iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   ++ ++vlp C+H fh +C+  w         + +CP Cr
   Q: 105  CAICLGEFadgER-VRVLPpCNHSFHMSCIDTW------LVSHSSCPNCR 147
           ********55444.999999*************......99********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MHRLLLESHG GGNETSGSGG GDGYTRDMNF DANMVIILAA LLCALILALG LNSILRCAMR 60
CGFGLSSSAA AGTVADRAGL KKRELKKFPV AEYGSGEVKI AATECAICLG EFADGERVRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGACAAT CAAAGAGACA AAAGCAGAGT TTAACTTAAA GAGTCCTGTC CTCCTCATCA 60
TCACGTCTCT CCCGAACACA AATTCAAAAG AAGACACAAA TCGACGCCGG AGACTCATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G01880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001916	Ailuropoda melanoleuca	42.68	5.00e-14	72.40
IUUC-Apl-004188	Anas platyrhynchos	42.17	3.00e-14	73.60
IUUC-Aly-005850	Arabidopsis lyrata	93.71	3.00e-57	213.00
IUUC-Bta-012478	Bos taurus	41.98	2.00e-13	70.90
IUUC-Bol-016217	Brassica oleracea	82.91	2.00e-59	220.00
IUUC-Bra-017407	Brassica rapa	82.91	3.00e-59	219.00
IUUC-Cja-019504	Callithrix jacchus	42.68	5.00e-14	72.40
IUUC-Cfa-020048	Canis familiaris	42.68	6.00e-14	72.40
IUUC-Cpo-021725	Cavia porcellus	41.46	6.00e-14	72.40
IUUC-Csa-023586	Chlorocebus sabaeus	42.68	6.00e-14	72.40
IUUC-Cho-024867	Choloepus hoffmanni	42.17	4.00e-14	73.20
IUUC-Dno-029370	Dasypus novemcinctus	42.68	5.00e-14	72.80
IUUC-Dor-030816	Dipodomys ordii	42.17	3.00e-14	73.60
IUUC-Ete-033060	Echinops telfairi	42.68	4.00e-14	72.80
IUUC-Eca-034044	Equus caballus	42.68	5.00e-14	72.40
IUUC-Fca-036000	Felis catus	42.68	6.00e-14	72.40
IUUC-Fal-037147	Ficedula albicollis	42.17	3.00e-14	73.60
IUUC-Gmo-039099	Gadus morhua	50.00	9.00e-14	71.20
IUUC-Gga-041243	Gallus gallus	42.17	3.00e-14	73.20
IUUC-Gac-041340	Gasterosteus aculeatus	51.92	5.00e-14	72.00
IUUC-Gma-042817	Glycine max	59.28	4.00e-39	153.00
IUUC-Ggo-044953	Gorilla gorilla	42.68	6.00e-14	72.40
IUUC-Hsa-046484	Homo sapiens	42.68	6.00e-14	72.40
IUUC-Itr-048470	Ictidomys tridecemlineatus	42.17	5.00e-14	72.80
IUUC-Lpe-050718	Leersia perrieri	61.48	3.00e-30	124.00
IUUC-Loc-051830	Lepisosteus oculatus	55.32	2.00e-12	67.00
IUUC-Laf-053975	Loxodonta africana	42.68	2.00e-14	74.30
IUUC-Mcc-055302	Macaca mulatta	42.68	6.00e-14	72.40
IUUC-Meu-056263	Macropus eugenii	42.17	2.00e-14	73.90
IUUC-Mga-059706	Meleagris gallopavo	42.17	3.00e-14	73.20
IUUC-Mmr-061372	Microcebus murinus	42.17	5.00e-14	72.80
IUUC-Mdo-062651	Monodelphis domestica	43.90	8.00e-15	75.10
IUUC-Mmu-064339	Mus musculus	42.68	2.00e-14	74.30
IUUC-Mlu-067058	Myotis lucifugus	42.68	4.00e-14	72.80
IUUC-Nle-069886	Nomascus leucogenys	42.68	6.00e-14	72.40
IUUC-Opr-070218	Ochotona princeps	42.17	5.00e-14	72.40
IUUC-Ont-072483	Oreochromis niloticus	42.17	3.00e-14	73.60
IUUC-Oan-073718	Ornithorhynchus anatinus	43.37	4.00e-15	76.30
IUUC-Oba-075857	Oryza barthii	55.88	5.00e-31	127.00
IUUC-Ogu-078991	Oryza glumaepatula	50.88	6.00e-28	117.00
IUUC-Oin-079368	Oryza indica	50.88	3.00e-28	117.00
IUUC-Ome-081555	Oryza meridionalis	54.62	8.00e-28	115.00
IUUC-Oni-082477	Oryza nivara	50.88	4.00e-28	117.00
IUUC-Opu-084071	Oryza punctata	60.00	3.00e-28	117.00
IUUC-Oru-085208	Oryza rufipogon	50.88	4.00e-28	117.00
IUUC-Osa-086273	Oryza sativa	50.88	4.00e-28	117.00
IUUC-Oga-088362	Otolemur garnettii	42.68	8.00e-14	72.00
IUUC-Oar-090197	Ovis aries	41.98	1.00e-13	70.90
IUUC-Ptr-091350	Pan troglodytes	42.68	6.00e-14	72.80
IUUC-Pan-091700	Papio anubis	42.68	7.00e-14	72.40
IUUC-Psi-093301	Pelodiscus sinensis	42.17	2.00e-14	73.90
IUUC-Pfo-096917	Poecilia formosa	42.17	6.00e-14	72.00
IUUC-Pab-097932	Pongo abelii	42.68	6.00e-14	72.40
IUUC-Pca-101054	Procavia capensis	42.68	4.00e-14	73.20
IUUC-Pva-102879	Pteropus vampyrus	42.17	5.00e-14	72.80
IUUC-Sha-106507	Sarcophilus harrisii	42.17	4.00e-14	72.80
IUUC-Smo-109408	Selaginella moellendorffii	47.95	2.00e-18	84.70
IUUC-Sar-113182	Sorex araneus	42.35	4.00e-15	76.30
IUUC-Ssc-116087	Sus scrofa	40.96	7.00e-15	73.20
IUUC-Tru-118502	Takifugu rubripes	54.35	3.00e-12	66.60
IUUC-Tsy-119210	Tarsius syrichta	42.68	6.00e-14	72.40
IUUC-Tca-121477	Theobroma cacao	60.87	4.00e-43	167.00
IUUC-Tae-125052	Triticum aestivum	56.03	5.00e-29	119.00
IUUC-Xtr-132280	Xenopus tropicalis	50.00	4.00e-12	66.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence