iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-040903

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04000118

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000017011.5	ENSGALT00000027478.5	ENSGALP00000027426.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-08	33.5	18	66

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +         f+CP+Cr
   Q: 18   CPICCSLFDD-PRVLPCSHNFCRKCLEGIldgnVRNVLWRPSPFKCPTCR 66
           ********99.**************96665655455556999999****8 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MTLVLRDMME LLEEDLTCPI CCSLFDDPRV LPCSHNFCRK CLEGILDGNV RNVLWRPSPF 60
KCPTCRKETP VTGVNSLQVN YSLKGIVEKY NKIKVTPKMP VCKVHSGQPL NIFCRTDMQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGGCCGCC GGGCGGGACC CGGCCCGGGA GGGTGAGTAG CGGCGGGGGG ACACCCTTTG 60
TCTGCGGCTG CAGCGCGGCG CGGGGCGGCC ATCGGCGCTG TTCTGAGCCC GCCTGCCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0016021--C:integral component of membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

gga:418872

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	75.12	7.00e-176	609.00
IUUC-Apl-004168	Anas platyrhynchos	94.61	0.00e+00	780.00
IUUC-Aca-004395	Anolis carolinensis	77.94	0.00e+00	662.00
IUUC-Ame-011325	Astyanax mexicanus	48.46	2.00e-69	255.00
IUUC-Bta-012613	Bos taurus	75.49	1.00e-174	605.00
IUUC-Cja-018856	Callithrix jacchus	74.63	0.00e+00	642.00
IUUC-Cfa-021019	Canis familiaris	75.12	2.00e-173	601.00
IUUC-Cpo-021845	Cavia porcellus	75.00	2.00e-174	604.00
IUUC-Csa-023380	Chlorocebus sabaeus	75.49	1.00e-176	612.00
IUUC-Cho-024733	Choloepus hoffmanni	63.06	5.00e-66	244.00
IUUC-Dre-028675	Danio rerio	51.82	3.00e-117	414.00
IUUC-Dno-030018	Dasypus novemcinctus	75.25	0.00e+00	625.00
IUUC-Dor-030599	Dipodomys ordii	68.77	2.00e-97	348.00
IUUC-Ete-033134	Echinops telfairi	74.63	0.00e+00	631.00
IUUC-Eca-033931	Equus caballus	75.37	2.00e-174	604.00
IUUC-Eeu-034903	Erinaceus europaeus	74.39	2.00e-173	601.00
IUUC-Fca-035642	Felis catus	76.23	1.00e-174	605.00
IUUC-Fal-037108	Ficedula albicollis	94.61	0.00e+00	810.00
IUUC-Ggo-044635	Gorilla gorilla	74.88	2.00e-177	614.00
IUUC-Hsa-046345	Homo sapiens	74.88	3.00e-177	613.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	76.16	7.00e-169	586.00
IUUC-Lch-050599	Latimeria chalumnae	62.41	9.00e-152	529.00
IUUC-Loc-052378	Lepisosteus oculatus	63.40	2.00e-118	418.00
IUUC-Laf-053332	Loxodonta africana	76.23	3.00e-180	624.00
IUUC-Mcc-054705	Macaca mulatta	75.12	3.00e-176	610.00
IUUC-Meu-056825	Macropus eugenii	77.56	0.00e+00	659.00
IUUC-Mga-059528	Meleagris gallopavo	97.55	0.00e+00	834.00
IUUC-Mmr-060688	Microcebus murinus	75.37	8.00e-176	609.00
IUUC-Mdo-061882	Monodelphis domestica	75.91	0.00e+00	653.00
IUUC-Mmu-064352	Mus musculus	73.28	2.00e-178	617.00
IUUC-Mpu-066712	Mustela putorius furo	75.73	3.00e-162	564.00
IUUC-Mlu-068093	Myotis lucifugus	75.06	4.00e-173	600.00
IUUC-Nle-069310	Nomascus leucogenys	74.75	1.00e-175	608.00
IUUC-Ont-071759	Oreochromis niloticus	60.06	1.00e-112	399.00
IUUC-Oan-073673	Ornithorhynchus anatinus	75.12	0.00e+00	651.00
IUUC-Ocu-074192	Oryctolagus cuniculus	75.37	1.00e-177	615.00
IUUC-Ola-087424	Oryzias latipes	57.89	8.00e-113	400.00
IUUC-Oga-088808	Otolemur garnettii	76.47	8.00e-176	609.00
IUUC-Oar-089553	Ovis aries	75.12	1.00e-175	608.00
IUUC-Ptr-090518	Pan troglodytes	74.63	1.00e-175	608.00
IUUC-Pan-092781	Papio anubis	75.12	2.00e-176	611.00
IUUC-Psi-093914	Pelodiscus sinensis	89.24	0.00e+00	771.00
IUUC-Pfo-096346	Poecilia formosa	47.92	9.00e-111	393.00
IUUC-Pca-100914	Procavia capensis	74.63	0.00e+00	633.00
IUUC-Pva-102728	Pteropus vampyrus	74.88	9.00e-175	605.00
IUUC-Rno-105922	Rattus norvegicus	74.02	8.00e-170	589.00
IUUC-Sha-107124	Sarcophilus harrisii	76.28	0.00e+00	660.00
IUUC-Sja-107830	Schizosaccharomyces japonicus	36.05	8.00e-08	51.60
IUUC-Sar-113607	Sorex araneus	74.15	1.00e-169	588.00
IUUC-Ssc-116355	Sus scrofa	75.98	3.00e-176	610.00
IUUC-Tgu-116476	Taeniopygia guttata	94.12	0.00e+00	805.00
IUUC-Tru-118737	Takifugu rubripes	58.44	6.00e-113	400.00
IUUC-Tsy-118908	Tarsius syrichta	74.63	7.00e-179	619.00
IUUC-Tbe-127258	Tupaia belangeri	75.85	1.00e-177	615.00
IUUC-Vpa-130138	Vicugna pacos	76.10	3.00e-176	610.00
IUUC-Xtr-132100	Xenopus tropicalis	57.80	2.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence