iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sar-113004

Ensembl Protein ID

ENSSARP00000009798.1

UniProt Accession

B3EX46; B3EX46_SORAR

Genbank Protein ID

ACE75804.1

Protein Name

WD repeat protein (Predicted)

Genbank Nucleotide ID

DP000766

Gene Name

BRWD3; WDR9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSARG00000010796.1	ENSSART00000010848.1	ENSSARP00000009798.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-30	102.5	176	213
UBD/Beta-Prp	1.20e-63	214.5	177	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH +sv+c+af  s++++ +GsdD+ +k+W +++g+ll
   Q: 176  GHLSSVYCVAFdrSGRRIFTGSDDCLVKIWATDDGRLL 213
           8**********96669******************9987 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           h s ++cv+f ++++ ++tgs+d  +k+w +++g ll++l gh+ae++++  + +  +++ gs D++++vw l+t+ +v +l+gh++s+
   Q: 177  HLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASI 265
           5567889************************************************99******************************** PP
   S: 98   lslsfsp....sgdklvsGshdrtirvwdletgqclee......tlsghdgv.vncvvvhpdgnllvsGslDrtvrlWdl..ktgkllr 173
           +s++f+p    ++ +l s+++d ti  w+++ ++          t++ + gv ++c ++++ g  + +Gs+D ++r++ l  +  + + 
   Q: 266  TSIQFCPstkgTTRYLTSTGADGTICFWQWHVKTMKFRdrpvkfTERSRPGVqISCSSFSSGGMFITTGSTDHVIRIYYLgsEIPEKIA 354
           *******9988889*************9999888765569*99988888887356777777669999************9778889999 PP
   S: 174  tltgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtg 212
           +l++ htd+v  ++f  ng   ++vsgs+dgt ++w++q++
   Q: 355  ELES-HTDKVVAVQFCNNGdsLRFVSGSRDGTARIWQYQQQ 394
           9999.*********9999977899**************975 PP

Organism

Sorex araneus

Protein Sequence
(Fasta)

MAAAPTQIEA ELYYLIARFL QSGPCNKSAQ VLVQELEEHQ LIPRRLDWEG KEHRRSFEDL 60
VAANAHIPPD YLLKICERIG PLDKEIPQSG SGVHTLGVGR QSLLRDAKDC KSTLWNGSAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG CACCTACCCA GATCGAAGCT GGTGGGTAGC CGTGTCGGGA GTGGAAGGGG 60
AGAGGGGGCT CCGGGAGGTT GTCAGTTTCT TTGGCAATTT TTTTTTTCTT TTCGATGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001113	Aegilops tauschii	30.07	4.00e-55	210.00
IUUC-Aml-001881	Ailuropoda melanoleuca	84.97	0.00e+00	1639.00
IUUC-Atr-002600	Amborella trichopoda	28.18	5.00e-56	213.00
IUUC-Apl-004016	Anas platyrhynchos	67.50	0.00e+00	1098.00
IUUC-Aly-006406	Arabidopsis lyrata	32.95	1.00e-53	205.00
IUUC-Ath-006801	Arabidopsis thaliana	32.95	7.00e-54	206.00
IUUC-Ame-010602	Astyanax mexicanus	77.35	0.00e+00	827.00
IUUC-Bta-013198	Bos taurus	84.21	0.00e+00	1637.00
IUUC-Bdi-014797	Brachypodium distachyon	29.25	8.00e-49	189.00
IUUC-Bol-015737	Brassica oleracea	32.04	3.00e-57	217.00
IUUC-Bra-017961	Brassica rapa	31.74	8.00e-57	215.00
IUUC-Cfa-020963	Canis familiaris	85.23	0.00e+00	1630.00
IUUC-Cpo-022448	Cavia porcellus	78.12	0.00e+00	1505.00
IUUC-Cre-023003	Chlamydomonas reinhardtii	33.57	2.00e-32	134.00
IUUC-Csa-023166	Chlorocebus sabaeus	82.74	0.00e+00	1474.00
IUUC-Csv-025813	Ciona savignyi	44.57	1.00e-139	489.00
IUUC-Dre-028508	Danio rerio	74.55	0.00e+00	871.00
IUUC-Dno-030070	Dasypus novemcinctus	82.44	0.00e+00	1613.00
IUUC-Dor-031052	Dipodomys ordii	73.84	0.00e+00	1142.00
IUUC-Dme-031752	Drosophila melanogaster	46.91	1.00e-154	541.00
IUUC-Ete-032650	Echinops telfairi	82.18	0.00e+00	895.00
IUUC-Eca-033953	Equus caballus	85.48	0.00e+00	1636.00
IUUC-Eeu-034871	Erinaceus europaeus	86.00	0.00e+00	862.00
IUUC-Fca-036099	Felis catus	84.47	0.00e+00	1644.00
IUUC-Fal-037246	Ficedula albicollis	66.86	0.00e+00	1162.00
IUUC-Gmo-039116	Gadus morhua	76.70	1.00e-136	481.00
IUUC-Gga-041097	Gallus gallus	68.87	0.00e+00	1196.00
IUUC-Gac-042435	Gasterosteus aculeatus	72.64	0.00e+00	815.00
IUUC-Gma-043340	Glycine max	28.46	3.00e-52	201.00
IUUC-Hsa-045666	Homo sapiens	82.74	0.00e+00	1474.00
IUUC-Hvu-047706	Hordeum vulgare	30.79	3.00e-32	132.00
IUUC-Lpe-051619	Leersia perrieri	29.30	5.00e-56	213.00
IUUC-Laf-053942	Loxodonta africana	82.24	0.00e+00	1487.00
IUUC-Mcc-054645	Macaca mulatta	82.93	0.00e+00	1479.00
IUUC-Meu-056321	Macropus eugenii	86.71	0.00e+00	926.00
IUUC-Mtr-058094	Medicago truncatula	29.82	5.00e-58	220.00
IUUC-Mga-060063	Meleagris gallopavo	69.21	0.00e+00	1192.00
IUUC-Mmr-061262	Microcebus murinus	83.51	0.00e+00	1488.00
IUUC-Mdo-062320	Monodelphis domestica	63.89	0.00e+00	1098.00
IUUC-Mmu-063163	Mus musculus	82.43	0.00e+00	1551.00
IUUC-Mac-065343	Musa acuminata	28.73	8.00e-59	222.00
IUUC-Mpu-066628	Mustela putorius furo	84.72	0.00e+00	1627.00
IUUC-Mlu-068082	Myotis lucifugus	83.30	0.00e+00	1473.00
IUUC-Nle-069609	Nomascus leucogenys	83.03	0.00e+00	1506.00
IUUC-Opr-070971	Ochotona princeps	63.78	2.00e-124	440.00
IUUC-Ont-071589	Oreochromis niloticus	73.39	0.00e+00	794.00
IUUC-Ocu-074122	Oryctolagus cuniculus	80.11	0.00e+00	1362.00
IUUC-Oba-075709	Oryza barthii	28.15	3.00e-50	194.00
IUUC-Obr-076619	Oryza brachyantha	28.85	4.00e-57	216.00
IUUC-Oin-079669	Oryza indica	30.26	4.00e-41	162.00
IUUC-Olo-080755	Oryza longistaminata	30.28	2.00e-41	164.00
IUUC-Opu-083233	Oryza punctata	28.62	3.00e-51	197.00
IUUC-Oru-085195	Oryza rufipogon	28.15	2.00e-50	194.00
IUUC-Ola-086580	Oryzias latipes	73.38	0.00e+00	844.00
IUUC-Olu-087745	Ostreococcus lucimarinus	27.04	6.00e-49	189.00
IUUC-Oga-089053	Otolemur garnettii	82.77	0.00e+00	1598.00
IUUC-Oar-090042	Ovis aries	84.55	0.00e+00	1655.00
IUUC-Ptr-091268	Pan troglodytes	82.93	0.00e+00	1477.00
IUUC-Pan-092376	Papio anubis	83.03	0.00e+00	1481.00
IUUC-Psi-093408	Pelodiscus sinensis	67.97	0.00e+00	1238.00
IUUC-Pma-094427	Petromyzon marinus	64.06	1.00e-125	441.00
IUUC-Ppa-095793	Physcomitrella patens	28.50	2.00e-67	251.00
IUUC-Pfo-096515	Poecilia formosa	73.03	0.00e+00	810.00
IUUC-Pab-097672	Pongo abelii	82.84	0.00e+00	1491.00
IUUC-Pop-099803	Populus trichocarpa	30.57	2.00e-65	243.00
IUUC-Ppe-101849	Prunus persica	29.25	2.00e-60	228.00
IUUC-Pva-102512	Pteropus vampyrus	98.00	0.00e+00	1107.00
IUUC-Rno-105797	Rattus norvegicus	81.06	0.00e+00	1442.00
IUUC-Sha-107061	Sarcophilus harrisii	61.90	0.00e+00	1069.00
IUUC-Sit-110017	Setaria italica	28.14	3.00e-47	184.00
IUUC-Sly-111859	Solanum lycopersicum	30.03	1.00e-64	240.00
IUUC-Sbi-114195	Sorghum bicolor	29.72	1.00e-55	210.00
IUUC-Tgu-117254	Taeniopygia guttata	66.94	0.00e+00	1156.00
IUUC-Tru-118186	Takifugu rubripes	73.13	0.00e+00	800.00
IUUC-Tsy-119003	Tarsius syrichta	79.85	0.00e+00	1376.00
IUUC-Tca-121615	Theobroma cacao	29.38	5.00e-53	203.00
IUUC-Tae-125478	Triticum aestivum	30.55	5.00e-61	229.00
IUUC-Tur-126809	Triticum urartu	30.55	5.00e-61	229.00
IUUC-Tbe-127813	Tupaia belangeri	69.63	0.00e+00	670.00
IUUC-Ttr-129265	Tursiops truncatus	81.08	0.00e+00	1425.00
IUUC-Vpa-130736	Vicugna pacos	79.67	0.00e+00	1331.00
IUUC-Vvi-131362	Vitis vinifera	28.55	1.00e-59	225.00
IUUC-Xma-134159	Xiphophorus maculatus	73.08	0.00e+00	772.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence