iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108683

Ensembl Protein ID

EFJ22347

UniProt Accession

D8RZR9; D8RZR9_SELML

Genbank Protein ID

EFJ22347.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377596

Gene Name

SELMODRAFT_416582

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_416582	EFJ22347	EFJ22347

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-24	83.7	426	465
UBD/Beta-Prp	1.30e-53	182.9	285	467

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+++v ++    +d+ +vs + D  ik+WD+r++++ ++
   Q: 426  GHQSPVVDVVVneDDNQIVSVATDSIIKIWDMRSNRCMQT 465
           8*******9789766**********************986 PP

UBD/Beta-Prp

   S: 99   slsfsp..sgdklvsGshdrtirvwdletgqclee...................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..t 176
           + ++ +  ++dkl+ G++  +++v+d + ++  e                    + ++h+ +v+ +++ + ++ l s+s D+t+ + dl  +k  r++  +
   Q: 285  CATWVRtpENDKLLYGDDRGYLHVYDFSDEWGGEIpriaagvteellpgmseklPWKIHNNWVTRIKYLSHSSSLLSCSMDSTLLMLDL--EKQKRKWsgK 383
           5555554589*********************998899**************************************************99..6677888635 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlq 261
           + h++ +  l++ ++ +++v+++l + v++w+  t +++ +l+gh+++v +v + ++d+ +vs++ D  i+iWd+rs+ +++t+ 
   Q: 384  E-HHHGIFALDYCRSFNFIVTCGLERNVNIWNPFTAKIMGQLIGHQSPVVDVVVNEDDNQIVSVATDSIIKIWDMRSNRCMQTVV 467
           5.********************************************************************************975 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MADGDNNEFD VFKSSKWRGN RKSSFAQIFH ARERESGAHG GKLPPKPGGP SDRAPVSKSK 60
PQPEANFIKT CKNIKDVASE LSEKEMEHFF MKVDVNSKGV VDFDDFTSYI LQQQLAKEDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGATG GAGATAACAA CGAGTTCGAC GTTTTCAAGT CATCCAAGTG GCGTGGAAAT 60
CGAAAGTCGA GTTTCGCGGT TAGATTTATT TTTTGGAACG CATTCCGGCT CTGAGCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011992--EF-hand-dom_pair
IPR002048--EF_hand_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50222--EF_HAND_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005509--F:calcium ion binding

KEGG

smo:SELMODRAFT_416582

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022835	Chlamydomonas reinhardtii	26.08	5.00e-21	96.70
IUUC-Csa-023945	Chlorocebus sabaeus	24.34	1.00e-27	118.00
IUUC-Dor-030182	Dipodomys ordii	24.94	2.00e-27	117.00
IUUC-Ete-033152	Echinops telfairi	24.90	7.00e-25	108.00
IUUC-Eeu-034535	Erinaceus europaeus	20.60	8.00e-14	71.60
IUUC-Gga-041212	Gallus gallus	24.34	7.00e-28	118.00
IUUC-Ggo-044932	Gorilla gorilla	24.18	2.00e-40	160.00
IUUC-Hsa-046963	Homo sapiens	24.33	6.00e-42	166.00
IUUC-Laf-054508	Loxodonta africana	28.29	5.00e-32	131.00
IUUC-Nle-069533	Nomascus leucogenys	23.04	1.00e-26	114.00
IUUC-Oga-087999	Otolemur garnettii	25.34	3.00e-34	139.00
IUUC-Ptr-090859	Pan troglodytes	23.76	9.00e-29	121.00
IUUC-Psi-093985	Pelodiscus sinensis	31.90	3.00e-35	142.00
IUUC-Ppa-095538	Physcomitrella patens	38.43	6.00e-70	258.00
IUUC-Pca-100863	Procavia capensis	23.36	4.00e-17	83.20
IUUC-Pva-102863	Pteropus vampyrus	24.79	1.00e-30	127.00
IUUC-Sar-113154	Sorex araneus	21.71	9.00e-09	55.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence