iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108958

Ensembl Protein ID

EFJ07038

UniProt Accession

D8T8H6; D8T8H6_SELML

Genbank Protein ID

EFJ07038.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377690

Gene Name

SELMODRAFT_21554

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_21554	EFJ07038	EFJ07038

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-17	61.3	158	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H+ +vtcl+f   +d+l++sG   g++ +WD+r
   Q: 158  HSRRVTCLEFhptNDKLVISGDKKGQVGIWDYR 190
           999********9766****************86 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

ERESSSSDES SDEDVDDLAA EEEEEKDEEE EIGEEEEEET KEHSAVEGKK GRKKITISLK 60
AAKLCKVCKG KDHQAGFVGS VYLDCPNRPC YLCKRPGHTT ATCPHRLASE HGVTPGIRKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCGGGAGA GTAGCAGCAG CGATGAGAGC TCCGACGAGG ATGTAGACGA TCTTGCGGCG 60
GAGGAGGAGG AGGAGAAAGA TGAAGAAGAA GAGATTGGGG AAGAGGAGGA GGAGGAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50158--ZF_CCHC

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0008270--F:zinc ion binding
GO:0006281--P:DNA repair

KEGG

smo:SELMODRAFT_21554

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	59.68	8.00e-166	576.00
IUUC-Aml-002203	Ailuropoda melanoleuca	26.73	1.00e-24	106.00
IUUC-Atr-002957	Amborella trichopoda	60.68	8.00e-172	595.00
IUUC-Apl-003832	Anas platyrhynchos	30.38	3.00e-34	139.00
IUUC-Aca-004358	Anolis carolinensis	32.80	4.00e-36	145.00
IUUC-Aly-006296	Arabidopsis lyrata	56.12	7.00e-158	549.00
IUUC-Ath-007115	Arabidopsis thaliana	55.20	2.00e-156	545.00
IUUC-Ame-010817	Astyanax mexicanus	31.23	5.00e-38	151.00
IUUC-Bta-012914	Bos taurus	27.51	4.00e-29	121.00
IUUC-Bdi-014261	Brachypodium distachyon	58.75	2.00e-166	578.00
IUUC-Bol-015317	Brassica oleracea	56.55	7.00e-154	536.00
IUUC-Bra-016848	Brassica rapa	55.79	7.00e-153	533.00
IUUC-Cja-018967	Callithrix jacchus	26.95	2.00e-26	112.00
IUUC-Cfa-021238	Canis familiaris	26.22	8.00e-24	103.00
IUUC-Csa-023382	Chlorocebus sabaeus	27.46	5.00e-26	111.00
IUUC-Cho-024931	Choloepus hoffmanni	27.32	6.00e-10	58.50
IUUC-Dre-028732	Danio rerio	29.54	3.00e-30	125.00
IUUC-Dor-030554	Dipodomys ordii	29.31	1.00e-25	110.00
IUUC-Ete-033038	Echinops telfairi	26.36	4.00e-26	111.00
IUUC-Eca-033772	Equus caballus	27.54	1.00e-25	110.00
IUUC-Eeu-035234	Erinaceus europaeus	32.03	1.00e-13	70.90
IUUC-Fca-036095	Felis catus	26.43	1.00e-23	103.00
IUUC-Gmo-039683	Gadus morhua	29.67	2.00e-37	148.00
IUUC-Gga-040530	Gallus gallus	29.97	9.00e-35	140.00
IUUC-Gma-043378	Glycine max	59.02	2.00e-166	578.00
IUUC-Ggo-045364	Gorilla gorilla	27.84	2.00e-27	116.00
IUUC-Hsa-046354	Homo sapiens	27.84	2.00e-27	116.00
IUUC-Hvu-047151	Hordeum vulgare	61.13	4.00e-109	387.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	27.93	3.00e-26	112.00
IUUC-Lpe-051256	Leersia perrieri	57.74	1.00e-159	555.00
IUUC-Loc-052398	Lepisosteus oculatus	29.47	7.00e-33	134.00
IUUC-Laf-053562	Loxodonta africana	27.54	1.00e-26	113.00
IUUC-Mcc-055197	Macaca mulatta	27.87	4.00e-22	98.20
IUUC-Meu-056151	Macropus eugenii	32.74	3.00e-25	107.00
IUUC-Mtr-057940	Medicago truncatula	58.00	2.00e-166	577.00
IUUC-Mga-059923	Meleagris gallopavo	30.77	3.00e-37	149.00
IUUC-Mmr-061520	Microcebus murinus	30.22	1.00e-24	107.00
IUUC-Mdo-063063	Monodelphis domestica	30.12	5.00e-32	130.00
IUUC-Mmu-064294	Mus musculus	27.54	5.00e-27	114.00
IUUC-Mac-065598	Musa acuminata	56.20	8.00e-161	559.00
IUUC-Mpu-066486	Mustela putorius furo	29.91	1.00e-24	107.00
IUUC-Nle-069581	Nomascus leucogenys	27.54	2.00e-27	115.00
IUUC-Opr-070644	Ochotona princeps	28.96	2.00e-27	115.00
IUUC-Ont-072605	Oreochromis niloticus	29.32	1.00e-31	130.00
IUUC-Oan-072973	Ornithorhynchus anatinus	31.21	2.00e-30	125.00
IUUC-Ocu-074615	Oryctolagus cuniculus	28.74	8.00e-28	117.00
IUUC-Oba-075283	Oryza barthii	58.85	1.00e-151	528.00
IUUC-Obr-076605	Oryza brachyantha	60.86	4.00e-167	580.00
IUUC-Ogl-077512	Oryza glaberrima	59.60	5.00e-156	543.00
IUUC-Ogu-078329	Oryza glumaepatula	58.85	1.00e-151	529.00
IUUC-Oin-079980	Oryza indica	58.63	3.00e-151	527.00
IUUC-Olo-080516	Oryza longistaminata	59.24	2.00e-148	517.00
IUUC-Ome-081415	Oryza meridionalis	58.72	6.00e-155	540.00
IUUC-Oni-082985	Oryza nivara	58.63	3.00e-151	527.00
IUUC-Opu-084159	Oryza punctata	60.83	3.00e-165	574.00
IUUC-Oru-085137	Oryza rufipogon	59.64	7.00e-157	546.00
IUUC-Osa-085614	Oryza sativa	59.64	8.00e-157	546.00
IUUC-Ola-087044	Oryzias latipes	28.42	5.00e-33	134.00
IUUC-Oga-088274	Otolemur garnettii	27.81	4.00e-27	114.00
IUUC-Oar-089826	Ovis aries	27.22	8.00e-29	120.00
IUUC-Ptr-091631	Pan troglodytes	27.84	2.00e-27	116.00
IUUC-Pan-092535	Papio anubis	28.06	1.00e-27	116.00
IUUC-Psi-093815	Pelodiscus sinensis	30.29	3.00e-30	125.00
IUUC-Pma-094474	Petromyzon marinus	29.76	3.00e-32	131.00
IUUC-Ppa-095414	Physcomitrella patens	64.19	0.00e+00	629.00
IUUC-Pfo-096559	Poecilia formosa	30.26	8.00e-34	137.00
IUUC-Pab-098528	Pongo abelii	27.76	2.00e-27	115.00
IUUC-Pop-100064	Populus trichocarpa	59.73	5.00e-168	583.00
IUUC-Pca-100803	Procavia capensis	27.63	8.00e-26	110.00
IUUC-Pva-103213	Pteropus vampyrus	27.63	4.00e-27	115.00
IUUC-Rno-105087	Rattus norvegicus	28.18	2.00e-27	116.00
IUUC-Sha-107466	Sarcophilus harrisii	31.52	1.00e-34	139.00
IUUC-Sit-109968	Setaria italica	59.26	8.00e-155	539.00
IUUC-Sly-111495	Solanum lycopersicum	57.73	2.00e-161	561.00
IUUC-Sar-113272	Sorex araneus	26.63	3.00e-25	108.00
IUUC-Sbi-114706	Sorghum bicolor	57.37	1.00e-146	512.00
IUUC-Tgu-116602	Taeniopygia guttata	29.03	1.00e-32	133.00
IUUC-Tsy-119027	Tarsius syrichta	28.87	5.00e-22	97.80
IUUC-Tni-119787	Tetraodon nigroviridis	29.19	3.00e-36	145.00
IUUC-Tca-121447	Theobroma cacao	59.45	2.00e-164	571.00
IUUC-Tae-123253	Triticum aestivum	60.22	2.00e-169	588.00
IUUC-Tur-126724	Triticum urartu	62.07	2.00e-169	588.00
IUUC-Tbe-127680	Tupaia belangeri	27.76	2.00e-19	89.00
IUUC-Vvi-131001	Vitis vinifera	58.72	1.00e-168	585.00
IUUC-Xtr-132266	Xenopus tropicalis	31.80	4.00e-36	145.00
IUUC-Xma-133034	Xiphophorus maculatus	30.00	2.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence