0.00e+00	1070.00
IUUC-Mlu-068018	Myotis lucifugus	93.70	0.00e+00	2173.00
IUUC-Nfi-068590	Neosartorya fischeri	31.30	1.00e-103	371.00
IUUC-Ncr-068901	Neurospora crassa	31.16	3.00e-101	363.00
IUUC-Nle-069605	Nomascus leucogenys	97.90	0.00e+00	1727.00
IUUC-Opr-071011	Ochotona princeps	84.67	0.00e+00	852.00
IUUC-Ont-072304	Oreochromis niloticus	84.45	0.00e+00	1507.00
IUUC-Oan-073410	Ornithorhynchus anatinus	97.20	0.00e+00	1090.00
IUUC-Ocu-074910	Oryctolagus cuniculus	98.20	0.00e+00	1714.00
IUUC-Oba-075073	Oryza barthii	30.75	1.00e-96	347.00
IUUC-Obr-076452	Oryza brachyantha	31.03	1.00e-95	344.00
IUUC-Ogl-077141	Oryza glaberrima	30.75	8.00e-97	348.00
IUUC-Ogu-078116	Oryza glumaepatula	30.75	4.00e-97	349.00
IUUC-Oin-079066	Oryza indica	30.87	3.00e-97	349.00
IUUC-Olo-080253	Oryza longistaminata	28.86	8.00e-83	301.00
IUUC-Ome-081263	Oryza meridionalis	30.63	3.00e-96	347.00
IUUC-Oni-082019	Oryza nivara	30.87	3.00e-97	350.00
IUUC-Opu-083558	Oryza punctata	30.79	1.00e-97	351.00
IUUC-Oru-085002	Oryza rufipogon	30.75	1.00e-96	348.00
IUUC-Osa-085980	Oryza sativa	30.87	4.00e-97	349.00
IUUC-Ola-086323	Oryzias latipes	81.28	0.00e+00	1447.00
IUUC-Olu-087901	Ostreococcus lucimarinus	31.06	8.00e-97	348.00
IUUC-Oga-087969	Otolemur garnettii	90.08	0.00e+00	2054.00
IUUC-Oar-090020	Ovis aries	95.80	0.00e+00	2126.00
IUUC-Ptr-091589	Pan troglodytes	99.00	0.00e+00	1783.00
IUUC-Pan-091718	Papio anubis	99.32	0.00e+00	865.00
IUUC-Psi-093013	Pelodiscus sinensis	86.21	0.00e+00	2095.00
IUUC-Pma-094627	Petromyzon marinus	74.36	0.00e+00	628.00
IUUC-Pno-094840	Phaeosphaeria nodorum	30.04	4.00e-102	366.00
IUUC-Ppa-095989	Physcomitrella patens	29.58	3.00e-97	350.00
IUUC-Pfo-096436	Poecilia formosa	85.49	0.00e+00	1563.00
IUUC-Pab-098275	Pongo abelii	95.45	0.00e+00	1086.00
IUUC-Pop-098797	Populus trichocarpa	30.60	6.00e-99	355.00
IUUC-Pca-100478	Procavia capensis	72.31	0.00e+00	876.00
IUUC-Ppe-101230	Prunus persica	30.92	3.00e-100	360.00
IUUC-Pva-102459	Pteropus vampyrus	94.18	0.00e+00	1628.00
IUUC-Pgr-103485	Puccinia graminis	32.69	2.00e-108	387.00
IUUC-Ptt-104001	Puccinia triticina	42.17	1.00e-45	178.00
IUUC-Pte-104084	Pyrenophora teres	32.25	1.00e-109	391.00
IUUC-Pyt-104484	Pyrenophora triticirepentis	32.00	1.00e-108	387.00
IUUC-Rno-105719	Rattus norvegicus	97.99	0.00e+00	1726.00
IUUC-Sce-106135	Saccharomyces cerevisiae	36.74	4.00e-72	266.00
IUUC-Sha-106760	Sarcophilus harrisii	95.27	0.00e+00	1673.00
IUUC-Sja-107698	Schizosaccharomyces japonicus	32.70	2.00e-112	400.00
IUUC-Spo-108076	Schizosaccharomyces pombe	33.09	1.00e-106	381.00
IUUC-Ssl-108624	Sclerotinia sclerotiorum	29.30	6.00e-99	355.00
IUUC-Smo-108769	Selaginella moellendorffii	29.20	2.00e-88	320.00
IUUC-Sit-109949	Setaria italica	31.17	2.00e-92	334.00
IUUC-Sly-110973	Solanum lycopersicum	31.09	4.00e-84	306.00
IUUC-Stu-112372	Solanum tuberosum	30.05	1.00e-99	358.00
IUUC-Sar-113469	Sorex araneus	90.48	0.00e+00	1018.00
IUUC-Sbi-113828	Sorghum bicolor	30.89	7.00e-96	345.00
IUUC-Sre-114967	Sporisorium reilianum	32.51	7.00e-101	362.00
IUUC-Ssc-115655	Sus scrofa	91.70	0.00e+00	1440.00
IUUC-Tgu-117290	Taeniopygia guttata	93.83	0.00e+00	1629.00
IUUC-Tru-118193	Takifugu rubripes	84.62	0.00e+00	1532.00
IUUC-Tsy-118926	Tarsius syrichta	98.45	0.00e+00	1744.00
IUUC-Tni-120862	Tetraodon nigroviridis	85.23	0.00e+00	1500.00
IUUC-Tca-121096	Theobroma cacao	31.40	3.00e-99	357.00
IUUC-Tre-122104	Trichoderma reesei	30.69	5.00e-98	353.00
IUUC-Tvi-122345	Trichoderma virens	30.76	2.00e-102	368.00
IUUC-Tae-124607	Triticum aestivum	32.70	5.00e-95	342.00
IUUC-Tur-126056	Triticum urartu	32.70	1.00e-94	340.00
IUUC-Tme-127074	Tuber melanosporum	32.81	7.00e-98	352.00
IUUC-Tbe-127533	Tupaia belangeri	94.35	0.00e+00	1645.00
IUUC-Ttr-128757	Tursiops truncatus	97.21	0.00e+00	1705.00
IUUC-Uma-129550	Ustilago maydis	32.69	1.00e-102	368.00
IUUC-Vda-129901	Verticillium dahliae	30.32	7.00e-101	362.00
IUUC-Vpa-130636	Vicugna pacos	97.84	0.00e+00	1040.00
IUUC-Vvi-130891	Vitis vinifera	31.16	3.00e-98	353.00
IUUC-Xtr-132364	Xenopus tropicalis	78.37	0.00e+00	1846.00
IUUC-Xma-133772	Xiphophorus maculatus	85.38	0.00e+00	1561.00
IUUC-Yli-134506	Yarrowia lipolytica	30.97	2.00e-80	294.00
IUUC-Zma-135695	Zea mays	30.94	2.00e-88	320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence