iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114182

Ensembl Protein ID

Sb02g000766.1

UniProt Accession

C5X775; C5X775_SORBI

Genbank Protein ID

EER95742.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G006400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g000766	Sb02g000766.1	Sb02g000766.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-08	33.9	124	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f.....sd.tllvsGsdDgtikvWDlrtgvll 36
           +     ++ tll sG+ D+ +++W+++tg ll
   Q: 124  LpivvdPSeTLLMSGGEDCAVRIWSIKTGELL 155
           3446665559*****************99875 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAHMQLSGNV VLCGLRNGSI APVDVRQKQH NQPTGVASSS NARKTVPRLP TRHPGKKRNQ 60
AGMDKISSVI SMSSAVCSLV TLSSDENYFL GSSMDGSIKL FDLRLIQKGG IQSYEGHVNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATTGACTC GGCAATGGGA TTATGGACTG CCTATAGAGT TCATTCACTT GATCGTACAA 60
TGTGGACAGC TGATTGTAGT TCTGATGGCA CACATGCAGC TTTCGGTGAG TTCATTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_02g000766

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	77.89	9.00e-88	315.00
IUUC-Aml-001929	Ailuropoda melanoleuca	39.80	1.00e-12	67.00
IUUC-Atr-002556	Amborella trichopoda	43.26	1.00e-45	176.00
IUUC-Apl-003177	Anas platyrhynchos	32.12	7.00e-14	71.20
IUUC-Aca-004610	Anolis carolinensis	30.99	2.00e-12	66.20
IUUC-Aly-005883	Arabidopsis lyrata	40.89	3.00e-34	138.00
IUUC-Ath-006668	Arabidopsis thaliana	34.71	2.00e-33	136.00
IUUC-Ame-010690	Astyanax mexicanus	32.00	3.00e-15	75.90
IUUC-Bta-012668	Bos taurus	45.12	4.00e-14	72.00
IUUC-Bdi-014848	Brachypodium distachyon	73.37	3.00e-75	275.00
IUUC-Bol-016035	Brassica oleracea	41.29	6.00e-36	144.00
IUUC-Bra-016687	Brassica rapa	40.39	1.00e-35	143.00
IUUC-Cja-019560	Callithrix jacchus	43.90	3.00e-13	66.60
IUUC-Cfa-020441	Canis familiaris	39.80	2.00e-12	66.60
IUUC-Cpo-021299	Cavia porcellus	37.04	3.00e-13	68.90
IUUC-Csa-023185	Chlorocebus sabaeus	46.34	3.00e-14	72.40
IUUC-Cho-024353	Choloepus hoffmanni	31.82	8.00e-15	74.30
IUUC-Dno-029890	Dasypus novemcinctus	40.82	7.00e-14	71.20
IUUC-Eca-033466	Equus caballus	41.84	2.00e-14	73.20
IUUC-Eeu-034995	Erinaceus europaeus	32.61	7.00e-13	67.40
IUUC-Fca-036199	Felis catus	39.80	2.00e-12	66.60
IUUC-Fal-036717	Ficedula albicollis	32.85	2.00e-13	69.30
IUUC-Gmo-039201	Gadus morhua	44.94	3.00e-16	79.30
IUUC-Gga-040398	Gallus gallus	33.58	2.00e-14	73.20
IUUC-Gac-042391	Gasterosteus aculeatus	41.00	2.00e-17	83.20
IUUC-Gma-042906	Glycine max	45.15	6.00e-43	167.00
IUUC-Ggo-045348	Gorilla gorilla	45.12	3.00e-14	72.40
IUUC-Hsa-046746	Homo sapiens	45.12	4.00e-14	72.00
IUUC-Hvu-047825	Hordeum vulgare	75.50	1.00e-80	292.00
IUUC-Itr-048472	Ictidomys tridecemlineatus	41.46	5.00e-12	64.70
IUUC-Lch-050272	Latimeria chalumnae	31.33	3.00e-15	75.90
IUUC-Lpe-051618	Leersia perrieri	74.87	7.00e-78	283.00
IUUC-Loc-051772	Lepisosteus oculatus	34.81	2.00e-16	80.10
IUUC-Laf-054577	Loxodonta africana	39.53	3.00e-12	65.50
IUUC-Mcc-055284	Macaca mulatta	46.34	3.00e-14	72.40
IUUC-Mtr-058472	Medicago truncatula	45.15	8.00e-44	170.00
IUUC-Mga-059238	Meleagris gallopavo	33.58	2.00e-14	73.20
IUUC-Mmr-061642	Microcebus murinus	42.68	1.00e-12	66.20
IUUC-Mdo-062030	Monodelphis domestica	38.00	6.00e-13	68.20
IUUC-Mmu-063420	Mus musculus	37.04	1.00e-12	67.40
IUUC-Mac-065231	Musa acuminata	51.89	7.00e-56	210.00
IUUC-Mpu-065692	Mustela putorius furo	39.80	2.00e-12	66.60
IUUC-Mlu-067428	Myotis lucifugus	39.80	3.00e-12	65.50
IUUC-Nle-070145	Nomascus leucogenys	46.34	2.00e-14	72.80
IUUC-Opr-071081	Ochotona princeps	43.90	2.00e-12	66.60
IUUC-Ont-071302	Oreochromis niloticus	41.00	2.00e-16	79.70
IUUC-Ocu-073925	Oryctolagus cuniculus	41.46	1.00e-10	60.50
IUUC-Oba-075797	Oryza barthii	76.38	6.00e-78	284.00
IUUC-Obr-076014	Oryza brachyantha	76.38	2.00e-79	289.00
IUUC-Ogl-077201	Oryza glaberrima	76.38	7.00e-78	283.00
IUUC-Ogu-078056	Oryza glumaepatula	76.26	2.00e-77	282.00
IUUC-Oin-080062	Oryza indica	76.38	4.00e-78	284.00
IUUC-Olo-080869	Oryza longistaminata	76.88	1.00e-79	290.00
IUUC-Ome-081820	Oryza meridionalis	75.88	6.00e-78	283.00
IUUC-Oni-082497	Oryza nivara	76.38	1.00e-77	283.00
IUUC-Opu-083780	Oryza punctata	71.43	5.00e-78	285.00
IUUC-Oru-085091	Oryza rufipogon	76.38	5.00e-78	284.00
IUUC-Osa-085725	Oryza sativa	76.38	5.00e-78	284.00
IUUC-Ola-087033	Oryzias latipes	32.68	8.00e-17	80.90
IUUC-Oga-088861	Otolemur garnettii	43.90	9.00e-14	70.90
IUUC-Oar-090048	Ovis aries	45.12	1.00e-13	70.10
IUUC-Ptr-091658	Pan troglodytes	41.58	1.00e-14	73.90
IUUC-Pan-092873	Papio anubis	43.90	5.00e-12	65.10
IUUC-Psi-093421	Pelodiscus sinensis	32.12	1.00e-12	67.00
IUUC-Pma-094216	Petromyzon marinus	40.96	4.00e-12	65.10
IUUC-Ppa-095186	Physcomitrella patens	37.00	6.00e-27	114.00
IUUC-Pfo-096178	Poecilia formosa	31.37	3.00e-15	75.90
IUUC-Pab-098465	Pongo abelii	43.90	4.00e-14	71.60
IUUC-Pop-099334	Populus trichocarpa	47.64	5.00e-49	186.00
IUUC-Pca-100845	Procavia capensis	41.46	4.00e-12	65.50
IUUC-Pva-103203	Pteropus vampyrus	40.82	3.00e-13	68.90
IUUC-Rno-105675	Rattus norvegicus	37.96	2.00e-13	69.70
IUUC-Sha-107389	Sarcophilus harrisii	42.68	1.00e-11	63.50
IUUC-Sit-110421	Setaria italica	84.42	1.00e-96	345.00
IUUC-Sly-110888	Solanum lycopersicum	42.44	1.00e-33	136.00
IUUC-Ssc-116005	Sus scrofa	42.68	7.00e-13	67.80
IUUC-Tgu-117023	Taeniopygia guttata	30.66	8.00e-11	60.80
IUUC-Tru-118221	Takifugu rubripes	41.00	2.00e-16	79.70
IUUC-Tsy-118784	Tarsius syrichta	40.79	5.00e-12	64.70
IUUC-Tni-120072	Tetraodon nigroviridis	40.00	2.00e-16	80.10
IUUC-Tca-121267	Theobroma cacao	46.86	3.00e-42	165.00
IUUC-Tae-124900	Triticum aestivum	77.00	1.00e-82	298.00
IUUC-Tur-126655	Triticum urartu	76.77	3.00e-81	294.00
IUUC-Tbe-127243	Tupaia belangeri	42.17	6.00e-11	61.60
IUUC-Ttr-129237	Tursiops truncatus	40.82	1.00e-13	70.10
IUUC-Vvi-131184	Vitis vinifera	41.94	5.00e-43	167.00
IUUC-Xtr-132006	Xenopus tropicalis	36.11	4.00e-14	71.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence