iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114745

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G020700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g001920	Sb02g001920.1	Sb02g001920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-28	96.3	223	252
UBD/Beta-Prp	2.90e-42	145.7	10	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH++ v++++  s++l++sGs D ++k+W 
   Q: 223  GHSSLVYSVDAhSSGLIASGSEDRSLKIWK 252
           8********98766***************6 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk.....ilvtgseDrtikvwdlstgkcvhtl 90
           l gh ++v   +++  ++  +at+srd+t+k w   ++k       ++l gh+++v  + ++p ++      +v+g+ D ++ +wdl++g+ v t+
   Q: 10   LHGHADDVRG-ICV-CGDAGIATSSRDRTVKFWTRNPEKEseyvlSKTLAGHSSFVGPLAWIPPSDrfpegGIVSGGMDTFVFLWDLQKGEVVETM 103
           5666666666.666.46677**************9999999999999***************9999888889************************ PP
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysl 186
           kgh+++v+ l+++ +   ++s s d t+r w  ++g+ +e + + h+ +v++v   p+g l ++Gs D+t++lW+    ++l+t++g h d v++l
   Q: 104  KGHNSQVTGLAVDTN-GDIISSSMDCTVRRW--RNGSAIE-VWEAHKVAVQTVLKLPTGEL-FTGSSDSTIKLWKG--RTCLQTFSG-HADTVRCL 191
           *************95.5699***********..9*****9.99999999999999997775.6***********66..99******9.******** PP
   S: 187  sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvl 282
           +  + g  ++s+s+d+t+klw l tg+ +  ++gh++ v+sv+++  + +++sgs+D+s++iW  + g ++++++++   ++  ++  +g+  +v+
   Q: 192  ASMP-GLGILSASHDSTIKLWAL-TGQPLLDMIGHSSLVYSVDAH-SSGLIASGSEDRSLKIW--KDGVCIQSIEHPG-CIWDAKF--LGNGDIVT 279
           ****.68****************.999******************.99***************..89********987.9******..99****** PP
   S: 283  gsedskvniwklkknep 299
           + +d++ +iw  +++++
   Q: 280  ACSDGTTRIWTADSSRF 296
           ***********998876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEYRLGLQL HGHADDVRGI CVCGDAGIAT SSRDRTVKFW TRNPEKESEY VLSKTLAGHS 60
SFVGPLAWIP PSDRFPEGGI VSGGMDTFVF LWDLQKGEVV ETMKGHNSQV TGLAVDTNGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGT ACCGCCTCGG ACTGCAGCTG CACGGCCACG CCGACGACGT AAGCCGCCGC 60
TCCCCTCTCC CCCTTCCCTT CCCTTCCCTT CCCTTCCCCG GTACACTCTC GCCACCGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

sbi:SORBI_02g001920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	81.77	0.00e+00	1174.00
IUUC-Aml-002125	Ailuropoda melanoleuca	32.76	3.00e-101	362.00
IUUC-Atr-002554	Amborella trichopoda	60.99	0.00e+00	865.00
IUUC-Apl-004094	Anas platyrhynchos	33.58	5.00e-92	331.00
IUUC-Aca-004726	Anolis carolinensis	33.15	2.00e-97	349.00
IUUC-Aly-005961	Arabidopsis lyrata	60.51	0.00e+00	918.00
IUUC-Ath-006639	Arabidopsis thaliana	60.11	0.00e+00	904.00
IUUC-Ago-007772	Ashbya gossypii	27.74	2.00e-62	233.00
IUUC-Acl-008316	Aspergillus clavatus	31.06	5.00e-71	261.00
IUUC-Afl-008532	Aspergillus flavus	29.86	2.00e-74	273.00
IUUC-Afu-008950	Aspergillus fumigatus	30.44	1.00e-78	286.00
IUUC-Ani-009186	Aspergillus nidulans	31.20	4.00e-85	308.00
IUUC-Ang-009575	Aspergillus niger	30.27	1.00e-72	266.00
IUUC-Aor-010086	Aspergillus oryzae	29.86	2.00e-74	273.00
IUUC-Ate-010541	Aspergillus terreus	29.21	1.00e-78	286.00
IUUC-Ame-011633	Astyanax mexicanus	32.17	4.00e-102	365.00
IUUC-Bgr-012292	Blumeria graminis	28.11	4.00e-73	268.00
IUUC-Bta-013218	Bos taurus	32.80	1.00e-102	366.00
IUUC-Bci-013876	Botrytis cinerea	32.74	2.00e-92	332.00
IUUC-Bdi-014810	Brachypodium distachyon	83.29	0.00e+00	1248.00
IUUC-Bol-016006	Brassica oleracea	59.31	0.00e+00	905.00
IUUC-Bra-017593	Brassica rapa	59.57	0.00e+00	910.00
IUUC-Cel-018703	Caenorhabditis elegans	23.13	1.00e-32	134.00
IUUC-Cja-019270	Callithrix jacchus	32.36	1.00e-100	359.00
IUUC-Cfa-021262	Canis familiaris	33.03	1.00e-101	363.00
IUUC-Cpo-021449	Cavia porcellus	32.72	1.00e-90	326.00
IUUC-Csa-024140	Chlorocebus sabaeus	32.89	6.00e-101	361.00
IUUC-Cho-024923	Choloepus hoffmanni	36.05	3.00e-38	152.00
IUUC-Cin-025373	Ciona intestinalis	31.31	3.00e-85	308.00
IUUC-Csv-026324	Ciona savignyi	30.97	1.00e-81	296.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	27.98	3.00e-67	249.00
IUUC-Cne-026998	Cryptococcus neoformans	31.82	2.00e-52	199.00
IUUC-Cme-027154	Cyanidioschyzon merolae	28.47	2.00e-54	206.00
IUUC-Dre-028674	Danio rerio	32.17	4.00e-101	361.00
IUUC-Dno-028966	Dasypus novemcinctus	32.85	3.00e-101	362.00
IUUC-Dor-030343	Dipodomys ordii	29.91	7.00e-46	177.00
IUUC-Dse-031385	Dothistroma septosporum	28.09	2.00e-71	263.00
IUUC-Dme-032044	Drosophila melanogaster	30.21	3.00e-75	275.00
IUUC-Ete-032506	Echinops telfairi	28.21	2.00e-41	163.00
IUUC-Eca-033547	Equus caballus	32.54	4.00e-102	364.00
IUUC-Eeu-034462	Erinaceus europaeus	36.91	4.00e-39	155.00
IUUC-Fca-035893	Felis catus	32.89	1.00e-101	363.00
IUUC-Fal-037235	Ficedula albicollis	32.84	7.00e-99	354.00
IUUC-Fox-037836	Fusarium oxysporum	28.89	3.00e-73	269.00
IUUC-Fso-038251	Fusarium solani	30.36	1.00e-70	260.00
IUUC-Gmo-038648	Gadus morhua	32.77	2.00e-96	345.00
IUUC-Ggr-039867	Gaeumannomyces graminis	28.38	9.00e-78	284.00
IUUC-Gga-040989	Gallus gallus	33.74	7.00e-104	370.00
IUUC-Gac-041344	Gasterosteus aculeatus	32.16	7.00e-94	337.00
IUUC-Gma-042720	Glycine max	61.44	0.00e+00	956.00
IUUC-Ggo-045009	Gorilla gorilla	35.80	8.00e-89	320.00
IUUC-Hsa-046807	Homo sapiens	32.89	9.00e-101	360.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	32.67	5.00e-103	368.00
IUUC-Kpa-049134	Komagataella pastoris	29.68	4.00e-71	261.00
IUUC-Lch-049597	Latimeria chalumnae	36.25	3.00e-71	261.00
IUUC-Lpe-050821	Leersia perrieri	78.84	0.00e+00	1192.00
IUUC-Loc-051849	Lepisosteus oculatus	32.66	1.00e-96	346.00
IUUC-Lma-053297	Leptosphaeria maculans	31.98	1.00e-82	300.00
IUUC-Laf-053495	Loxodonta africana	32.54	1.00e-100	360.00
IUUC-Meu-055983	Macropus eugenii	37.61	1.00e-34	140.00
IUUC-Mor-057006	Magnaporthe oryzae	28.09	1.00e-71	263.00
IUUC-Mpo-057465	Magnaporthe poae	28.59	1.00e-75	276.00
IUUC-Mtr-058374	Medicago truncatula	61.67	0.00e+00	968.00
IUUC-Mla-058895	Melampsora laricipopulina	33.70	1.00e-60	226.00
IUUC-Mvi-060297	Microbotryum violaceum	31.79	4.00e-84	305.00
IUUC-Mmr-060810	Microcebus murinus	31.22	3.00e-88	318.00
IUUC-Mdo-062671	Monodelphis domestica	32.50	2.00e-99	356.00
IUUC-Mmu-063536	Mus musculus	33.24	7.00e-100	357.00
IUUC-Mac-064902	Musa acuminata	69.03	0.00e+00	1027.00
IUUC-Mpu-066085	Mustela putorius furo	32.63	1.00e-101	363.00
IUUC-Mlu-067907	Myotis lucifugus	37.23	1.00e-85	309.00
IUUC-Nfi-068457	Neosartorya fischeri	30.92	6.00e-61	228.00
IUUC-Ncr-068622	Neurospora crassa	30.24	4.00e-73	268.00
IUUC-Nle-069049	Nomascus leucogenys	32.36	4.00e-97	348.00
IUUC-Opr-071013	Ochotona princeps	34.78	7.00e-26	111.00
IUUC-Ont-071339	Oreochromis niloticus	32.17	6.00e-101	361.00
IUUC-Oan-073353	Ornithorhynchus anatinus	40.35	5.00e-39	153.00
IUUC-Ocu-074625	Oryctolagus cuniculus	32.98	6.00e-104	370.00
IUUC-Oba-075226	Oryza barthii	75.20	0.00e+00	1095.00
IUUC-Obr-076875	Oryza brachyantha	80.29	0.00e+00	1242.00
IUUC-Ogl-077057	Oryza glaberrima	81.88	0.00e+00	1237.00
IUUC-Ogu-078156	Oryza glumaepatula	82.01	0.00e+00	1235.00
IUUC-Oin-079373	Oryza indica	81.75	0.00e+00	1234.00
IUUC-Olo-080849	Oryza longistaminata	66.33	0.00e+00	827.00
IUUC-Ome-081654	Oryza meridionalis	75.20	0.00e+00	1092.00
IUUC-Oni-082221	Oryza nivara	74.60	0.00e+00	1090.00
IUUC-Opu-084103	Oryza punctata	74.47	0.00e+00	1060.00
IUUC-Oru-084751	Oryza rufipogon	74.93	0.00e+00	1089.00
IUUC-Osa-085584	Oryza sativa	81.88	0.00e+00	1234.00
IUUC-Ola-086974	Oryzias latipes	31.85	5.00e-100	358.00
IUUC-Oga-088052	Otolemur garnettii	30.85	3.00e-90	325.00
IUUC-Oar-089509	Ovis aries	32.24	4.00e-100	358.00
IUUC-Ptr-090911	Pan troglodytes	32.76	2.00e-100	358.00
IUUC-Pan-092141	Papio anubis	32.76	3.00e-100	358.00
IUUC-Psi-093543	Pelodiscus sinensis	32.09	6.00e-91	327.00
IUUC-Pno-094952	Phaeosphaeria nodorum	30.19	3.00e-76	278.00
IUUC-Ppa-095881	Physcomitrella patens	54.42	0.00e+00	788.00
IUUC-Pfo-096739	Poecilia formosa	31.38	2.00e-95	342.00
IUUC-Pab-098641	Pongo abelii	32.62	2.00e-101	363.00
IUUC-Pop-099621	Populus trichocarpa	63.25	0.00e+00	933.00
IUUC-Pca-100599	Procavia capensis	30.03	1.00e-79	290.00
IUUC-Ppe-101874	Prunus persica	63.03	0.00e+00	957.00
IUUC-Pva-103009	Pteropus vampyrus	32.31	2.00e-78	286.00
IUUC-Pgr-103260	Puccinia graminis	32.34	1.00e-78	286.00
IUUC-Ptt-103711	Puccinia triticina	30.00	6.00e-67	248.00
IUUC-Pte-104337	Pyrenophora teres	32.47	2.00e-79	290.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	32.47	1.00e-79	290.00
IUUC-Rno-105273	Rattus norvegicus	33.24	1.00e-103	370.00
IUUC-Sce-106351	Saccharomyces cerevisiae	35.75	1.00e-54	207.00
IUUC-Sha-106758	Sarcophilus harrisii	32.36	4.00e-97	348.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	30.43	3.00e-80	292.00
IUUC-Spo-108093	Schizosaccharomyces pombe	31.27	1.00e-90	327.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	31.22	9.00e-86	310.00
IUUC-Smo-109368	Selaginella moellendorffii	49.87	0.00e+00	710.00
IUUC-Sit-109699	Setaria italica	91.13	0.00e+00	1381.00
IUUC-Sly-111063	Solanum lycopersicum	60.16	0.00e+00	921.00
IUUC-Sar-113199	Sorex araneus	37.97	3.00e-70	259.00
IUUC-Sre-115080	Sporisorium reilianum	36.06	7.00e-75	274.00
IUUC-Ssc-115666	Sus scrofa	32.23	3.00e-100	358.00
IUUC-Tgu-116877	Taeniopygia guttata	32.43	6.00e-98	351.00
IUUC-Tru-117580	Takifugu rubripes	32.15	1.00e-98	353.00
IUUC-Tsy-118946	Tarsius syrichta	33.48	2.00e-95	342.00
IUUC-Tni-119755	Tetraodon nigroviridis	31.16	3.00e-95	342.00
IUUC-Tca-120977	Theobroma cacao	60.20	0.00e+00	946.00
IUUC-Tre-122217	Trichoderma reesei	30.80	7.00e-79	287.00
IUUC-Tvi-122671	Trichoderma virens	29.35	7.00e-73	267.00
IUUC-Tae-125266	Triticum aestivum	82.49	0.00e+00	1271.00
IUUC-Tur-126404	Triticum urartu	50.93	2.00e-96	345.00
IUUC-Tme-126971	Tuber melanosporum	32.82	1.00e-95	343.00
IUUC-Tbe-127858	Tupaia belangeri	36.41	2.00e-27	117.00
IUUC-Ttr-128173	Tursiops truncatus	32.93	3.00e-103	368.00
IUUC-Uma-129322	Ustilago maydis	28.50	4.00e-77	281.00
IUUC-Vda-129682	Verticillium dahliae	31.01	9.00e-81	293.00
IUUC-Vpa-130607	Vicugna pacos	32.57	3.00e-95	342.00
IUUC-Vvi-131153	Vitis vinifera	62.95	0.00e+00	967.00
IUUC-Xtr-132208	Xenopus tropicalis	32.61	8.00e-101	360.00
IUUC-Xma-133098	Xiphophorus maculatus	31.84	1.00e-98	353.00
IUUC-Yli-134646	Yarrowia lipolytica	33.47	3.00e-66	245.00
IUUC-Zma-135920	Zea mays	84.79	0.00e+00	1336.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence