iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111533

Ensembl Protein ID

Solyc10g080180.1.1

UniProt Accession

K4D2Q9; K4D2Q9_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g080180.1	Solyc10g080180.1.1	Solyc10g080180.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-13	48.6	328	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           + v++ af +d   l+s+++Dg i+ WDlrt ++++
   Q: 328  GTVRSAAFsDDgQQLLSSGGDGHIYHWDLRTRTCIH 363
           689*****877899*****************99986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEKLENLLFG SLYNPVGFGK DDDDEKRDDG RNDSAMFFVD RAADSALSVY EGDAQLVQEG 60
IIEVEKERKP VWVDDEEEKA RIKLASVNRL RKLRKEEGED VVSGSTYVER LRAQHAKLNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAGC TTGAGAACTT ATTGTTTGGA TCCTTGTATA ACCCAGTTGG TTTCGGGAAG 60
GATGATGACG ATGAAAAGCG AGATGATGGC AGAAATGATT CTGCTATGTT CTTTGTGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	61.32	1.00e-179	622.00
IUUC-Aml-002252	Ailuropoda melanoleuca	38.85	4.00e-78	284.00
IUUC-Atr-002575	Amborella trichopoda	60.76	1.00e-178	618.00
IUUC-Aly-006512	Arabidopsis lyrata	66.67	0.00e+00	630.00
IUUC-Ath-007244	Arabidopsis thaliana	64.62	0.00e+00	636.00
IUUC-Ago-007895	Ashbya gossypii	29.89	1.00e-48	186.00
IUUC-Acl-008343	Aspergillus clavatus	26.44	1.00e-46	180.00
IUUC-Afl-008445	Aspergillus flavus	29.34	6.00e-53	201.00
IUUC-Aor-009986	Aspergillus oryzae	29.61	3.00e-52	199.00
IUUC-Ame-011338	Astyanax mexicanus	39.58	1.00e-73	269.00
IUUC-Bgr-012201	Blumeria graminis	28.52	6.00e-52	197.00
IUUC-Bta-013058	Bos taurus	39.78	3.00e-80	291.00
IUUC-Bci-013619	Botrytis cinerea	28.26	5.00e-49	187.00
IUUC-Bdi-014771	Brachypodium distachyon	59.16	4.00e-169	587.00
IUUC-Bol-015230	Brassica oleracea	63.12	2.00e-170	591.00
IUUC-Bra-017041	Brassica rapa	62.62	4.00e-167	580.00
IUUC-Cel-018293	Caenorhabditis elegans	28.13	4.00e-43	168.00
IUUC-Cja-019503	Callithrix jacchus	39.29	6.00e-80	290.00
IUUC-Cfa-020743	Canis familiaris	39.27	3.00e-78	285.00
IUUC-Cpo-021488	Cavia porcellus	44.92	5.00e-76	277.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	38.25	3.00e-85	308.00
IUUC-Csa-023110	Chlorocebus sabaeus	38.41	3.00e-78	285.00
IUUC-Cin-025208	Ciona intestinalis	38.28	3.00e-69	254.00
IUUC-Cme-027351	Cyanidioschyzon merolae	30.12	3.00e-51	195.00
IUUC-Dre-027524	Danio rerio	30.75	4.00e-61	228.00
IUUC-Dno-029243	Dasypus novemcinctus	39.04	1.00e-76	280.00
IUUC-Dor-030110	Dipodomys ordii	44.55	8.00e-75	273.00
IUUC-Dse-031217	Dothistroma septosporum	29.59	2.00e-52	199.00
IUUC-Dme-031999	Drosophila melanogaster	28.64	2.00e-48	185.00
IUUC-Eca-034350	Equus caballus	38.16	2.00e-77	282.00
IUUC-Eeu-034991	Erinaceus europaeus	43.49	2.00e-73	269.00
IUUC-Fal-036614	Ficedula albicollis	40.43	5.00e-72	264.00
IUUC-Gmo-039183	Gadus morhua	38.86	6.00e-72	263.00
IUUC-Gga-040922	Gallus gallus	38.02	3.00e-77	281.00
IUUC-Gac-041475	Gasterosteus aculeatus	34.62	2.00e-67	248.00
IUUC-Gma-043598	Glycine max	69.38	0.00e+00	696.00
IUUC-Ggo-044517	Gorilla gorilla	39.51	9.00e-80	290.00
IUUC-Hsa-045741	Homo sapiens	39.51	1.00e-79	290.00
IUUC-Hvu-047463	Hordeum vulgare	65.52	9.00e-64	234.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	37.69	2.00e-77	282.00
IUUC-Kpa-049335	Komagataella pastoris	29.36	5.00e-53	201.00
IUUC-Lch-049816	Latimeria chalumnae	37.05	4.00e-74	271.00
IUUC-Lpe-051140	Leersia perrieri	61.38	3.00e-172	597.00
IUUC-Loc-051942	Lepisosteus oculatus	35.07	8.00e-68	250.00
IUUC-Laf-054245	Loxodonta africana	38.88	5.00e-79	288.00
IUUC-Meu-056300	Macropus eugenii	38.37	2.00e-62	232.00
IUUC-Mor-057184	Magnaporthe oryzae	29.61	4.00e-41	162.00
IUUC-Mtr-058019	Medicago truncatula	69.59	0.00e+00	670.00
IUUC-Mga-060179	Meleagris gallopavo	38.01	9.00e-76	276.00
IUUC-Mvi-060435	Microbotryum violaceum	34.28	3.00e-66	245.00
IUUC-Mdo-062187	Monodelphis domestica	42.57	3.00e-72	265.00
IUUC-Mmu-063386	Mus musculus	38.64	6.00e-77	280.00
IUUC-Mpu-066084	Mustela putorius furo	43.50	8.00e-76	277.00
IUUC-Mlu-068130	Myotis lucifugus	38.16	3.00e-76	278.00
IUUC-Nle-069743	Nomascus leucogenys	35.57	2.00e-65	243.00
IUUC-Opr-071111	Ochotona princeps	44.38	9.00e-77	280.00
IUUC-Ont-071979	Oreochromis niloticus	34.55	3.00e-72	265.00
IUUC-Ocu-073754	Oryctolagus cuniculus	39.96	3.00e-80	291.00
IUUC-Oba-075007	Oryza barthii	61.01	5.00e-172	597.00
IUUC-Obr-076447	Oryza brachyantha	61.01	2.00e-174	604.00
IUUC-Ogl-077733	Oryza glaberrima	61.01	4.00e-172	597.00
IUUC-Ogu-078828	Oryza glumaepatula	61.01	2.00e-172	598.00
IUUC-Oin-080152	Oryza indica	61.01	9.00e-173	599.00
IUUC-Olo-080983	Oryza longistaminata	59.80	3.00e-170	590.00
IUUC-Oni-082443	Oryza nivara	61.01	5.00e-173	600.00
IUUC-Opu-083771	Oryza punctata	60.61	3.00e-167	580.00
IUUC-Oru-084272	Oryza rufipogon	61.01	1.00e-172	598.00
IUUC-Osa-085885	Oryza sativa	61.01	2.00e-174	604.00
IUUC-Olu-087644	Ostreococcus lucimarinus	26.25	3.00e-30	125.00
IUUC-Oga-088834	Otolemur garnettii	39.96	2.00e-79	289.00
IUUC-Oar-089712	Ovis aries	39.56	1.00e-79	290.00
IUUC-Pan-092561	Papio anubis	38.85	5.00e-78	284.00
IUUC-Ppa-095397	Physcomitrella patens	51.35	5.00e-126	443.00
IUUC-Pfo-097068	Poecilia formosa	33.74	7.00e-69	254.00
IUUC-Pop-099471	Populus trichocarpa	70.00	0.00e+00	657.00
IUUC-Ppe-101684	Prunus persica	71.37	0.00e+00	706.00
IUUC-Pva-102851	Pteropus vampyrus	36.95	3.00e-70	258.00
IUUC-Pgr-103370	Puccinia graminis	32.85	2.00e-59	223.00
IUUC-Ptt-103838	Puccinia triticina	30.63	8.00e-50	190.00
IUUC-Rno-104910	Rattus norvegicus	39.27	4.00e-77	281.00
IUUC-Sce-106258	Saccharomyces cerevisiae	30.96	8.00e-52	197.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	30.37	2.00e-61	229.00
IUUC-Spo-108268	Schizosaccharomyces pombe	33.62	1.00e-70	259.00
IUUC-Smo-108815	Selaginella moellendorffii	52.74	2.00e-130	458.00
IUUC-Sit-109706	Setaria italica	61.35	3.00e-173	600.00
IUUC-Stu-112853	Solanum tuberosum	96.59	0.00e+00	939.00
IUUC-Sbi-114747	Sorghum bicolor	61.03	2.00e-180	624.00
IUUC-Ssc-115916	Sus scrofa	37.75	7.00e-79	287.00
IUUC-Tgu-117291	Taeniopygia guttata	39.82	3.00e-70	258.00
IUUC-Tru-118724	Takifugu rubripes	37.94	3.00e-71	261.00
IUUC-Tsy-118928	Tarsius syrichta	47.69	7.00e-54	204.00
IUUC-Tca-121229	Theobroma cacao	70.51	0.00e+00	711.00
IUUC-Tae-123641	Triticum aestivum	61.32	2.00e-179	621.00
IUUC-Tur-126082	Triticum urartu	51.91	4.00e-97	347.00
IUUC-Ttr-128904	Tursiops truncatus	45.16	1.00e-65	243.00
IUUC-Vpa-130817	Vicugna pacos	38.27	4.00e-80	291.00
IUUC-Vvi-130982	Vitis vinifera	74.19	0.00e+00	713.00
IUUC-Xtr-132971	Xenopus tropicalis	39.08	8.00e-85	306.00
IUUC-Xma-133391	Xiphophorus maculatus	33.98	9.00e-69	253.00
IUUC-Yli-134613	Yarrowia lipolytica	29.44	2.00e-54	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence