iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oan-073166

UUCD1 version

UUC-OrA-00705

Ensembl Protein ID

ENSOANP00000019303.1

UniProt Accession

F7FVS0; F7FVS0_ORNAN

Protein Name

Uncharacterized protein

Gene Name

PRPF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000012190.2	ENSOANT00000019306.2	ENSOANP00000019303.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-39	132.0	274	312
UBD/Beta-Prp	4.30e-91	305.4	99	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++++f ++  ++++Gs+D+t+kvWDlr+ +++ 
   Q: 274  GHLKEIYGINFsPNgYHIATGSGDNTCKVWDLRQRRCVY 312
           7999********77799*****************99985 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvht 89
           ++ +i+  +fsp++++lat++++g  k+w++ + +l+++l gh+  v av f+p++          l++++ D+ +k+w+l++ ++v  
   Q: 99   DDRPISYCHFSPNSKMLATACWSGLCKLWSIPDCNLIHTLRGHNTNVGAVVFHPKATvsldkkdvNLASCAADGSVKLWSLDSDEPVAD 187
           68899999**********************************************998999999999*********************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++gh+ +v  + ++psg +l ++  d   r+wdle ++++   ++gh+  v  +++h+dg+l  +G+lD + r+Wdl+tg+++  l+g 
   Q: 188  IEGHTVRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEIL-HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG- 274
           *****************************************.********************************************99. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW 249
           h + +y ++f++ng ++++gs d+t k+wdl++ +cv+t  +h++ v+ v+f     ++l++g+ D++ ++W
   Q: 275  HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFErYPCNFLLTGAYDNTAKVW 346
           *****************************************************8899*************** PP

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

RLRNILSVVG TDALKKTKKD DERSKKSREE YQQTWYHEGP NSLKTARLWI ANYSLPRAMK 60
RLEEARLHKE IPETSRTSQK QELHKALRSL NNFCSQIGDD RPISYCHFSP NSKMLATACW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGAAGGAC CCTTGCTGAG TTGGGTCCTG CTTTTGGGAG TTGGGAAGCA GTGATCCTGG 60
CAAGGCTGGA TGTCTGGGCA AGCCTGGCAG GCCCAGGATT GGATGGCTCA GGGGCAACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0015030--C:Cajal body
GO:0016607--C:nuclear speck
GO:0071001--C:U4/U6 snRNP
GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	43.95	7.00e-88	317.00
IUUC-Aml-001737	Ailuropoda melanoleuca	94.37	0.00e+00	751.00
IUUC-Atr-002828	Amborella trichopoda	43.94	1.00e-89	323.00
IUUC-Apl-003723	Anas platyrhynchos	91.05	0.00e+00	738.00
IUUC-Aca-004972	Anolis carolinensis	91.82	0.00e+00	724.00
IUUC-Aly-006531	Arabidopsis lyrata	43.37	5.00e-86	311.00
IUUC-Ath-007367	Arabidopsis thaliana	44.65	7.00e-95	340.00
IUUC-Ago-007893	Ashbya gossypii	34.35	5.00e-51	194.00
IUUC-Acl-008236	Aspergillus clavatus	38.36	8.00e-78	283.00
IUUC-Afl-008522	Aspergillus flavus	39.03	2.00e-85	309.00
IUUC-Afu-008904	Aspergillus fumigatus	38.69	1.00e-80	293.00
IUUC-Ani-009198	Aspergillus nidulans	38.76	7.00e-85	307.00
IUUC-Ang-009662	Aspergillus niger	42.86	2.00e-88	318.00
IUUC-Aor-009881	Aspergillus oryzae	39.03	1.00e-85	309.00
IUUC-Ate-010333	Aspergillus terreus	37.92	1.00e-78	286.00
IUUC-Ame-011697	Astyanax mexicanus	80.56	0.00e+00	672.00
IUUC-Bgr-012254	Blumeria graminis	37.02	9.00e-82	296.00
IUUC-Bta-012615	Bos taurus	93.86	0.00e+00	748.00
IUUC-Bci-013720	Botrytis cinerea	38.83	2.00e-82	298.00
IUUC-Bdi-014302	Brachypodium distachyon	46.50	2.00e-93	335.00
IUUC-Bol-015594	Brassica oleracea	44.76	3.00e-88	318.00
IUUC-Bra-017465	Brassica rapa	44.50	2.00e-88	318.00
IUUC-Cel-018632	Caenorhabditis elegans	44.50	2.00e-103	369.00
IUUC-Cja-019747	Callithrix jacchus	94.37	0.00e+00	755.00
IUUC-Cfa-020288	Canis familiaris	94.37	0.00e+00	753.00
IUUC-Cpo-021440	Cavia porcellus	91.82	0.00e+00	744.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	46.78	3.00e-86	311.00
IUUC-Csa-023139	Chlorocebus sabaeus	94.29	0.00e+00	666.00
IUUC-Cho-024481	Choloepus hoffmanni	90.03	0.00e+00	708.00
IUUC-Cin-025106	Ciona intestinalis	60.87	7.00e-148	516.00
IUUC-Csv-026087	Ciona savignyi	60.61	3.00e-145	507.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	34.83	4.00e-73	268.00
IUUC-Cne-026793	Cryptococcus neoformans	41.25	3.00e-94	338.00
IUUC-Dre-028723	Danio rerio	80.05	0.00e+00	669.00
IUUC-Dno-029299	Dasypus novemcinctus	94.12	0.00e+00	751.00
IUUC-Dor-030345	Dipodomys ordii	94.20	1.00e-66	246.00
IUUC-Dse-031562	Dothistroma septosporum	36.60	3.00e-79	288.00
IUUC-Dme-031783	Drosophila melanogaster	58.26	4.00e-122	431.00
IUUC-Ete-032669	Echinops telfairi	93.61	0.00e+00	744.00
IUUC-Eca-033566	Equus caballus	94.37	0.00e+00	751.00
IUUC-Eeu-034524	Erinaceus europaeus	96.65	1.00e-143	501.00
IUUC-Fca-036215	Felis catus	94.37	0.00e+00	753.00
IUUC-Fal-037018	Ficedula albicollis	91.16	3.00e-180	624.00
IUUC-Fox-037936	Fusarium oxysporum	36.55	2.00e-75	275.00
IUUC-Fso-038366	Fusarium solani	37.34	5.00e-75	274.00
IUUC-Gmo-038966	Gadus morhua	66.11	1.00e-137	481.00
IUUC-Ggr-039942	Gaeumannomyces graminis	36.55	3.00e-73	268.00
IUUC-Gga-040797	Gallus gallus	90.79	0.00e+00	737.00
IUUC-Gac-042598	Gasterosteus aculeatus	68.85	1.00e-158	551.00
IUUC-Gma-044220	Glycine max	46.96	2.00e-91	328.00
IUUC-Ggo-044682	Gorilla gorilla	94.37	0.00e+00	750.00
IUUC-Hsa-045804	Homo sapiens	94.37	0.00e+00	753.00
IUUC-Hvu-047567	Hordeum vulgare	44.99	2.00e-89	322.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	93.86	0.00e+00	752.00
IUUC-Kpa-049369	Komagataella pastoris	32.27	7.00e-59	220.00
IUUC-Lch-050074	Latimeria chalumnae	79.90	1.00e-178	618.00
IUUC-Lpe-051333	Leersia perrieri	45.94	1.00e-87	316.00
IUUC-Loc-052164	Lepisosteus oculatus	82.86	0.00e+00	684.00
IUUC-Lma-053088	Leptosphaeria maculans	36.03	1.00e-70	259.00
IUUC-Laf-053460	Loxodonta africana	94.37	0.00e+00	754.00
IUUC-Mcc-055859	Macaca mulatta	94.37	0.00e+00	753.00
IUUC-Meu-056134	Macropus eugenii	93.86	0.00e+00	749.00
IUUC-Mor-057251	Magnaporthe oryzae	37.08	4.00e-75	275.00
IUUC-Mpo-057375	Magnaporthe poae	38.80	3.00e-52	197.00
IUUC-Mtr-057656	Medicago truncatula	45.30	9.00e-85	306.00
IUUC-Mla-059145	Melampsora laricipopulina	41.78	1.00e-87	315.00
IUUC-Mga-059855	Meleagris gallopavo	90.79	0.00e+00	736.00
IUUC-Mvi-060372	Microbotryum violaceum	41.73	1.00e-93	336.00
IUUC-Mmr-060826	Microcebus murinus	93.35	0.00e+00	749.00
IUUC-Mdo-062748	Monodelphis domestica	93.61	0.00e+00	747.00
IUUC-Mmu-063351	Mus musculus	93.86	0.00e+00	749.00
IUUC-Mac-064846	Musa acuminata	46.94	1.00e-83	302.00
IUUC-Mpu-066006	Mustela putorius furo	94.37	0.00e+00	753.00
IUUC-Mlu-067398	Myotis lucifugus	93.86	0.00e+00	749.00
IUUC-Nfi-068399	Neosartorya fischeri	38.69	4.00e-86	311.00
IUUC-Ncr-068711	Neurospora crassa	37.08	5.00e-75	274.00
IUUC-Nle-069982	Nomascus leucogenys	94.37	0.00e+00	755.00
IUUC-Opr-070596	Ochotona princeps	94.12	0.00e+00	754.00
IUUC-Ont-072374	Oreochromis niloticus	78.27	0.00e+00	659.00
IUUC-Ocu-074371	Oryctolagus cuniculus	94.12	0.00e+00	751.00
IUUC-Oba-075083	Oryza barthii	45.38	2.00e-87	316.00
IUUC-Obr-076405	Oryza brachyantha	45.38	9.00e-87	313.00
IUUC-Ogl-077683	Oryza glaberrima	45.38	1.00e-87	316.00
IUUC-Ogu-078486	Oryza glumaepatula	45.66	3.00e-87	315.00
IUUC-Oin-079679	Oryza indica	45.38	3.00e-90	325.00
IUUC-Olo-080243	Oryza longistaminata	45.66	3.00e-87	314.00
IUUC-Ome-081230	Oryza meridionalis	45.38	3.00e-90	325.00
IUUC-Oni-082961	Oryza nivara	45.38	2.00e-90	325.00
IUUC-Opu-083189	Oryza punctata	45.10	1.00e-85	309.00
IUUC-Oru-084353	Oryza rufipogon	45.38	4.00e-90	324.00
IUUC-Osa-085458	Oryza sativa	45.38	3.00e-90	325.00
IUUC-Ola-086940	Oryzias latipes	75.39	0.00e+00	643.00
IUUC-Olu-087580	Ostreococcus lucimarinus	35.88	5.00e-60	224.00
IUUC-Oga-088703	Otolemur garnettii	88.24	0.00e+00	701.00
IUUC-Oar-089829	Ovis aries	94.12	0.00e+00	751.00
IUUC-Ptr-090838	Pan troglodytes	94.37	0.00e+00	753.00
IUUC-Pan-092261	Papio anubis	94.12	0.00e+00	753.00
IUUC-Psi-093020	Pelodiscus sinensis	91.56	0.00e+00	741.00
IUUC-Pno-094858	Phaeosphaeria nodorum	36.15	1.00e-68	253.00
IUUC-Ppa-095531	Physcomitrella patens	48.74	7.00e-102	363.00
IUUC-Pfo-096812	Poecilia formosa	69.69	2.00e-166	577.00
IUUC-Pab-097805	Pongo abelii	93.35	0.00e+00	728.00
IUUC-Pop-100051	Populus trichocarpa	48.47	2.00e-93	335.00
IUUC-Pca-100152	Procavia capensis	93.86	0.00e+00	752.00
IUUC-Ppe-101244	Prunus persica	48.19	5.00e-99	353.00
IUUC-Pva-102529	Pteropus vampyrus	89.51	0.00e+00	705.00
IUUC-Pgr-103550	Puccinia graminis	36.78	3.00e-89	322.00
IUUC-Ptt-103951	Puccinia triticina	36.68	8.00e-73	267.00
IUUC-Pte-104151	Pyrenophora teres	36.58	3.00e-69	254.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	37.11	2.00e-70	259.00
IUUC-Rno-105747	Rattus norvegicus	93.61	0.00e+00	747.00
IUUC-Sce-106418	Saccharomyces cerevisiae	34.78	2.00e-62	232.00
IUUC-Sha-107334	Sarcophilus harrisii	93.86	0.00e+00	749.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	37.36	2.00e-61	229.00
IUUC-Spo-108189	Schizosaccharomyces pombe	39.01	1.00e-70	259.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	37.77	5.00e-80	290.00
IUUC-Smo-108924	Selaginella moellendorffii	45.15	5.00e-101	360.00
IUUC-Sit-110102	Setaria italica	45.66	1.00e-88	319.00
IUUC-Sly-111668	Solanum lycopersicum	48.07	2.00e-99	355.00
IUUC-Stu-111928	Solanum tuberosum	47.79	5.00e-99	354.00
IUUC-Sar-113266	Sorex araneus	85.64	0.00e+00	669.00
IUUC-Sbi-114134	Sorghum bicolor	45.66	2.00e-89	322.00
IUUC-Sre-115114	Sporisorium reilianum	44.09	7.00e-94	337.00
IUUC-Ssc-115443	Sus scrofa	94.37	0.00e+00	751.00
IUUC-Tgu-117157	Taeniopygia guttata	90.03	0.00e+00	731.00
IUUC-Tru-118587	Takifugu rubripes	77.49	0.00e+00	665.00
IUUC-Tsy-119157	Tarsius syrichta	94.10	0.00e+00	744.00
IUUC-Tni-120427	Tetraodon nigroviridis	77.24	0.00e+00	662.00
IUUC-Tca-121368	Theobroma cacao	47.38	3.00e-97	348.00
IUUC-Tre-122074	Trichoderma reesei	36.03	1.00e-70	260.00
IUUC-Tvi-122349	Trichoderma virens	35.25	2.00e-69	256.00
IUUC-Tae-123589	Triticum aestivum	43.57	3.00e-86	311.00
IUUC-Tur-125983	Triticum urartu	48.30	3.00e-82	297.00
IUUC-Tme-126951	Tuber melanosporum	41.78	8.00e-91	327.00
IUUC-Tbe-128136	Tupaia belangeri	83.12	0.00e+00	645.00
IUUC-Ttr-129169	Tursiops truncatus	94.51	1.00e-126	445.00
IUUC-Uma-129399	Ustilago maydis	44.77	9.00e-98	350.00
IUUC-Vda-129842	Verticillium dahliae	36.15	5.00e-75	274.00
IUUC-Vpa-130440	Vicugna pacos	94.37	0.00e+00	756.00
IUUC-Vvi-131075	Vitis vinifera	49.58	5.00e-100	358.00
IUUC-Xtr-132713	Xenopus tropicalis	51.40	2.00e-89	322.00
IUUC-Xma-133002	Xiphophorus maculatus	79.39	6.00e-170	589.00
IUUC-Yli-134569	Yarrowia lipolytica	35.91	5.00e-66	244.00
IUUC-Zma-135799	Zea mays	41.42	3.00e-86	311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence