iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115671

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU462938

Gene Name

USP47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000013402.2	ENSSSCT00000014642.2	ENSSSCP00000014247.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.90e-53	181.5	2	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 141  lisdlFqgqlksqikclecdnvssreepfldlslpvpgke.etkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPe 228
           li++l+qg+lk+ ++clec+ +  r ++ ld++l ++    +++  s++++L++f ++e l+g n+y+ce+ckkk++a+k l++ ++P 
   Q: 2    LINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGsSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPY 90
           799*********************************9554045678******************************************* PP
   S: 229  vLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqke........................................... 274
            L+l+LkRf f+ ++++r+k+n++++fp+eLd+s f   ++ek+ +                                           
   Q: 91   LLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQtesctdsgaenegschsdqmsndfsnddgvdegiclennsgte 179
           ***********************************999977776667888888889999999999999999999999999999999999 PP
   S: 275  ..........kkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetg................staYvlfYk 336
                     + +YeL++v+vHsGs+ +GHY+a++k+ +++ W+ f+D++V+ +++e++++++g                ++aY+l+Y+
   Q: 180  kiskpgleknSLIYELFSVMVHSGSAAGGHYYACIKSFSDEqWYSFNDQHVSRITQEDIKKTHGgssgsrgyyssafassTNAYMLIYR 268
           9999999999***************************65555*******************888************************8 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

DLINELYQGK LKDYVRCLEC GYEGWRIDTY LDIPLVIRPY GSSQAFASVE EALHAFIQPE 60
ILDGPNQYFC ERCKKKCDAR KGLRFLHFPY LLTLQLKRFD FDYTTMHRIK LNDRMTFPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNGATC TTATAAATGA ACTGTATCAA 60
GGCAAGCTGA AGGACTACGT GAGATGTCTG GAATGTGGTT ATGAGGGCTG GAGAATCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00973--USP_2
PS50235--USP_3

Pfam

PF14560--Ubiquitin_2
PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002228	Ailuropoda melanoleuca	96.77	0.00e+00	1996.00
IUUC-Apl-003486	Anas platyrhynchos	91.14	0.00e+00	1879.00
IUUC-Aca-005061	Anolis carolinensis	88.48	0.00e+00	1888.00
IUUC-Ame-011206	Astyanax mexicanus	80.22	0.00e+00	1657.00
IUUC-Bta-012942	Bos taurus	97.97	0.00e+00	2048.00
IUUC-Cel-018600	Caenorhabditis elegans	31.84	1.00e-74	275.00
IUUC-Cja-018950	Callithrix jacchus	98.06	0.00e+00	2031.00
IUUC-Cfa-020299	Canis familiaris	98.62	0.00e+00	2040.00
IUUC-Cpo-021943	Cavia porcellus	97.14	0.00e+00	2014.00
IUUC-Csa-023285	Chlorocebus sabaeus	97.97	0.00e+00	2029.00
IUUC-Cho-025006	Choloepus hoffmanni	90.77	0.00e+00	1821.00
IUUC-Cin-025145	Ciona intestinalis	38.21	9.00e-160	557.00
IUUC-Csv-025839	Ciona savignyi	45.49	6.00e-114	405.00
IUUC-Dre-027959	Danio rerio	81.46	0.00e+00	1615.00
IUUC-Dno-030023	Dasypus novemcinctus	94.58	0.00e+00	1904.00
IUUC-Dor-030994	Dipodomys ordii	97.15	0.00e+00	962.00
IUUC-Dme-031604	Drosophila melanogaster	42.04	1.00e-89	325.00
IUUC-Ete-032596	Echinops telfairi	80.47	0.00e+00	1303.00
IUUC-Eca-033913	Equus caballus	97.88	0.00e+00	2045.00
IUUC-Eeu-034518	Erinaceus europaeus	88.38	0.00e+00	1779.00
IUUC-Fca-035997	Felis catus	98.34	0.00e+00	2032.00
IUUC-Fal-037088	Ficedula albicollis	90.51	0.00e+00	1859.00
IUUC-Gmo-038920	Gadus morhua	76.71	0.00e+00	1563.00
IUUC-Gga-040953	Gallus gallus	91.15	0.00e+00	1864.00
IUUC-Gac-042400	Gasterosteus aculeatus	79.45	0.00e+00	1610.00
IUUC-Ggo-044820	Gorilla gorilla	97.97	0.00e+00	2029.00
IUUC-Hsa-046634	Homo sapiens	97.88	0.00e+00	2025.00
IUUC-Lch-050440	Latimeria chalumnae	87.02	0.00e+00	1825.00
IUUC-Loc-051904	Lepisosteus oculatus	85.07	0.00e+00	1766.00
IUUC-Laf-053760	Loxodonta africana	96.50	0.00e+00	2045.00
IUUC-Mcc-054637	Macaca mulatta	97.97	0.00e+00	2028.00
IUUC-Meu-056904	Macropus eugenii	94.56	0.00e+00	1547.00
IUUC-Mga-059556	Meleagris gallopavo	90.41	0.00e+00	1852.00
IUUC-Mmr-061192	Microcebus murinus	98.15	0.00e+00	2034.00
IUUC-Mdo-061929	Monodelphis domestica	95.48	0.00e+00	1989.00
IUUC-Mmu-063726	Mus musculus	94.38	0.00e+00	1996.00
IUUC-Mpu-066014	Mustela putorius furo	98.43	0.00e+00	2036.00
IUUC-Mlu-067232	Myotis lucifugus	98.34	0.00e+00	2043.00
IUUC-Nle-069619	Nomascus leucogenys	97.79	0.00e+00	2024.00
IUUC-Opr-070224	Ochotona princeps	93.12	0.00e+00	1146.00
IUUC-Ont-071384	Oreochromis niloticus	81.16	0.00e+00	1650.00
IUUC-Oan-073208	Ornithorhynchus anatinus	89.70	0.00e+00	1905.00
IUUC-Ocu-074285	Oryctolagus cuniculus	97.97	0.00e+00	2031.00
IUUC-Ola-087051	Oryzias latipes	79.98	0.00e+00	1592.00
IUUC-Oga-088928	Otolemur garnettii	97.79	0.00e+00	2030.00
IUUC-Oar-090215	Ovis aries	98.99	0.00e+00	2072.00
IUUC-Ptr-091035	Pan troglodytes	97.79	0.00e+00	2024.00
IUUC-Pan-092377	Papio anubis	97.32	0.00e+00	2005.00
IUUC-Pfo-096722	Poecilia formosa	80.18	0.00e+00	1639.00
IUUC-Pab-098723	Pongo abelii	97.79	0.00e+00	2024.00
IUUC-Pca-100105	Procavia capensis	95.75	0.00e+00	1847.00
IUUC-Pva-102514	Pteropus vampyrus	89.63	0.00e+00	728.00
IUUC-Rno-105384	Rattus norvegicus	95.30	0.00e+00	1985.00
IUUC-Sha-106982	Sarcophilus harrisii	93.36	0.00e+00	2001.00
IUUC-Sar-113723	Sorex araneus	90.20	0.00e+00	862.00
IUUC-Tgu-116722	Taeniopygia guttata	90.33	0.00e+00	1860.00
IUUC-Tru-118380	Takifugu rubripes	77.99	0.00e+00	1631.00
IUUC-Tsy-119646	Tarsius syrichta	94.37	0.00e+00	1934.00
IUUC-Tni-120762	Tetraodon nigroviridis	78.14	0.00e+00	1641.00
IUUC-Tbe-127861	Tupaia belangeri	95.20	0.00e+00	1937.00
IUUC-Ttr-129254	Tursiops truncatus	98.21	0.00e+00	1131.00
IUUC-Vpa-130141	Vicugna pacos	92.52	0.00e+00	1150.00
IUUC-Xtr-132700	Xenopus tropicalis	82.30	0.00e+00	1748.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence