iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099059

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_825397; POPTR_0016s13950g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s13950	POPTR_0016s13950.1	POPTR_0016s13950.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-08	36.2	1282	1312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H +s t+l+     ++++sGs    ik+++l
   Q: 1282 HRGSLTALSVhRHaPIIASGSAKQIIKLFSL 1312
           889999999886679*********9*99986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MALGDLTASR LSSQSSVALI SNHYDDFPSN RDSDIASTSN YGGGNATTGS TAATTTSMAY 60
LPQSAVLSEL RHEAFEASVP TGPSDSGPVS KWRPKDRMKT GYVALVLCLN ISVDPPDVIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTCTCTC GTTGCGCCTC CACACTGCTC TATGCGCGCC CCCCTCCTCC TCCACCACCG 60
CAACCACCGC AGTGACAACC ACGACCATCC TCCACCACCA CACCACCGAG CTGGATTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR029030--Caspase-like_dom
IPR004083--Raptor
IPR029347--Raptor_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF14538--Raptor_N

SMART

SM01302--Raptor_N
SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0031931--C:TORC1 complex
GO:0030674--F:protein binding, bridging
GO:0071230--P:cellular response to amino acid stimulus
GO:0009267--P:cellular response to starvation
GO:0030307--P:positive regulation of cell growth
GO:0071902--P:positive regulation of protein serine/threonine kinase activity
GO:0010506--P:regulation of autophagy
GO:0008361--P:regulation of cell size
GO:0031929--P:TOR signaling

KEGG

pop:POPTR_0016s13950g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001499	Ailuropoda melanoleuca	41.98	0.00e+00	944.00
IUUC-Aca-004449	Anolis carolinensis	53.91	0.00e+00	637.00
IUUC-Acl-008215	Aspergillus clavatus	48.71	0.00e+00	653.00
IUUC-Afl-008401	Aspergillus flavus	48.71	0.00e+00	654.00
IUUC-Afu-008797	Aspergillus fumigatus	48.56	0.00e+00	651.00
IUUC-Ani-009268	Aspergillus nidulans	48.21	0.00e+00	643.00
IUUC-Ang-009608	Aspergillus niger	48.84	0.00e+00	647.00
IUUC-Aor-009894	Aspergillus oryzae	48.71	0.00e+00	654.00
IUUC-Ate-010357	Aspergillus terreus	48.06	0.00e+00	643.00
IUUC-Bci-013736	Botrytis cinerea	49.09	3.00e-177	615.00
IUUC-Bdi-015042	Brachypodium distachyon	71.57	0.00e+00	1714.00
IUUC-Cja-018939	Callithrix jacchus	41.99	0.00e+00	936.00
IUUC-Cfa-020898	Canis familiaris	42.36	0.00e+00	949.00
IUUC-Cpo-021514	Cavia porcellus	41.75	0.00e+00	944.00
IUUC-Csa-023314	Chlorocebus sabaeus	41.99	0.00e+00	942.00
IUUC-Cin-025701	Ciona intestinalis	55.04	0.00e+00	743.00
IUUC-Cgl-026561	Colletotrichum gloeosporioides	37.24	0.00e+00	724.00
IUUC-Cme-027253	Cyanidioschyzon merolae	66.27	3.00e-71	263.00
IUUC-Dno-029901	Dasypus novemcinctus	39.92	0.00e+00	819.00
IUUC-Dor-030140	Dipodomys ordii	38.20	0.00e+00	775.00
IUUC-Dme-031670	Drosophila melanogaster	53.79	0.00e+00	664.00
IUUC-Ete-032578	Echinops telfairi	72.00	2.00e-67	250.00
IUUC-Eca-034076	Equus caballus	41.69	0.00e+00	942.00
IUUC-Fca-035651	Felis catus	42.08	0.00e+00	951.00
IUUC-Ggr-039836	Gaeumannomyces graminis	48.03	1.00e-168	587.00
IUUC-Hsa-045887	Homo sapiens	41.99	0.00e+00	944.00
IUUC-Itr-048274	Ictidomys tridecemlineatus	45.08	5.00e-70	257.00
IUUC-Lma-052993	Leptosphaeria maculans	47.72	0.00e+00	634.00
IUUC-Mcc-055591	Macaca mulatta	41.99	0.00e+00	942.00
IUUC-Mor-057204	Magnaporthe oryzae	48.18	9.00e-170	591.00
IUUC-Mpo-057532	Magnaporthe poae	47.60	7.00e-167	581.00
IUUC-Mmr-060874	Microcebus murinus	55.99	0.00e+00	748.00
IUUC-Mmu-063264	Mus musculus	42.01	0.00e+00	948.00
IUUC-Mpu-065899	Mustela putorius furo	40.91	0.00e+00	860.00
IUUC-Mlu-067344	Myotis lucifugus	39.50	0.00e+00	630.00
IUUC-Nfi-068615	Neosartorya fischeri	48.56	0.00e+00	651.00
IUUC-Ncr-068744	Neurospora crassa	47.13	8.00e-160	557.00
IUUC-Nle-069014	Nomascus leucogenys	42.00	0.00e+00	937.00
IUUC-Oan-073253	Ornithorhynchus anatinus	28.51	3.00e-29	122.00
IUUC-Ocu-074290	Oryctolagus cuniculus	22.77	1.00e-12	67.00
IUUC-Oba-075130	Oryza barthii	68.49	0.00e+00	1615.00
IUUC-Obr-076161	Oryza brachyantha	69.36	0.00e+00	1761.00
IUUC-Ogl-077800	Oryza glaberrima	70.09	0.00e+00	1672.00
IUUC-Ogu-078292	Oryza glumaepatula	83.61	4.00e-58	218.00
IUUC-Oin-079895	Oryza indica	66.83	0.00e+00	1485.00
IUUC-Olo-080598	Oryza longistaminata	63.91	9.00e-171	592.00
IUUC-Oni-082236	Oryza nivara	71.06	4.00e-118	419.00
IUUC-Oru-085086	Oryza rufipogon	60.87	0.00e+00	1352.00
IUUC-Osa-086012	Oryza sativa	71.51	0.00e+00	1663.00
IUUC-Ola-086662	Oryzias latipes	38.68	0.00e+00	734.00
IUUC-Oga-088053	Otolemur garnettii	40.52	0.00e+00	867.00
IUUC-Ptr-090868	Pan troglodytes	41.79	0.00e+00	947.00
IUUC-Pan-092259	Papio anubis	41.99	0.00e+00	942.00
IUUC-Psi-093641	Pelodiscus sinensis	54.23	0.00e+00	665.00
IUUC-Pno-094789	Phaeosphaeria nodorum	47.42	1.00e-175	610.00
IUUC-Pab-097545	Pongo abelii	31.75	6.00e-80	291.00
IUUC-Pva-103245	Pteropus vampyrus	50.00	4.00e-129	456.00
IUUC-Pgr-103460	Puccinia graminis	45.96	5.00e-46	180.00
IUUC-Pte-104367	Pyrenophora teres	47.49	2.00e-180	626.00
IUUC-Pyt-104771	Pyrenophora triticirepentis	50.95	2.00e-173	603.00
IUUC-Rno-104965	Rattus norvegicus	42.01	0.00e+00	948.00
IUUC-Sha-106474	Sarcophilus harrisii	37.80	0.00e+00	635.00
IUUC-Spo-108057	Schizosaccharomyces pombe	50.00	0.00e+00	629.00
IUUC-Ssl-108423	Sclerotinia sclerotiorum	49.24	1.00e-176	613.00
IUUC-Ssc-115398	Sus scrofa	37.10	7.00e-178	617.00
IUUC-Tni-119757	Tetraodon nigroviridis	41.42	0.00e+00	915.00
IUUC-Vda-129990	Verticillium dahliae	36.38	0.00e+00	646.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence