iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-053562

UUCD1 version

UUC-LoA-00316

Ensembl Protein ID

ENSLAFP00000007762.3

UniProt Accession

G3T3E5; G3T3E5_LOXAF

Protein Name

Uncharacterized protein

Gene Name

DDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000009262.3	ENSLAFT00000009263.3	ENSLAFP00000007762.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-13	48.7	241	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+ +vt +a+    d+ll+++s D t+k+WDlr+
   Q: 241  HKKKVTHVALnpcCDWLLATASVDQTVKIWDLRQ 274
           7788899999875559***************986 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MAPRKPPETK KTLEVPKCPK GKRSRSPQEL EQEAKKLFVK GPGSSRRYDS GCLWAGLANL 60
QVLSPYTSIV RALHQHKLGK AAWPMLQQSL QQSFLHSLAS YRIFHKAAPF DRRATSLAWH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCCCA GGAAACCTCC AGAAACCAAG AAGACCCTTG AAGTTCCTAA GTGCCCCAAG 60
GGCAAGAGGA GCAGAAGTCC TCAGGAGCTG GAGCAAGAGG CCAAGAAGCT CTTTGTGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030054--C:cell junction
GO:0031465--C:Cul4B-RING E3 ubiquitin ligase complex
GO:0005654--C:nucleoplasm
GO:0043234--C:protein complex
GO:0003684--F:damaged DNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0035518--P:histone H2A monoubiquitination
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006290--P:pyrimidine dimer repair
GO:0070914--P:UV-damage excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	29.94	1.00e-30	127.00
IUUC-Aml-002203	Ailuropoda melanoleuca	88.50	0.00e+00	758.00
IUUC-Atr-002957	Amborella trichopoda	31.40	6.00e-37	148.00
IUUC-Apl-003832	Anas platyrhynchos	53.61	2.00e-126	445.00
IUUC-Aca-004358	Anolis carolinensis	53.20	3.00e-130	458.00
IUUC-Aly-006296	Arabidopsis lyrata	31.55	1.00e-35	144.00
IUUC-Ath-007115	Arabidopsis thaliana	31.12	3.00e-35	142.00
IUUC-Ame-010817	Astyanax mexicanus	54.21	3.00e-119	422.00
IUUC-Bta-012914	Bos taurus	85.95	0.00e+00	754.00
IUUC-Bdi-014261	Brachypodium distachyon	30.56	3.00e-31	129.00
IUUC-Bol-015317	Brassica oleracea	31.61	5.00e-36	145.00
IUUC-Bra-016848	Brassica rapa	32.00	3.00e-36	146.00
IUUC-Cja-018967	Callithrix jacchus	83.84	0.00e+00	726.00
IUUC-Cfa-021238	Canis familiaris	88.50	0.00e+00	727.00
IUUC-Cpo-022063	Cavia porcellus	76.42	0.00e+00	674.00
IUUC-Csa-023382	Chlorocebus sabaeus	83.61	0.00e+00	751.00
IUUC-Cho-024805	Choloepus hoffmanni	62.06	2.00e-96	345.00
IUUC-Dre-028732	Danio rerio	48.93	5.00e-110	391.00
IUUC-Dor-030461	Dipodomys ordii	76.83	1.00e-120	426.00
IUUC-Ete-033038	Echinops telfairi	75.93	0.00e+00	664.00
IUUC-Eca-033772	Equus caballus	86.65	0.00e+00	714.00
IUUC-Eeu-034662	Erinaceus europaeus	62.50	1.00e-63	236.00
IUUC-Fca-036095	Felis catus	87.59	0.00e+00	736.00
IUUC-Gmo-039683	Gadus morhua	49.59	2.00e-107	382.00
IUUC-Gga-040530	Gallus gallus	54.00	7.00e-126	443.00
IUUC-Gac-041517	Gasterosteus aculeatus	49.86	6.00e-99	353.00
IUUC-Gma-043378	Glycine max	31.02	1.00e-35	144.00
IUUC-Ggo-045364	Gorilla gorilla	84.54	0.00e+00	756.00
IUUC-Hsa-046354	Homo sapiens	84.31	0.00e+00	754.00
IUUC-Hvu-047151	Hordeum vulgare	31.75	6.00e-28	118.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	86.16	0.00e+00	751.00
IUUC-Lpe-051256	Leersia perrieri	30.25	2.00e-30	127.00
IUUC-Loc-052398	Lepisosteus oculatus	54.67	3.00e-130	458.00
IUUC-Mcc-055197	Macaca mulatta	69.56	6.00e-170	589.00
IUUC-Meu-056151	Macropus eugenii	76.45	3.00e-121	427.00
IUUC-Mtr-057940	Medicago truncatula	31.71	1.00e-35	144.00
IUUC-Mga-059923	Meleagris gallopavo	53.78	1.00e-132	466.00
IUUC-Mmr-061465	Microcebus murinus	68.15	3.00e-156	544.00
IUUC-Mdo-063063	Monodelphis domestica	68.66	7.00e-159	553.00
IUUC-Mmu-064294	Mus musculus	79.86	0.00e+00	690.00
IUUC-Mac-065598	Musa acuminata	30.79	2.00e-32	133.00
IUUC-Mpu-066831	Mustela putorius furo	86.85	0.00e+00	744.00
IUUC-Mlu-067222	Myotis lucifugus	82.90	0.00e+00	730.00
IUUC-Nle-069581	Nomascus leucogenys	84.31	0.00e+00	757.00
IUUC-Opr-070644	Ochotona princeps	81.84	0.00e+00	707.00
IUUC-Ont-072605	Oreochromis niloticus	56.30	2.00e-115	409.00
IUUC-Oan-072973	Ornithorhynchus anatinus	73.99	1.00e-154	538.00
IUUC-Ocu-074615	Oryctolagus cuniculus	82.44	0.00e+00	737.00
IUUC-Oba-075283	Oryza barthii	29.01	1.00e-29	124.00
IUUC-Obr-076605	Oryza brachyantha	31.29	1.00e-32	134.00
IUUC-Ogl-077512	Oryza glaberrima	29.01	2.00e-29	124.00
IUUC-Ogu-078329	Oryza glumaepatula	29.01	2.00e-29	124.00
IUUC-Oin-079980	Oryza indica	29.01	2.00e-29	123.00
IUUC-Olo-080516	Oryza longistaminata	28.70	1.00e-29	124.00
IUUC-Ome-081415	Oryza meridionalis	29.01	2.00e-29	124.00
IUUC-Oni-082985	Oryza nivara	29.01	2.00e-29	123.00
IUUC-Opu-084159	Oryza punctata	30.56	3.00e-31	129.00
IUUC-Oru-085137	Oryza rufipogon	29.01	2.00e-29	124.00
IUUC-Osa-085614	Oryza sativa	29.01	2.00e-29	124.00
IUUC-Ola-087044	Oryzias latipes	46.45	7.00e-104	370.00
IUUC-Oga-088274	Otolemur garnettii	86.42	0.00e+00	752.00
IUUC-Oar-089826	Ovis aries	86.18	0.00e+00	762.00
IUUC-Ptr-091631	Pan troglodytes	84.31	0.00e+00	754.00
IUUC-Pan-092535	Papio anubis	84.07	0.00e+00	756.00
IUUC-Psi-093815	Pelodiscus sinensis	55.76	2.00e-126	445.00
IUUC-Pma-094474	Petromyzon marinus	48.69	4.00e-98	351.00
IUUC-Ppa-095414	Physcomitrella patens	29.09	8.00e-28	118.00
IUUC-Pfo-096559	Poecilia formosa	49.05	2.00e-101	362.00
IUUC-Pab-098528	Pongo abelii	84.07	0.00e+00	754.00
IUUC-Pop-100064	Populus trichocarpa	30.33	3.00e-35	142.00
IUUC-Pca-100803	Procavia capensis	89.72	0.00e+00	780.00
IUUC-Ppe-101966	Prunus persica	30.49	7.00e-34	138.00
IUUC-Pva-103213	Pteropus vampyrus	85.48	0.00e+00	717.00
IUUC-Rno-105087	Rattus norvegicus	80.19	0.00e+00	699.00
IUUC-Sha-107466	Sarcophilus harrisii	73.50	8.00e-161	559.00
IUUC-Smo-108958	Selaginella moellendorffii	27.54	4.00e-26	112.00
IUUC-Sit-109968	Setaria italica	29.01	8.00e-29	121.00
IUUC-Sly-111495	Solanum lycopersicum	30.37	1.00e-31	130.00
IUUC-Stu-112182	Solanum tuberosum	25.10	8.00e-14	72.40
IUUC-Sar-113272	Sorex araneus	79.94	1.00e-165	575.00
IUUC-Sbi-114706	Sorghum bicolor	26.39	3.00e-25	109.00
IUUC-Ssc-115437	Sus scrofa	86.89	0.00e+00	757.00
IUUC-Tgu-116602	Taeniopygia guttata	53.86	3.00e-126	444.00
IUUC-Tru-118698	Takifugu rubripes	50.14	2.00e-98	352.00
IUUC-Tsy-119027	Tarsius syrichta	80.26	0.00e+00	649.00
IUUC-Tni-119787	Tetraodon nigroviridis	49.44	5.00e-103	367.00
IUUC-Tca-121447	Theobroma cacao	29.13	8.00e-34	138.00
IUUC-Tae-125839	Triticum aestivum	30.25	5.00e-31	129.00
IUUC-Tur-126724	Triticum urartu	30.25	7.00e-31	128.00
IUUC-Tbe-127680	Tupaia belangeri	66.67	7.00e-144	503.00
IUUC-Ttr-128201	Tursiops truncatus	77.75	0.00e+00	643.00
IUUC-Vpa-130451	Vicugna pacos	68.13	4.00e-104	371.00
IUUC-Vvi-131001	Vitis vinifera	31.31	2.00e-35	144.00
IUUC-Xtr-132266	Xenopus tropicalis	59.34	6.00e-132	464.00
IUUC-Xma-133034	Xiphophorus maculatus	49.29	2.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence