iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091603

Ensembl Protein ID

ENSPTRP00000020251.5

UniProt Accession

H2QHP5; H2QHP5_PANTR

Genbank Protein ID

JAA30465.1; JAA43193.1

Protein Name

WD repeat domain 43

Genbank Nucleotide ID

AACZ03013983; GABE01001546

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000011792.5	ENSPTRT00000021949.5	ENSPTRP00000020251.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-16	60.3	124	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v+c+++ +d + l s+sdD+ i  W++ t+++
   Q: 124  GHDNRVNCIQWhQDsGCLYSCSDDKHIVEWNVQTCKV 160
           8***********7789***********9999988776 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MAAGGGGSCD PLAPAGVPCA FSPHSQAYFA LASTDGHLRV WETANNRLHQ EYVPSAHLSG 60
TCTCLAWAPA RLQAKESPQR KKRKSEAVGM SNQTDLLALG TAVGSILLYS TVKGELHSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACACGTGG CTGCAGCGGG GCCAGAGCAG CAATGGCGGC GGGCGGCGGC GGTAGCTGCG 60
ACCCCCTGGC CCCGGCTGGG GTCCCTTGCG CCTTCTCCCC GCACAGCCAG GCCTACTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

KEGG

ptr:459122

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	93.23	0.00e+00	1110.00
IUUC-Atr-002533	Amborella trichopoda	20.42	3.00e-24	106.00
IUUC-Apl-003242	Anas platyrhynchos	73.81	0.00e+00	798.00
IUUC-Aca-004607	Anolis carolinensis	72.27	0.00e+00	871.00
IUUC-Aly-006074	Arabidopsis lyrata	25.80	2.00e-16	80.90
IUUC-Ath-007222	Arabidopsis thaliana	25.80	4.00e-16	79.70
IUUC-Ame-011014	Astyanax mexicanus	54.10	2.00e-172	599.00
IUUC-Bta-012605	Bos taurus	92.50	0.00e+00	1117.00
IUUC-Bdi-014072	Brachypodium distachyon	21.26	3.00e-20	93.60
IUUC-Bol-016255	Brassica oleracea	23.04	1.00e-23	105.00
IUUC-Bra-016850	Brassica rapa	27.27	6.00e-24	105.00
IUUC-Cja-019620	Callithrix jacchus	98.16	0.00e+00	1187.00
IUUC-Cfa-020520	Canis familiaris	92.67	0.00e+00	1120.00
IUUC-Cpo-022456	Cavia porcellus	85.59	0.00e+00	1095.00
IUUC-Cho-024726	Choloepus hoffmanni	88.02	0.00e+00	1084.00
IUUC-Cin-025761	Ciona intestinalis	35.84	4.00e-97	348.00
IUUC-Dre-028051	Danio rerio	53.15	1.00e-180	625.00
IUUC-Dno-030031	Dasypus novemcinctus	90.69	0.00e+00	1130.00
IUUC-Dme-031653	Drosophila melanogaster	26.53	9.00e-47	181.00
IUUC-Ete-032863	Echinops telfairi	80.38	3.00e-91	329.00
IUUC-Eca-033243	Equus caballus	93.01	0.00e+00	954.00
IUUC-Eeu-034970	Erinaceus europaeus	87.67	0.00e+00	794.00
IUUC-Fca-036009	Felis catus	92.55	0.00e+00	1105.00
IUUC-Fal-037264	Ficedula albicollis	72.24	0.00e+00	776.00
IUUC-Gmo-039124	Gadus morhua	56.18	6.00e-180	624.00
IUUC-Gga-040862	Gallus gallus	72.53	0.00e+00	856.00
IUUC-Gac-041468	Gasterosteus aculeatus	56.01	0.00e+00	646.00
IUUC-Gma-042795	Glycine max	21.05	2.00e-14	73.90
IUUC-Ggo-044432	Gorilla gorilla	99.33	0.00e+00	1203.00
IUUC-Hsa-047036	Homo sapiens	99.70	0.00e+00	1233.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	93.82	0.00e+00	1127.00
IUUC-Lch-049553	Latimeria chalumnae	62.29	0.00e+00	764.00
IUUC-Laf-053462	Loxodonta africana	91.00	0.00e+00	1133.00
IUUC-Mcc-055239	Macaca mulatta	98.50	0.00e+00	1188.00
IUUC-Mtr-057977	Medicago truncatula	22.45	2.00e-19	90.90
IUUC-Mga-060079	Meleagris gallopavo	73.62	0.00e+00	783.00
IUUC-Mmr-061472	Microcebus murinus	94.33	0.00e+00	1134.00
IUUC-Mdo-061972	Monodelphis domestica	78.22	0.00e+00	1027.00
IUUC-Mmu-063354	Mus musculus	88.15	0.00e+00	1058.00
IUUC-Mac-065064	Musa acuminata	23.64	4.00e-17	82.40
IUUC-Mpu-066877	Mustela putorius furo	91.83	0.00e+00	1115.00
IUUC-Mlu-067476	Myotis lucifugus	89.82	0.00e+00	1082.00
IUUC-Nle-069119	Nomascus leucogenys	99.00	0.00e+00	1198.00
IUUC-Ont-072093	Oreochromis niloticus	55.63	0.00e+00	685.00
IUUC-Oan-072944	Ornithorhynchus anatinus	73.15	0.00e+00	861.00
IUUC-Ocu-074472	Oryctolagus cuniculus	93.99	0.00e+00	1097.00
IUUC-Oba-075009	Oryza barthii	21.82	7.00e-18	85.50
IUUC-Ogl-077189	Oryza glaberrima	21.03	2.00e-17	84.00
IUUC-Oin-079064	Oryza indica	21.91	2.00e-17	84.30
IUUC-Opu-083604	Oryza punctata	21.64	2.00e-15	77.40
IUUC-Oru-084620	Oryza rufipogon	21.91	1.00e-17	84.30
IUUC-Osa-085345	Oryza sativa	21.91	9.00e-18	85.10
IUUC-Ola-086626	Oryzias latipes	54.24	0.00e+00	666.00
IUUC-Oga-087911	Otolemur garnettii	93.92	0.00e+00	1120.00
IUUC-Pan-092569	Papio anubis	98.50	0.00e+00	1188.00
IUUC-Pma-094287	Petromyzon marinus	53.62	0.00e+00	644.00
IUUC-Ppa-095327	Physcomitrella patens	27.58	1.00e-27	117.00
IUUC-Pfo-097292	Poecilia formosa	55.01	0.00e+00	640.00
IUUC-Pab-097878	Pongo abelii	99.49	0.00e+00	1183.00
IUUC-Pop-099418	Populus trichocarpa	22.52	1.00e-19	91.30
IUUC-Pca-100941	Procavia capensis	84.62	0.00e+00	990.00
IUUC-Ppe-101779	Prunus persica	20.52	7.00e-21	95.50
IUUC-Pva-102493	Pteropus vampyrus	84.99	0.00e+00	1016.00
IUUC-Rno-105084	Rattus norvegicus	88.98	0.00e+00	1062.00
IUUC-Sha-107486	Sarcophilus harrisii	81.03	0.00e+00	999.00
IUUC-Smo-108825	Selaginella moellendorffii	22.67	3.00e-21	97.10
IUUC-Sit-110825	Setaria italica	22.59	1.00e-21	98.20
IUUC-Sly-111365	Solanum lycopersicum	23.36	1.00e-22	101.00
IUUC-Stu-112812	Solanum tuberosum	23.47	2.00e-20	94.00
IUUC-Sar-113326	Sorex araneus	93.75	1.00e-140	493.00
IUUC-Sbi-114426	Sorghum bicolor	22.24	1.00e-24	107.00
IUUC-Tgu-116726	Taeniopygia guttata	69.83	0.00e+00	837.00
IUUC-Tru-117848	Takifugu rubripes	54.62	0.00e+00	645.00
IUUC-Tsy-119091	Tarsius syrichta	66.43	1.00e-134	473.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.15	0.00e+00	649.00
IUUC-Tca-121576	Theobroma cacao	25.49	4.00e-17	83.20
IUUC-Tae-125105	Triticum aestivum	22.46	8.00e-22	98.60
IUUC-Tbe-127832	Tupaia belangeri	92.56	0.00e+00	971.00
IUUC-Ttr-128812	Tursiops truncatus	88.21	0.00e+00	991.00
IUUC-Xma-133557	Xiphophorus maculatus	55.01	0.00e+00	642.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence