iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116726

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01123041

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000005464.1	ENSTGUT00000005686.1	ENSTGUP00000005628.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-15	54.9	155	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
            ++s+tcl+  +d ++l+s++   tik+WDl t
   Q: 155  DNSSITCLCIsPDgKMLLSAG--RTIKLWDLET 185
           5799*******999*****88..88*****977 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

ADPPPPLSPR GCRLFASAGS DGRLRVWDTA GSRLQHEFVP SAHLSAACTC LAWAPLEARQ 60
PLGKDGPQRK KRKSEGGEVD KQLDILAIGT AVGSILLYST VKGELQSKLD GGHDSRVNCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGATCCGC CTCCGCCGCT CTCGCCCCGC GGGTGCCGCT TGTTCGCCTC GGCCGGGTCC 60
GACGGGAGGC TGCGAGTGTG GGACACGGCC GGCAGCCGCC TGCAGCACGA GTTCGTGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	70.00	0.00e+00	818.00
IUUC-Atr-002533	Amborella trichopoda	22.38	2.00e-27	117.00
IUUC-Apl-003242	Anas platyrhynchos	88.64	0.00e+00	997.00
IUUC-Aca-004607	Anolis carolinensis	73.74	0.00e+00	898.00
IUUC-Aly-006074	Arabidopsis lyrata	24.75	6.00e-16	78.60
IUUC-Ath-007222	Arabidopsis thaliana	24.33	7.00e-15	75.10
IUUC-Ame-011014	Astyanax mexicanus	55.37	3.00e-179	621.00
IUUC-Bta-012605	Bos taurus	70.64	0.00e+00	825.00
IUUC-Bdi-014072	Brachypodium distachyon	21.70	1.00e-20	94.40
IUUC-Bol-016255	Brassica oleracea	23.54	2.00e-24	106.00
IUUC-Bra-016850	Brassica rapa	22.67	6.00e-24	105.00
IUUC-Cja-019620	Callithrix jacchus	70.00	0.00e+00	813.00
IUUC-Cfa-020520	Canis familiaris	69.46	0.00e+00	820.00
IUUC-Cpo-022456	Cavia porcellus	67.63	0.00e+00	775.00
IUUC-Cho-024726	Choloepus hoffmanni	68.70	0.00e+00	782.00
IUUC-Cin-025761	Ciona intestinalis	35.30	1.00e-97	350.00
IUUC-Dre-028051	Danio rerio	56.37	6.00e-176	610.00
IUUC-Dno-030031	Dasypus novemcinctus	69.37	0.00e+00	813.00
IUUC-Dme-031653	Drosophila melanogaster	27.88	3.00e-47	182.00
IUUC-Ete-032863	Echinops telfairi	83.92	2.00e-72	266.00
IUUC-Eca-033243	Equus caballus	72.75	0.00e+00	737.00
IUUC-Eeu-034970	Erinaceus europaeus	68.79	2.00e-179	621.00
IUUC-Fca-036009	Felis catus	69.83	0.00e+00	817.00
IUUC-Fal-037264	Ficedula albicollis	93.40	0.00e+00	1032.00
IUUC-Gmo-039124	Gadus morhua	55.59	3.00e-177	614.00
IUUC-Gga-040862	Gallus gallus	87.62	0.00e+00	1054.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.47	0.00e+00	627.00
IUUC-Gma-043981	Glycine max	22.56	5.00e-13	69.30
IUUC-Ggo-044432	Gorilla gorilla	69.49	0.00e+00	808.00
IUUC-Hsa-047036	Homo sapiens	69.66	0.00e+00	808.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	68.81	0.00e+00	793.00
IUUC-Lch-049553	Latimeria chalumnae	63.32	0.00e+00	788.00
IUUC-Laf-053462	Loxodonta africana	67.80	0.00e+00	813.00
IUUC-Mcc-055239	Macaca mulatta	69.83	0.00e+00	809.00
IUUC-Mtr-057977	Medicago truncatula	22.13	8.00e-18	85.10
IUUC-Mga-060079	Meleagris gallopavo	88.39	0.00e+00	959.00
IUUC-Mmr-061472	Microcebus murinus	68.64	0.00e+00	806.00
IUUC-Mdo-061972	Monodelphis domestica	72.96	0.00e+00	861.00
IUUC-Mmu-063354	Mus musculus	68.14	0.00e+00	783.00
IUUC-Mac-065064	Musa acuminata	24.33	2.00e-19	89.40
IUUC-Mpu-066877	Mustela putorius furo	70.47	0.00e+00	827.00
IUUC-Mlu-067476	Myotis lucifugus	68.64	0.00e+00	790.00
IUUC-Nle-069119	Nomascus leucogenys	69.83	0.00e+00	808.00
IUUC-Ont-072093	Oreochromis niloticus	55.67	0.00e+00	674.00
IUUC-Oan-072944	Ornithorhynchus anatinus	69.93	0.00e+00	818.00
IUUC-Ocu-074472	Oryctolagus cuniculus	69.32	0.00e+00	791.00
IUUC-Oba-075009	Oryza barthii	21.83	2.00e-16	80.90
IUUC-Ogl-077189	Oryza glaberrima	20.75	1.00e-16	80.90
IUUC-Oin-079064	Oryza indica	21.83	3.00e-16	79.70
IUUC-Opu-083604	Oryza punctata	21.89	3.00e-15	76.60
IUUC-Oru-084620	Oryza rufipogon	21.83	5.00e-16	79.00
IUUC-Osa-085345	Oryza sativa	21.83	2.00e-16	80.90
IUUC-Ola-086626	Oryzias latipes	54.80	0.00e+00	674.00
IUUC-Oga-087911	Otolemur garnettii	68.53	0.00e+00	795.00
IUUC-Ptr-091603	Pan troglodytes	69.83	0.00e+00	809.00
IUUC-Pan-092569	Papio anubis	69.83	0.00e+00	809.00
IUUC-Pma-094287	Petromyzon marinus	52.12	0.00e+00	639.00
IUUC-Ppa-095327	Physcomitrella patens	27.15	3.00e-29	123.00
IUUC-Pfo-097292	Poecilia formosa	55.41	0.00e+00	639.00
IUUC-Pab-097878	Pongo abelii	69.83	0.00e+00	808.00
IUUC-Pop-099418	Populus trichocarpa	22.88	9.00e-18	84.70
IUUC-Pca-100941	Procavia capensis	64.50	0.00e+00	736.00
IUUC-Ppe-101779	Prunus persica	22.24	1.00e-21	97.40
IUUC-Pva-102493	Pteropus vampyrus	63.56	0.00e+00	730.00
IUUC-Rno-105084	Rattus norvegicus	67.29	0.00e+00	766.00
IUUC-Sha-107486	Sarcophilus harrisii	71.55	0.00e+00	857.00
IUUC-Smo-108825	Selaginella moellendorffii	23.67	3.00e-21	96.70
IUUC-Sit-110825	Setaria italica	21.97	6.00e-20	92.00
IUUC-Sly-111365	Solanum lycopersicum	22.01	1.00e-17	84.70
IUUC-Stu-112812	Solanum tuberosum	23.54	3.00e-16	79.70
IUUC-Sar-113326	Sorex araneus	71.43	3.00e-105	375.00
IUUC-Sbi-114426	Sorghum bicolor	21.55	1.00e-21	97.40
IUUC-Tru-117848	Takifugu rubripes	55.02	0.00e+00	642.00
IUUC-Tsy-119091	Tarsius syrichta	53.81	1.00e-109	390.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.35	0.00e+00	634.00
IUUC-Tca-121576	Theobroma cacao	24.45	9.00e-18	85.10
IUUC-Tae-125105	Triticum aestivum	21.25	3.00e-21	96.70
IUUC-Tbe-127832	Tupaia belangeri	71.97	0.00e+00	750.00
IUUC-Ttr-128812	Tursiops truncatus	72.62	0.00e+00	754.00
IUUC-Xma-133557	Xiphophorus maculatus	55.74	0.00e+00	642.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence