iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088798

Ensembl Protein ID

ENSOGAP00000021293.1

UniProt Accession

H0XYV0; H0XYV0_OTOGA

Genbank Protein ID

ENSOGAP00000021293

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03162901

Gene Name

SEH1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000024817.1	ENSOGAT00000025716.1	ENSOGAP00000021293.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-21	75.2	11	40

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H+d +++++f  ++++++++s D ++kvWD
   Q: 11   HKDLIHDVSFdfHGRRMATCSSDQSVKVWD 40
           9*********976599************** PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MFVARSIAAD HKDLIHDVSF DFHGRRMATC SSDQSVKVWD KSESGDWHCT ASWKTHSGSV 60
WRVTWAHPEF GQVLASCSFD RTAAVWEEIV GESNDKLRGQ SHWVKRTTLV DSRTSVTDVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCGTGCC GCCACCGCCC TCTTAGGAGG CGCGGGCCGG CGGAAGCCAT GTTTGTAGCG 60
CGCAGCATCG CGGCAGACCA TAAAGATCTC ATCCATGATG TCTCTTTCGA CTTCCACGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0051315--P:attachment of mitotic spindle microtubules to kinetochore
GO:0034629--P:cellular protein complex localization
GO:0034198--P:cellular response to amino acid starvation
GO:0002534--P:cytokine production involved in inflammatory response
GO:0050830--P:defense response to Gram-positive bacterium
GO:0006999--P:nuclear pore organization
GO:1904263--P:positive regulation of TORC1 signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	99.06	0.00e+00	631.00
IUUC-Apl-003654	Anas platyrhynchos	93.44	4.00e-170	590.00
IUUC-Aca-004378	Anolis carolinensis	90.03	2.00e-166	578.00
IUUC-Ago-007816	Ashbya gossypii	32.94	4.00e-50	191.00
IUUC-Ame-011945	Astyanax mexicanus	84.92	5.00e-171	593.00
IUUC-Bta-013306	Bos taurus	97.76	0.00e+00	654.00
IUUC-Cel-018235	Caenorhabditis elegans	42.31	5.00e-75	274.00
IUUC-Cja-018849	Callithrix jacchus	98.32	0.00e+00	650.00
IUUC-Cfa-020841	Canis familiaris	90.52	1.00e-180	628.00
IUUC-Cpo-021379	Cavia porcellus	96.64	0.00e+00	648.00
IUUC-Csa-023900	Chlorocebus sabaeus	99.16	0.00e+00	655.00
IUUC-Cho-024660	Choloepus hoffmanni	97.81	1.00e-179	622.00
IUUC-Cin-025471	Ciona intestinalis	56.48	7.00e-104	370.00
IUUC-Csv-026242	Ciona savignyi	59.76	3.00e-89	321.00
IUUC-Dre-028068	Danio rerio	88.18	2.00e-179	621.00
IUUC-Dno-029981	Dasypus novemcinctus	91.02	8.00e-173	599.00
IUUC-Dme-031763	Drosophila melanogaster	58.15	2.00e-112	398.00
IUUC-Ete-032243	Echinops telfairi	62.64	2.00e-118	418.00
IUUC-Eca-033425	Equus caballus	98.44	8.00e-167	579.00
IUUC-Eeu-035119	Erinaceus europaeus	78.22	4.00e-118	417.00
IUUC-Fca-036520	Felis catus	98.84	0.00e+00	680.00
IUUC-Fal-037234	Ficedula albicollis	93.75	3.00e-174	606.00
IUUC-Gmo-039013	Gadus morhua	86.03	1.00e-176	612.00
IUUC-Gga-041059	Gallus gallus	94.12	0.00e+00	668.00
IUUC-Gac-041337	Gasterosteus aculeatus	85.47	8.00e-172	596.00
IUUC-Ggo-044944	Gorilla gorilla	98.60	0.00e+00	702.00
IUUC-Hsa-046038	Homo sapiens	98.32	0.00e+00	700.00
IUUC-Hvu-047455	Hordeum vulgare	30.70	2.00e-35	142.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	98.44	2.00e-166	578.00
IUUC-Kpa-049201	Komagataella pastoris	36.56	1.00e-50	192.00
IUUC-Lch-050466	Latimeria chalumnae	79.51	4.00e-178	617.00
IUUC-Loc-052773	Lepisosteus oculatus	75.72	7.00e-169	586.00
IUUC-Laf-053409	Loxodonta africana	97.76	0.00e+00	650.00
IUUC-Meu-055958	Macropus eugenii	70.40	1.00e-123	436.00
IUUC-Mga-059348	Meleagris gallopavo	94.03	2.00e-171	594.00
IUUC-Mmr-060977	Microcebus murinus	99.18	3.00e-135	473.00
IUUC-Mdo-061806	Monodelphis domestica	95.53	0.00e+00	681.00
IUUC-Mmu-064328	Mus musculus	97.85	0.00e+00	671.00
IUUC-Mpu-066873	Mustela putorius furo	99.38	0.00e+00	632.00
IUUC-Mlu-067563	Myotis lucifugus	92.16	0.00e+00	648.00
IUUC-Nle-068977	Nomascus leucogenys	98.49	0.00e+00	648.00
IUUC-Opr-070773	Ochotona princeps	64.97	6.00e-88	317.00
IUUC-Ont-072644	Oreochromis niloticus	86.31	5.00e-177	613.00
IUUC-Oan-073098	Ornithorhynchus anatinus	95.34	1.00e-165	575.00
IUUC-Ocu-073911	Oryctolagus cuniculus	99.16	0.00e+00	705.00
IUUC-Ola-087096	Oryzias latipes	85.15	1.00e-171	595.00
IUUC-Oar-090298	Ovis aries	96.89	9.00e-168	585.00
IUUC-Ptr-091074	Pan troglodytes	98.32	0.00e+00	702.00
IUUC-Pan-092013	Papio anubis	100.00	6.00e-143	499.00
IUUC-Psi-093508	Pelodiscus sinensis	92.81	5.00e-171	593.00
IUUC-Pma-094288	Petromyzon marinus	83.81	1.00e-103	368.00
IUUC-Ppa-095228	Physcomitrella patens	32.39	2.00e-37	149.00
IUUC-Pfo-096384	Poecilia formosa	85.47	2.00e-175	608.00
IUUC-Pab-098629	Pongo abelii	98.60	0.00e+00	703.00
IUUC-Pca-100322	Procavia capensis	73.44	2.00e-112	399.00
IUUC-Pva-102861	Pteropus vampyrus	98.88	0.00e+00	653.00
IUUC-Rno-104895	Rattus norvegicus	94.26	0.00e+00	660.00
IUUC-Sce-106420	Saccharomyces cerevisiae	34.76	3.00e-54	205.00
IUUC-Sha-106829	Sarcophilus harrisii	90.00	0.00e+00	632.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	40.00	1.00e-66	246.00
IUUC-Spo-108184	Schizosaccharomyces pombe	38.44	2.00e-64	238.00
IUUC-Smo-109282	Selaginella moellendorffii	32.91	8.00e-38	150.00
IUUC-Sar-113279	Sorex araneus	98.12	2.00e-166	578.00
IUUC-Sbi-114110	Sorghum bicolor	30.43	2.00e-36	145.00
IUUC-Ssc-115589	Sus scrofa	96.57	2.00e-177	614.00
IUUC-Tgu-117523	Taeniopygia guttata	93.84	0.00e+00	667.00
IUUC-Tru-117985	Takifugu rubripes	82.44	3.00e-157	550.00
IUUC-Tsy-118913	Tarsius syrichta	98.35	5.00e-168	583.00
IUUC-Tni-120670	Tetraodon nigroviridis	86.55	5.00e-176	610.00
IUUC-Tae-122796	Triticum aestivum	30.38	5.00e-35	141.00
IUUC-Tme-126885	Tuber melanosporum	36.69	5.00e-56	211.00
IUUC-Tbe-127344	Tupaia belangeri	78.71	2.00e-137	482.00
IUUC-Ttr-128347	Tursiops truncatus	98.75	3.00e-167	580.00
IUUC-Vpa-130656	Vicugna pacos	98.59	3.00e-159	554.00
IUUC-Xtr-132736	Xenopus tropicalis	91.06	0.00e+00	645.00
IUUC-Xma-133678	Xiphophorus maculatus	85.75	3.00e-176	610.00
IUUC-Yli-134659	Yarrowia lipolytica	40.62	5.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence