iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt++v++++  ++   ++sG+ D  ik+WDl +g l
   Q: 182  GHTGWVRAVDVePGnQWFASGGADRIIKIWDLASGQL 218
           8***********77799***************99876 PP

UBD/Beta-Prp

   S: 17   kfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdr 116
            ++p+ ++l+t  rd+t +vwd++t+  ++++ gh+++v++v +++ ++  +t+s D+t+++wdl +g  + tl+ h++sv++l+++p  + ++s+s d+
   Q: 275  SVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDN 374
           568889999*************************************999***************************************99*******665 PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvysls......fdsngkelvsgsldgtvklwd 208
            i+ w+l++g+ ++  lsgh++++n++++++ + ++vsG++++ + +Wd ++g++ ++  t+ + +s++s +      fd++g +l+++  d+t+k++ 
   Q: 375  -IKQWKLPKGEFMQ-NLSGHNAIINTLSSND-DGVVVSGADNGSLCFWDWRSGFCFQKIqTKPQPGSIESEAgiyascFDKTGLRLITAEADKTIKMYK 470
           .9***********9.************9998.7799*********************997555667777766788888******************995 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSASVSDPYE QMPAAPTDDD LEDKPEADKK ALLNQVFKSL KRAQDLFYHD YAQPPPMPEE 60
NDSLIRSMKR KHEYGNVIKK VEEMKVRREN EMLALPTSQP MHGTGSVIAS AGTPLAITDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTGTTTTA AAGAAACATG TCTGCAAGCG TTTCCGATCC GTATGAACAA ATGCCAGCTG 60
CTCCAACAGA TGATGATCTC GGTTTGTTGG TAGTTAAAAT AATTAAATAA TAAATTCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

cel:CELE_D1054.15

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	48.33	6.00e-124	436.00
IUUC-Aml-001605	Ailuropoda melanoleuca	53.19	3.00e-157	546.00
IUUC-Atr-002757	Amborella trichopoda	63.67	9.00e-123	432.00
IUUC-Apl-003198	Anas platyrhynchos	52.83	5.00e-157	546.00
IUUC-Aca-004683	Anolis carolinensis	52.22	4.00e-154	536.00
IUUC-Aly-005775	Arabidopsis lyrata	58.47	3.00e-129	453.00
IUUC-Ath-007460	Arabidopsis thaliana	58.20	1.00e-128	451.00
IUUC-Ago-007884	Ashbya gossypii	50.57	5.00e-106	376.00
IUUC-Acl-008153	Aspergillus clavatus	64.14	7.00e-132	462.00
IUUC-Afl-008384	Aspergillus flavus	55.99	3.00e-139	486.00
IUUC-Afu-009045	Aspergillus fumigatus	64.95	2.00e-131	461.00
IUUC-Ani-009229	Aspergillus nidulans	54.63	4.00e-134	469.00
IUUC-Ang-009812	Aspergillus niger	68.57	7.00e-128	448.00
IUUC-Aor-010059	Aspergillus oryzae	55.99	3.00e-139	486.00
IUUC-Ate-010351	Aspergillus terreus	55.31	2.00e-141	494.00
IUUC-Ame-011613	Astyanax mexicanus	47.04	1.00e-85	308.00
IUUC-Bgr-012042	Blumeria graminis	51.28	9.00e-139	485.00
IUUC-Bta-012406	Bos taurus	53.11	2.00e-157	547.00
IUUC-Bci-013760	Botrytis cinerea	50.92	1.00e-133	468.00
IUUC-Bdi-014776	Brachypodium distachyon	60.17	2.00e-126	444.00
IUUC-Bol-016189	Brassica oleracea	50.86	2.00e-132	464.00
IUUC-Bra-018044	Brassica rapa	50.86	4.00e-131	460.00
IUUC-Cja-019974	Callithrix jacchus	53.71	2.00e-156	544.00
IUUC-Cfa-021085	Canis familiaris	53.91	4.00e-157	546.00
IUUC-Cpo-021458	Cavia porcellus	53.52	1.00e-156	545.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	61.85	1.00e-121	428.00
IUUC-Csa-023883	Chlorocebus sabaeus	53.71	2.00e-156	543.00
IUUC-Cho-024623	Choloepus hoffmanni	52.94	7.00e-152	529.00
IUUC-Cin-025190	Ciona intestinalis	54.05	5.00e-154	536.00
IUUC-Csv-026367	Ciona savignyi	53.01	1.00e-151	528.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	65.17	6.00e-139	486.00
IUUC-Cne-027069	Cryptococcus neoformans	62.16	5.00e-125	439.00
IUUC-Cme-027233	Cyanidioschyzon merolae	31.82	4.00e-41	160.00
IUUC-Dre-028260	Danio rerio	54.42	2.00e-158	550.00
IUUC-Dno-029112	Dasypus novemcinctus	53.20	9.00e-157	545.00
IUUC-Dor-031118	Dipodomys ordii	67.33	1.00e-150	524.00
IUUC-Dse-031493	Dothistroma septosporum	50.94	4.00e-131	460.00
IUUC-Dme-032138	Drosophila melanogaster	56.40	4.00e-158	549.00
IUUC-Ete-032411	Echinops telfairi	47.99	6.00e-128	449.00
IUUC-Eca-033521	Equus caballus	53.52	3.00e-156	543.00
IUUC-Eeu-035249	Erinaceus europaeus	55.81	3.00e-123	433.00
IUUC-Fca-036358	Felis catus	53.52	5.00e-156	542.00
IUUC-Fal-036933	Ficedula albicollis	53.18	1.00e-158	551.00
IUUC-Fox-037713	Fusarium oxysporum	57.79	4.00e-139	486.00
IUUC-Fso-038380	Fusarium solani	63.82	2.00e-137	480.00
IUUC-Gmo-039133	Gadus morhua	52.11	2.00e-153	534.00
IUUC-Ggr-039915	Gaeumannomyces graminis	65.87	2.00e-130	457.00
IUUC-Gga-041176	Gallus gallus	69.68	2.00e-153	534.00
IUUC-Gac-042344	Gasterosteus aculeatus	53.42	5.00e-153	533.00
IUUC-Gma-043328	Glycine max	50.11	3.00e-126	443.00
IUUC-Ggo-044478	Gorilla gorilla	53.71	3.00e-156	543.00
IUUC-Hsa-046037	Homo sapiens	53.37	7.00e-157	545.00
IUUC-Hvu-047349	Hordeum vulgare	52.02	6.00e-128	449.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	53.89	3.00e-157	546.00
IUUC-Kpa-049343	Komagataella pastoris	56.92	3.00e-117	413.00
IUUC-Lch-049830	Latimeria chalumnae	53.23	3.00e-155	540.00
IUUC-Lpe-051442	Leersia perrieri	60.17	1.00e-126	445.00
IUUC-Loc-051794	Lepisosteus oculatus	53.91	3.00e-148	517.00
IUUC-Lma-053137	Leptosphaeria maculans	55.98	2.00e-122	431.00
IUUC-Laf-053471	Loxodonta africana	52.91	2.00e-156	544.00
IUUC-Mcc-055627	Macaca mulatta	53.18	2.00e-156	543.00
IUUC-Meu-056148	Macropus eugenii	53.53	1.00e-150	525.00
IUUC-Mor-056960	Magnaporthe oryzae	65.05	3.00e-136	477.00
IUUC-Mtr-057816	Medicago truncatula	50.00	2.00e-127	447.00
IUUC-Mla-059031	Melampsora laricipopulina	65.94	1.00e-127	447.00
IUUC-Mga-059337	Meleagris gallopavo	52.48	4.00e-154	536.00
IUUC-Mvi-060217	Microbotryum violaceum	65.00	2.00e-128	451.00
IUUC-Mmr-061018	Microcebus murinus	53.49	3.00e-156	543.00
IUUC-Mdo-062863	Monodelphis domestica	52.92	8.00e-153	532.00
IUUC-Mmu-063988	Mus musculus	53.89	7.00e-157	545.00
IUUC-Mac-064459	Musa acuminata	61.09	2.00e-118	417.00
IUUC-Mpu-066559	Mustela putorius furo	52.33	7.00e-154	535.00
IUUC-Mlu-067361	Myotis lucifugus	53.63	5.00e-157	546.00
IUUC-Nfi-068492	Neosartorya fischeri	53.61	5.00e-132	462.00
IUUC-Ncr-068808	Neurospora crassa	63.79	5.00e-137	479.00
IUUC-Nle-069875	Nomascus leucogenys	53.71	2.00e-156	543.00
IUUC-Opr-070462	Ochotona princeps	69.92	5.00e-118	416.00
IUUC-Ont-071365	Oreochromis niloticus	52.53	2.00e-152	531.00
IUUC-Oan-072708	Ornithorhynchus anatinus	53.18	4.00e-157	546.00
IUUC-Ocu-074594	Oryctolagus cuniculus	53.91	5.00e-158	549.00
IUUC-Oba-075570	Oryza barthii	60.17	3.00e-126	444.00
IUUC-Obr-076366	Oryza brachyantha	62.93	4.00e-91	326.00
IUUC-Ogl-077153	Oryza glaberrima	60.17	1.00e-125	441.00
IUUC-Ogu-078540	Oryza glumaepatula	60.17	3.00e-126	444.00
IUUC-Oin-079612	Oryza indica	59.31	2.00e-124	437.00
IUUC-Olo-081077	Oryza longistaminata	59.31	2.00e-124	437.00
IUUC-Ome-081236	Oryza meridionalis	60.90	9.00e-124	435.00
IUUC-Oni-082499	Oryza nivara	60.17	3.00e-126	444.00
IUUC-Opu-083499	Oryza punctata	59.31	3.00e-124	437.00
IUUC-Oru-084276	Oryza rufipogon	60.17	3.00e-126	444.00
IUUC-Osa-085849	Oryza sativa	60.17	3.00e-126	444.00
IUUC-Ola-086655	Oryzias latipes	53.44	3.00e-153	533.00
IUUC-Olu-087637	Ostreococcus lucimarinus	60.29	1.00e-124	437.00
IUUC-Oga-087934	Otolemur garnettii	53.38	1.00e-156	544.00
IUUC-Oar-090185	Ovis aries	53.01	1.00e-157	548.00
IUUC-Ptr-091198	Pan troglodytes	53.71	2.00e-156	543.00
IUUC-Pan-092622	Papio anubis	53.71	2.00e-156	543.00
IUUC-Psi-093320	Pelodiscus sinensis	69.10	5.00e-152	529.00
IUUC-Pma-094638	Petromyzon marinus	54.97	1.00e-158	551.00
IUUC-Pno-094826	Phaeosphaeria nodorum	50.58	5.00e-104	370.00
IUUC-Ppa-095576	Physcomitrella patens	64.31	1.00e-123	435.00
IUUC-Pfo-096894	Poecilia formosa	53.68	7.00e-154	535.00
IUUC-Pab-098020	Pongo abelii	53.71	2.00e-156	543.00
IUUC-Pop-099180	Populus trichocarpa	50.00	1.00e-124	438.00
IUUC-Pca-100909	Procavia capensis	71.80	1.00e-118	418.00
IUUC-Ppe-101346	Prunus persica	49.46	6.00e-127	446.00
IUUC-Pva-102167	Pteropus vampyrus	56.74	9.00e-124	435.00
IUUC-Pgr-103516	Puccinia graminis	64.69	3.00e-127	447.00
IUUC-Ptt-103738	Puccinia triticina	64.69	2.00e-126	444.00
IUUC-Pte-104352	Pyrenophora teres	56.73	3.00e-126	444.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	57.02	2.00e-126	444.00
IUUC-Rno-105291	Rattus norvegicus	53.03	2.00e-155	541.00
IUUC-Sce-106204	Saccharomyces cerevisiae	51.81	7.00e-105	372.00
IUUC-Sha-106943	Sarcophilus harrisii	52.04	3.00e-149	520.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	67.41	3.00e-130	457.00
IUUC-Spo-108049	Schizosaccharomyces pombe	51.78	3.00e-134	470.00
IUUC-Smo-109043	Selaginella moellendorffii	61.52	1.00e-126	444.00
IUUC-Sit-110431	Setaria italica	52.76	6.00e-127	446.00
IUUC-Sly-111391	Solanum lycopersicum	50.23	1.00e-118	418.00
IUUC-Stu-112364	Solanum tuberosum	56.58	7.00e-99	352.00
IUUC-Sar-113450	Sorex araneus	68.30	6.00e-151	526.00
IUUC-Sbi-113829	Sorghum bicolor	60.17	5.00e-127	446.00
IUUC-Sre-115153	Sporisorium reilianum	61.56	1.00e-115	408.00
IUUC-Ssc-115798	Sus scrofa	52.09	5.00e-156	542.00
IUUC-Tgu-117417	Taeniopygia guttata	52.16	2.00e-157	547.00
IUUC-Tru-117615	Takifugu rubripes	52.28	1.00e-145	508.00
IUUC-Tsy-119480	Tarsius syrichta	53.80	2.00e-156	544.00
IUUC-Tni-119847	Tetraodon nigroviridis	52.24	2.00e-153	534.00
IUUC-Tca-121287	Theobroma cacao	50.64	1.00e-127	448.00
IUUC-Tre-122010	Trichoderma reesei	64.22	2.00e-139	488.00
IUUC-Tvi-122475	Trichoderma virens	65.47	2.00e-139	487.00
IUUC-Tae-124397	Triticum aestivum	51.65	1.00e-128	452.00
IUUC-Tur-126116	Triticum urartu	50.29	5.00e-95	340.00
IUUC-Tme-126992	Tuber melanosporum	64.35	3.00e-135	473.00
IUUC-Tbe-127803	Tupaia belangeri	72.94	5.00e-116	409.00
IUUC-Ttr-128933	Tursiops truncatus	53.73	3.00e-156	543.00
IUUC-Uma-129447	Ustilago maydis	60.26	3.00e-113	400.00
IUUC-Vda-129780	Verticillium dahliae	63.66	2.00e-138	484.00
IUUC-Vpa-130557	Vicugna pacos	46.27	1.00e-54	206.00
IUUC-Vvi-130918	Vitis vinifera	59.16	2.00e-117	414.00
IUUC-Xtr-132409	Xenopus tropicalis	52.46	2.00e-155	541.00
IUUC-Xma-133420	Xiphophorus maculatus	53.91	2.00e-156	544.00
IUUC-Yli-134362	Yarrowia lipolytica	62.77	4.00e-126	443.00
IUUC-Zma-135804	Zea mays	55.24	2.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence