iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005443

Ensembl Protein ID

fgenesh2_kg.7__111__AT4G39100.1

UniProt Accession

D7MGB3; D7MGB3_ARALL

Genbank Protein ID

EFH45143.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

SHL1; ARALYDRAFT_490678

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__111__AT4G39100.1	fgenesh2_kg.7__111__AT4G39100.1	fgenesh2_kg.7__111__AT4G39100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.50e-09	36.0	141	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C  C+ +++ ++ +v+Ce+C+ewfHp C + ++ee ++ + +++C++C+
   Q: 141  FC-KCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKLD-NFYCEECS 188
           78.7999**************************77777666.5******7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPKQKAPRKQ LKSYKLKHIN KTIQDGDAVL MRSSEPGKPS YVARVEAIET DARGSHAKVR 60
VRWYYRPEES IGGRRQFHGA KEVFLSDHFD FQSADTIEGK CKVHSFSSYT KLDSVGNDDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCGTACGC TCCTGAGATC CCACATGACT TGTTCTCACC ATAGTCCGCG AGACATTTGA 60
TTTTTTCCTG ACGGTATTTT GTCATTGAGA AGACTGATCG CAAAATATTT TCCCTCACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0035067--P:negative regulation of histone acetylation
GO:0009791--P:post-embryonic development
GO:2000028--P:regulation of photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

aly:ARALYDRAFT_490678

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	40.00	5.00e-10	59.30
IUUC-Aca-004346	Anolis carolinensis	34.62	2.00e-10	60.80
IUUC-Ath-006906	Arabidopsis thaliana	96.93	6.00e-134	468.00
IUUC-Ago-007912	Ashbya gossypii	43.33	2.90e-02	32.70
IUUC-Bol-015574	Brassica oleracea	89.08	9.00e-123	431.00
IUUC-Bra-017900	Brassica rapa	89.08	3.00e-122	430.00
IUUC-Cja-018757	Callithrix jacchus	33.85	2.00e-08	54.70
IUUC-Cfa-021156	Canis familiaris	40.00	4.00e-10	60.10
IUUC-Cpo-022284	Cavia porcellus	35.82	1.00e-10	61.60
IUUC-Csa-023515	Chlorocebus sabaeus	35.82	2.00e-10	60.80
IUUC-Cne-026894	Cryptococcus neoformans	38.36	5.00e-09	55.50
IUUC-Dno-029446	Dasypus novemcinctus	34.78	2.00e-10	60.50
IUUC-Ete-032380	Echinops telfairi	34.78	3.00e-10	60.50
IUUC-Eca-034302	Equus caballus	35.82	2.00e-10	60.80
IUUC-Fca-035578	Felis catus	35.82	2.00e-10	60.80
IUUC-Fal-037017	Ficedula albicollis	35.29	1.00e-10	62.00
IUUC-Gmo-038789	Gadus morhua	38.00	9.00e-10	58.90
IUUC-Gga-040290	Gallus gallus	35.29	1.00e-10	62.00
IUUC-Gac-041666	Gasterosteus aculeatus	33.33	7.00e-10	59.30
IUUC-Gma-043965	Glycine max	73.24	2.00e-96	343.00
IUUC-Ggo-044712	Gorilla gorilla	40.00	4.00e-10	60.10
IUUC-Hsa-046760	Homo sapiens	35.82	1.00e-10	62.00
IUUC-Hvu-047723	Hordeum vulgare	60.93	2.00e-75	274.00
IUUC-Kpa-049165	Komagataella pastoris	38.03	8.00e-08	50.80
IUUC-Lch-049793	Latimeria chalumnae	40.00	3.00e-10	60.10
IUUC-Lpe-051138	Leersia perrieri	66.03	1.00e-83	301.00
IUUC-Laf-053656	Loxodonta africana	35.82	2.00e-10	60.80
IUUC-Mcc-055658	Macaca mulatta	35.82	2.00e-10	60.80
IUUC-Mtr-058621	Medicago truncatula	71.63	1.00e-93	334.00
IUUC-Mmr-061132	Microcebus murinus	35.82	1.00e-10	62.00
IUUC-Mdo-062097	Monodelphis domestica	34.33	5.00e-10	59.70
IUUC-Mmu-063458	Mus musculus	35.82	8.00e-11	62.40
IUUC-Mpu-066429	Mustela putorius furo	35.82	2.00e-10	60.80
IUUC-Mlu-067746	Myotis lucifugus	30.59	3.00e-10	60.50
IUUC-Nle-070143	Nomascus leucogenys	35.82	2.00e-10	60.80
IUUC-Ont-072257	Oreochromis niloticus	34.33	8.00e-10	58.90
IUUC-Oan-073654	Ornithorhynchus anatinus	40.00	8.00e-10	58.90
IUUC-Ocu-074417	Oryctolagus cuniculus	36.99	2.00e-10	61.20
IUUC-Oba-075855	Oryza barthii	66.03	2.00e-83	301.00
IUUC-Obr-076353	Oryza brachyantha	70.27	5.00e-79	288.00
IUUC-Ogl-077547	Oryza glaberrima	68.42	5.00e-79	286.00
IUUC-Oin-079179	Oryza indica	64.65	2.00e-84	303.00
IUUC-Ome-081714	Oryza meridionalis	65.73	2.00e-84	303.00
IUUC-Oni-082099	Oryza nivara	65.73	2.00e-84	303.00
IUUC-Osa-085620	Oryza sativa	64.65	2.00e-84	303.00
IUUC-Olu-087802	Ostreococcus lucimarinus	45.51	1.00e-42	165.00
IUUC-Oga-088662	Otolemur garnettii	35.82	2.00e-10	60.50
IUUC-Oar-090332	Ovis aries	35.82	2.00e-10	60.80
IUUC-Ptr-091328	Pan troglodytes	35.82	1.00e-10	61.60
IUUC-Pan-092122	Papio anubis	35.82	2.00e-10	60.80
IUUC-Pma-094621	Petromyzon marinus	35.42	4.00e-08	52.40
IUUC-Pfo-096107	Poecilia formosa	38.00	4.00e-10	60.10
IUUC-Pab-097635	Pongo abelii	35.82	2.00e-10	61.20
IUUC-Pop-098853	Populus trichocarpa	71.83	7.00e-92	328.00
IUUC-Pca-100779	Procavia capensis	33.02	1.00e-11	65.50
IUUC-Ppe-101818	Prunus persica	72.30	9.00e-93	332.00
IUUC-Pva-102839	Pteropus vampyrus	35.82	2.00e-10	60.80
IUUC-Rno-105933	Rattus norvegicus	35.82	2.00e-10	60.80
IUUC-Sce-106421	Saccharomyces cerevisiae	34.94	1.00e-07	50.10
IUUC-Sha-106728	Sarcophilus harrisii	34.33	3.00e-10	56.20
IUUC-Sja-107734	Schizosaccharomyces japonicus	40.00	4.00e-07	50.40
IUUC-Spo-108246	Schizosaccharomyces pombe	36.07	6.00e-08	53.50
IUUC-Sit-110445	Setaria italica	63.72	2.00e-83	300.00
IUUC-Sly-110932	Solanum lycopersicum	69.48	1.00e-90	324.00
IUUC-Stu-112357	Solanum tuberosum	68.54	1.00e-87	314.00
IUUC-Sbi-113989	Sorghum bicolor	64.65	4.00e-84	303.00
IUUC-Ssc-115645	Sus scrofa	35.82	2.00e-10	60.80
IUUC-Tgu-117091	Taeniopygia guttata	35.29	1.00e-10	62.00
IUUC-Tsy-119214	Tarsius syrichta	34.78	2.00e-10	60.80
IUUC-Tca-121689	Theobroma cacao	74.64	1.00e-94	338.00
IUUC-Tae-123050	Triticum aestivum	63.59	6.00e-83	299.00
IUUC-Ttr-128194	Tursiops truncatus	35.82	1.00e-10	62.00
IUUC-Uma-129425	Ustilago maydis	40.62	2.00e-07	50.80
IUUC-Vpa-130595	Vicugna pacos	35.82	2.00e-10	60.80
IUUC-Vvi-131074	Vitis vinifera	71.83	6.00e-92	328.00
IUUC-Xtr-132307	Xenopus tropicalis	40.00	3.00e-10	60.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence