iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011316

Ensembl Protein ID

ENSAMXP00000020987.1

UniProt Accession

W5LMC5; W5LMC5_ASTMX

Genbank Protein ID

ENSAMXP00000020987

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01029852

Gene Name

RNF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000020383.1	ENSAMXT00000020987.1	ENSAMXP00000020987.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	31.8	34	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  +d  ++  CgH+f+  Cl++w         +++CP+C+
   Q: 34   CNICLDTARD-AVISLCGHLFCWPCLHQW---LETRPSRQQCPVCK 75
           99******99.77788*************...55689999*****7 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MAAAAEPRSG GEGHHPGDGD RERDGDGDRA AFECNICLDT ARDAVISLCG HLFCWPCLHQ 60
WLETRPSRQQ CPVCKAGISR DKVIPLYGRG STSQEDPRLK TPPRPQGQRT EPESRGPFHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTCTATCT CCTGAAGCGG GGGGACTTTT ATTAGTGCGG GCTGGGCGGT GTAGGTGTGT 60
TCAGGAGCAG CAGGCTGTCT GTCTGTCTGT GTGTGTCTGT GTGTTAGAGA AAGAGACAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001042	Aegilops tauschii	54.55	1.00e-24	106.00
IUUC-Aml-001417	Ailuropoda melanoleuca	79.67	2.00e-56	211.00
IUUC-Aca-004254	Anolis carolinensis	75.63	2.00e-38	151.00
IUUC-Aly-006065	Arabidopsis lyrata	56.98	8.00e-26	110.00
IUUC-Ath-007267	Arabidopsis thaliana	56.98	2.00e-25	108.00
IUUC-Bta-013109	Bos taurus	78.23	6.00e-56	209.00
IUUC-Bdi-014377	Brachypodium distachyon	50.55	9.00e-24	103.00
IUUC-Bra-017113	Brassica rapa	54.65	4.00e-25	107.00
IUUC-Cel-018228	Caenorhabditis elegans	50.00	2.00e-35	142.00
IUUC-Cja-019902	Callithrix jacchus	77.42	6.00e-55	206.00
IUUC-Cfa-020079	Canis familiaris	78.86	5.00e-56	209.00
IUUC-Cpo-021320	Cavia porcellus	68.59	9.00e-55	205.00
IUUC-Csa-023595	Chlorocebus sabaeus	78.86	3.00e-56	210.00
IUUC-Cgl-026743	Colletotrichum gloeosporioides	38.78	1.00e-08	54.30
IUUC-Dre-027716	Danio rerio	89.76	3.00e-53	201.00
IUUC-Dor-030170	Dipodomys ordii	80.49	1.00e-56	211.00
IUUC-Eca-033642	Equus caballus	72.55	5.00e-59	219.00
IUUC-Eeu-034778	Erinaceus europaeus	80.00	3.00e-43	167.00
IUUC-Fca-036326	Felis catus	79.67	6.00e-57	213.00
IUUC-Fso-038195	Fusarium solani	44.44	1.00e-10	60.80
IUUC-Gac-042258	Gasterosteus aculeatus	91.27	1.00e-64	238.00
IUUC-Ggo-045474	Gorilla gorilla	78.23	6.00e-56	209.00
IUUC-Hsa-046046	Homo sapiens	78.86	6.00e-56	209.00
IUUC-Hvu-047487	Hordeum vulgare	51.00	8.00e-25	106.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	76.52	2.00e-57	214.00
IUUC-Lch-050367	Latimeria chalumnae	79.20	4.00e-50	189.00
IUUC-Laf-053395	Loxodonta africana	78.86	8.00e-56	209.00
IUUC-Mcc-054833	Macaca mulatta	78.86	3.00e-56	210.00
IUUC-Meu-055984	Macropus eugenii	69.62	3.00e-30	124.00
IUUC-Mvi-060316	Microbotryum violaceum	50.85	9.00e-13	67.00
IUUC-Mdo-062437	Monodelphis domestica	69.93	7.00e-60	222.00
IUUC-Mmu-064159	Mus musculus	78.23	6.00e-56	209.00
IUUC-Mac-065390	Musa acuminata	51.06	6.00e-25	107.00
IUUC-Mlu-067689	Myotis lucifugus	68.59	2.00e-57	214.00
IUUC-Ncr-068628	Neurospora crassa	40.74	3.00e-10	59.70
IUUC-Nle-069705	Nomascus leucogenys	78.86	6.00e-56	209.00
IUUC-Ont-072482	Oreochromis niloticus	94.44	5.00e-67	246.00
IUUC-Ocu-074208	Oryctolagus cuniculus	78.05	5.00e-55	206.00
IUUC-Obr-076049	Oryza brachyantha	54.22	6.00e-24	105.00
IUUC-Ola-086507	Oryzias latipes	78.69	5.00e-74	270.00
IUUC-Olu-087623	Ostreococcus lucimarinus	44.87	6.00e-16	77.00
IUUC-Oga-088912	Otolemur garnettii	79.67	2.00e-56	211.00
IUUC-Oar-090284	Ovis aries	78.86	4.00e-56	210.00
IUUC-Ptr-090919	Pan troglodytes	78.86	7.00e-56	209.00
IUUC-Pan-092843	Papio anubis	78.86	3.00e-56	210.00
IUUC-Pno-094942	Phaeosphaeria nodorum	42.50	3.00e-10	59.30
IUUC-Pfo-096818	Poecilia formosa	86.23	3.00e-70	257.00
IUUC-Pab-098244	Pongo abelii	78.86	6.00e-56	209.00
IUUC-Pop-099595	Populus trichocarpa	45.97	4.00e-27	114.00
IUUC-Pca-100319	Procavia capensis	79.03	9.00e-57	212.00
IUUC-Ppe-101752	Prunus persica	55.56	1.00e-25	109.00
IUUC-Pva-102249	Pteropus vampyrus	76.86	3.00e-52	197.00
IUUC-Pte-104163	Pyrenophora teres	45.59	1.00e-09	57.00
IUUC-Pyt-104640	Pyrenophora triticirepentis	36.89	5.00e-10	58.20
IUUC-Rno-106042	Rattus norvegicus	78.23	6.00e-56	209.00
IUUC-Sly-111255	Solanum lycopersicum	49.25	3.00e-27	114.00
IUUC-Stu-112117	Solanum tuberosum	48.80	2.00e-24	105.00
IUUC-Sbi-114178	Sorghum bicolor	37.50	1.00e-22	99.80
IUUC-Ssc-115934	Sus scrofa	79.67	2.00e-56	211.00
IUUC-Tru-118679	Takifugu rubripes	65.52	3.00e-27	113.00
IUUC-Tsy-119615	Tarsius syrichta	75.76	3.00e-57	213.00
IUUC-Tni-120698	Tetraodon nigroviridis	93.58	1.00e-57	214.00
IUUC-Tca-121264	Theobroma cacao	54.95	2.00e-25	108.00
IUUC-Tre-122215	Trichoderma reesei	42.11	5.00e-10	59.70
IUUC-Tae-123670	Triticum aestivum	55.29	1.00e-23	102.00
IUUC-Tur-126676	Triticum urartu	53.33	5.00e-24	103.00
IUUC-Tbe-127773	Tupaia belangeri	79.03	2.00e-54	204.00
IUUC-Vda-129983	Verticillium dahliae	44.90	3.00e-09	54.70
IUUC-Vvi-131449	Vitis vinifera	55.56	5.00e-26	110.00
IUUC-Xtr-132608	Xenopus tropicalis	80.67	3.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence