iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010791.1	ENSSHAT00000012714.1	ENSSHAP00000012610.1
ENSSHAG00000010791.1	ENSSHAT00000012715.1	ENSSHAP00000012611.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-06	27.3	101	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           +Ht+++t l++ ++ + lvsG + g++ +W+l+
   Q: 101  THTADITVLNWsTNgNCLVSGDRLGVLVLWRLD 133
           5**********95569***************86 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MALYFDHRIE APDSVGAPSH ITWHPLHPLL AVASVNTTSG GSIDVYLEQG EHVPETHIER 60
AFRAMSLSWH PTRMILAIGW ETGEVIVFNK QDKEQHTVPT THTADITVLN WSTNGNCLVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTAGATAC TGACTGGATT GATAATTTAC CATGGCACTC TACTTTGATC ACCGGATAGA 60
GGCCCCTGAC TCAGTCGGGG CTCCTTCCCA TATAACATGG CATCCTCTTC ATCCATTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011044--Quino_amine_DH_bsu
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00028--TPR
SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0030991--C:intraciliary transport particle A
GO:0032391--C:photoreceptor connecting cilium
GO:0001750--C:photoreceptor outer segment
GO:0007368--P:determination of left/right symmetry
GO:1990403--P:embryonic brain development
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0007507--P:heart development
GO:0035721--P:intraciliary retrograde transport
GO:0021532--P:neural tube patterning
GO:1905515--P:non-motile cilium assembly
GO:0035845--P:photoreceptor cell outer segment organization
GO:0061512--P:protein localization to cilium
GO:1902017--P:regulation of cilium assembly
GO:0008589--P:regulation of smoothened signaling pathway
GO:0072001--P:renal system development
GO:0060041--P:retina development in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001534	Ailuropoda melanoleuca	82.04	0.00e+00	2464.00
IUUC-Apl-004045	Anas platyrhynchos	69.89	0.00e+00	1184.00
IUUC-Aca-004856	Anolis carolinensis	74.62	0.00e+00	2255.00
IUUC-Bta-013342	Bos taurus	78.04	0.00e+00	2325.00
IUUC-Cja-019368	Callithrix jacchus	76.12	0.00e+00	800.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	34.21	0.00e+00	781.00
IUUC-Csa-023417	Chlorocebus sabaeus	80.11	0.00e+00	2370.00
IUUC-Cin-025150	Ciona intestinalis	48.02	0.00e+00	1395.00
IUUC-Csv-025810	Ciona savignyi	32.03	3.00e-88	319.00
IUUC-Dre-027680	Danio rerio	60.98	0.00e+00	1825.00
IUUC-Eca-033444	Equus caballus	83.72	0.00e+00	2604.00
IUUC-Fca-036025	Felis catus	80.76	0.00e+00	2444.00
IUUC-Gmo-038491	Gadus morhua	63.15	0.00e+00	1770.00
IUUC-Loc-052740	Lepisosteus oculatus	68.24	0.00e+00	2066.00
IUUC-Mpu-065874	Mustela putorius furo	81.41	0.00e+00	2450.00
IUUC-Mlu-067077	Myotis lucifugus	82.46	0.00e+00	2504.00
IUUC-Ont-072303	Oreochromis niloticus	60.81	0.00e+00	1783.00
IUUC-Ola-086338	Oryzias latipes	59.00	0.00e+00	1713.00
IUUC-Ptr-090583	Pan troglodytes	79.42	0.00e+00	2404.00
IUUC-Pan-092689	Papio anubis	79.77	0.00e+00	2363.00
IUUC-Psi-093824	Pelodiscus sinensis	79.59	0.00e+00	2444.00
IUUC-Pma-094497	Petromyzon marinus	61.73	0.00e+00	1872.00
IUUC-Pfo-096612	Poecilia formosa	59.45	0.00e+00	1701.00
IUUC-Pva-102236	Pteropus vampyrus	90.91	0.00e+00	1352.00
IUUC-Tru-118007	Takifugu rubripes	59.44	0.00e+00	1778.00
IUUC-Ttr-128400	Tursiops truncatus	83.24	0.00e+00	1150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence