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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007666
Ensembl Protein ID AT5G10940.1
UniProt Accession Q94BQ3; Q94BQ3_ARATH
Genbank Protein ID AAK64141.1; AAN12885.1; AED91611.1
Protein Name Putative uncharacterized protein At5g10940; Transducin family protein / WD-40 repeat family protein
Genbank Nucleotide ID AY039964; AY150424; CP002688
Gene Name ASG2; ALTERED SEED GERMINATION 2; At5g10940; T30N20.210; T30N20_210
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G10940 AT5G10940.1 AT5G10940.1
AT5G10940 AT5G10940.2 AT5G10940.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINAHINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.10e-22 77.9 48 86
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v++la+ s+  ll+sGsdD  i +W++++ +ll+
   Q: 48   GHQGCVNALAWnSNgSLLISGSDDLRINIWNYSSRKLLH 86
           8**********96679***************99888776 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MDNLSFHDGN IFNLLHTRSQ DPSHEVDQRM QFHSSLVRRL SQEQELEGHQ GCVNALAWNS 60
NGSLLISGSD DLRINIWNYS SRKLLHSIDT GHTANIFCTK FVPETSDELV VSGAGDAEVR 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007666|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACCGAGAATG TAGAACCGGG CACGAGAAAT AGCGTCAGAT TACAAAGAGC CAAAGAAGGA 60
GGGCTTCTTC TTCCAATTTG TGATCGGTGC TGATCGATTT CTCCATGGAT AATCTCAGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007666|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000083 Aegilops tauschii 48.20 0.00e+00 627.00
IUUC-Aml-001699 Ailuropoda melanoleuca 30.16 3.00e-54 206.00
IUUC-Atr-002509 Amborella trichopoda 60.85 1.00e-176 612.00
IUUC-Apl-003379 Anas platyrhynchos 31.36 4.00e-53 202.00
IUUC-Aca-005202 Anolis carolinensis 30.50 3.00e-50 192.00
IUUC-Aly-006475 Arabidopsis lyrata 95.91 0.00e+00 1457.00
IUUC-Acl-008211 Aspergillus clavatus 30.11 4.00e-31 129.00
IUUC-Afl-008592 Aspergillus flavus 30.92 1.00e-31 131.00
IUUC-Afu-008828 Aspergillus fumigatus 30.91 7.00e-31 129.00
IUUC-Ani-009263 Aspergillus nidulans 29.69 2.00e-30 127.00
IUUC-Ang-009671 Aspergillus niger 30.15 3.00e-30 127.00
IUUC-Aor-010229 Aspergillus oryzae 31.29 8.00e-32 131.00
IUUC-Ate-010555 Aspergillus terreus 31.99 4.00e-33 136.00
IUUC-Bdi-014100 Brachypodium distachyon 57.92 0.00e+00 880.00
IUUC-Bol-016409 Brassica oleracea 89.43 0.00e+00 1405.00
IUUC-Bra-016979 Brassica rapa 89.58 0.00e+00 1403.00
IUUC-Cel-018561 Caenorhabditis elegans 24.84 3.00e-24 106.00
IUUC-Cja-019212 Callithrix jacchus 28.44 1.00e-44 174.00
IUUC-Cfa-020200 Canis familiaris 30.16 3.00e-54 206.00
IUUC-Cpo-021739 Cavia porcellus 31.26 2.00e-53 203.00
IUUC-Cre-022659 Chlamydomonas reinhardtii 36.07 1.00e-34 140.00
IUUC-Csa-023648 Chlorocebus sabaeus 30.11 2.00e-53 203.00
IUUC-Csv-026289 Ciona savignyi 30.17 5.00e-50 191.00
IUUC-Cme-027316 Cyanidioschyzon merolae 31.42 2.00e-30 127.00
IUUC-Dre-028745 Danio rerio 29.23 2.00e-47 182.00
IUUC-Dno-029403 Dasypus novemcinctus 31.15 9.00e-54 204.00
IUUC-Dor-030332 Dipodomys ordii 27.24 7.00e-40 158.00
IUUC-Dse-031250 Dothistroma septosporum 30.84 4.00e-32 133.00
IUUC-Dme-031811 Drosophila melanogaster 32.39 1.00e-55 210.00
IUUC-Eca-033783 Equus caballus 30.95 2.00e-53 202.00
IUUC-Eeu-034732 Erinaceus europaeus 30.75 2.00e-52 199.00
IUUC-Fca-036543 Felis catus 30.16 3.00e-54 206.00
IUUC-Fal-037245 Ficedula albicollis 30.65 2.00e-52 199.00
IUUC-Gmo-039346 Gadus morhua 30.28 1.00e-49 190.00
IUUC-Gga-041034 Gallus gallus 31.36 5.00e-53 201.00
IUUC-Gac-041297 Gasterosteus aculeatus 30.35 2.00e-47 183.00
IUUC-Gma-042727 Glycine max 67.14 0.00e+00 982.00
IUUC-Ggo-045309 Gorilla gorilla 30.11 2.00e-53 203.00
IUUC-Hsa-046622 Homo sapiens 30.11 2.00e-53 203.00
IUUC-Lch-049810 Latimeria chalumnae 30.44 3.00e-50 192.00
IUUC-Lpe-051600 Leersia perrieri 58.09 0.00e+00 815.00
IUUC-Loc-052088 Lepisosteus oculatus 31.67 8.00e-54 204.00
IUUC-Lma-053032 Leptosphaeria maculans 31.21 9.00e-29 122.00
IUUC-Laf-054097 Loxodonta africana 30.95 2.00e-53 203.00
IUUC-Mcc-054848 Macaca mulatta 30.11 2.00e-53 203.00
IUUC-Mtr-057735 Medicago truncatula 67.72 0.00e+00 998.00
IUUC-Mga-059622 Meleagris gallopavo 31.36 4.00e-53 202.00
IUUC-Mmr-060709 Microcebus murinus 30.95 4.00e-53 202.00
IUUC-Mdo-062401 Monodelphis domestica 31.83 1.00e-52 200.00
IUUC-Mmu-063899 Mus musculus 31.42 1.00e-52 200.00
IUUC-Mac-064840 Musa acuminata 62.79 0.00e+00 933.00
IUUC-Mpu-066268 Mustela putorius furo 30.48 6.00e-54 204.00
IUUC-Mlu-067211 Myotis lucifugus 31.67 3.00e-43 168.00
IUUC-Nfi-068606 Neosartorya fischeri 31.23 1.00e-31 131.00
IUUC-Nle-070019 Nomascus leucogenys 29.89 6.00e-52 198.00
IUUC-Opr-071008 Ochotona princeps 30.73 2.00e-54 206.00
IUUC-Ont-072123 Oreochromis niloticus 30.49 2.00e-50 193.00
IUUC-Ocu-074166 Oryctolagus cuniculus 30.73 2.00e-54 206.00
IUUC-Oba-075298 Oryza barthii 56.12 0.00e+00 813.00
IUUC-Obr-076849 Oryza brachyantha 56.75 0.00e+00 819.00
IUUC-Ogl-077515 Oryza glaberrima 56.12 0.00e+00 812.00
IUUC-Ogu-077968 Oryza glumaepatula 56.49 0.00e+00 771.00
IUUC-Oin-079231 Oryza indica 55.56 0.00e+00 695.00
IUUC-Olo-081045 Oryza longistaminata 55.72 0.00e+00 812.00
IUUC-Ome-081395 Oryza meridionalis 55.19 0.00e+00 798.00
IUUC-Oni-082801 Oryza nivara 55.99 0.00e+00 811.00
IUUC-Opu-083585 Oryza punctata 54.95 0.00e+00 828.00
IUUC-Oru-085163 Oryza rufipogon 57.20 0.00e+00 809.00
IUUC-Osa-085550 Oryza sativa 69.14 8.00e-110 389.00
IUUC-Ola-086925 Oryzias latipes 30.68 9.00e-50 191.00
IUUC-Oga-088095 Otolemur garnettii 30.49 9.00e-54 204.00
IUUC-Oar-090285 Ovis aries 31.15 3.00e-53 202.00
IUUC-Ptr-091221 Pan troglodytes 30.11 2.00e-53 203.00
IUUC-Pan-091771 Papio anubis 30.11 2.00e-53 203.00
IUUC-Psi-093977 Pelodiscus sinensis 30.50 4.00e-52 198.00
IUUC-Pno-095149 Phaeosphaeria nodorum 45.24 1.00e-15 78.20
IUUC-Ppa-095373 Physcomitrella patens 53.74 0.00e+00 768.00
IUUC-Pfo-096640 Poecilia formosa 30.30 3.00e-50 192.00
IUUC-Pab-098513 Pongo abelii 30.11 2.00e-53 203.00
IUUC-Pop-098837 Populus trichocarpa 71.07 0.00e+00 1082.00
IUUC-Pca-101095 Procavia capensis 26.19 2.00e-33 136.00
IUUC-Ppe-101507 Prunus persica 69.62 0.00e+00 1059.00
IUUC-Pva-102444 Pteropus vampyrus 31.49 1.00e-53 203.00
IUUC-Pte-104187 Pyrenophora teres 31.86 5.00e-28 119.00
IUUC-Pyt-104546 Pyrenophora triticirepentis 32.61 3.00e-29 123.00
IUUC-Rno-105952 Rattus norvegicus 31.62 5.00e-53 201.00
IUUC-Sha-106614 Sarcophilus harrisii 31.83 8.00e-54 204.00
IUUC-Spo-108129 Schizosaccharomyces pombe 31.34 3.00e-33 136.00
IUUC-Smo-108844 Selaginella moellendorffii 49.31 0.00e+00 650.00
IUUC-Sit-110154 Setaria italica 56.60 0.00e+00 858.00
IUUC-Sly-111707 Solanum lycopersicum 65.62 0.00e+00 983.00
IUUC-Sar-113129 Sorex araneus 28.07 1.00e-30 127.00
IUUC-Sbi-113858 Sorghum bicolor 56.54 0.00e+00 826.00
IUUC-Ssc-116275 Sus scrofa 30.95 2.00e-53 202.00
IUUC-Tgu-117507 Taeniopygia guttata 31.16 8.00e-53 201.00
IUUC-Tru-117969 Takifugu rubripes 31.18 3.00e-50 192.00
IUUC-Tsy-119374 Tarsius syrichta 37.30 2.00e-36 146.00
IUUC-Tni-119887 Tetraodon nigroviridis 30.59 6.00e-50 191.00
IUUC-Tca-121722 Theobroma cacao 72.55 0.00e+00 1100.00
IUUC-Tae-124583 Triticum aestivum 56.57 0.00e+00 852.00
IUUC-Tur-125968 Triticum urartu 51.99 0.00e+00 759.00
IUUC-Tme-126910 Tuber melanosporum 29.39 5.00e-30 125.00
IUUC-Ttr-128390 Tursiops truncatus 30.16 6.00e-54 204.00
IUUC-Uma-129509 Ustilago maydis 32.09 3.00e-16 79.70
IUUC-Vvi-131565 Vitis vinifera 69.40 0.00e+00 951.00
IUUC-Xtr-132290 Xenopus tropicalis 31.94 6.00e-50 191.00
IUUC-Xma-134025 Xiphophorus maculatus 29.14 2.00e-50 192.00
IUUC-Zma-135624 Zea mays 54.46 0.00e+00 774.00
Created Date 25-Jun-2017

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