iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081814

Ensembl Protein ID

OMERI01G11050.1

UniProt Accession

A0A0E0C0N8; A0A0E0C0N8_9ORYZ

Protein Name

Presenilin

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI01G11050	OMERI01G11050.1	OMERI01G11050.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	31.58	4.00e-31	132.00	IUUC-Cel-018553
UBD/Alpha-Helix/CUE	32.96	7.00e-26	115.00	IUUC-Dre-028689
UBD/Alpha-Helix/CUE	32.79	6.00e-29	126.00	IUUC-Hsa-046822

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza meridionalis

Functional Description
(View)

Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.

Protein Sequence
(Fasta)

MDPAAGPPDP APAPGATIST AATVLDGLGA EVLAVMSPVS ICMALVVLLI SLLAPPSSPG 60
SAAQPPPPVT AATLVYLESP TDTPGQKLVG ALLDAAVFVA LVAVVTFVLV ALYYYRCTGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCCG CCGCCGGCCC GCCGGATCCG GCGCCGGCGC CGGGGGCGAC CATCTCCACG 60
GCGGCGACCG TCCTCGACGG CCTCGGCGCG GAGGTGCTCG CGGTGATGTC GCCGGTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN

SMART

SM00730--PSN

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0004190--F:aspartic-type endopeptidase activity
GO:0007219--P:Notch signaling pathway
GO:0016485--P:protein processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000686	Aegilops tauschii	79.29	4.00e-133	468.00
IUUC-Aml-001648	Ailuropoda melanoleuca	33.67	3.00e-33	135.00
IUUC-Atr-003039	Amborella trichopoda	53.18	7.00e-109	386.00
IUUC-Apl-003727	Anas platyrhynchos	31.83	2.00e-33	135.00
IUUC-Aca-004582	Anolis carolinensis	31.39	1.00e-34	140.00
IUUC-Aly-005455	Arabidopsis lyrata	50.75	4.00e-101	360.00
IUUC-Ath-006730	Arabidopsis thaliana	50.74	9.00e-102	363.00
IUUC-Ame-010686	Astyanax mexicanus	30.91	2.00e-28	119.00
IUUC-Bta-013026	Bos taurus	30.40	2.00e-32	132.00
IUUC-Bdi-014196	Brachypodium distachyon	81.10	2.00e-155	541.00
IUUC-Bol-015841	Brassica oleracea	53.19	4.00e-98	350.00
IUUC-Bra-017580	Brassica rapa	51.75	9.00e-84	303.00
IUUC-Cel-018553	Caenorhabditis elegans	31.39	2.00e-42	165.00
IUUC-Cja-019994	Callithrix jacchus	31.33	4.00e-34	138.00
IUUC-Cfa-020074	Canis familiaris	31.90	2.00e-35	142.00
IUUC-Cpo-022237	Cavia porcellus	31.78	1.00e-34	139.00
IUUC-Cre-022747	Chlamydomonas reinhardtii	43.29	3.00e-44	172.00
IUUC-Csa-023537	Chlorocebus sabaeus	31.98	9.00e-36	143.00
IUUC-Cho-024735	Choloepus hoffmanni	32.72	9.00e-29	120.00
IUUC-Cin-025780	Ciona intestinalis	30.70	7.00e-39	154.00
IUUC-Csv-025967	Ciona savignyi	31.39	3.00e-36	145.00
IUUC-Dre-028689	Danio rerio	31.77	7.00e-32	130.00
IUUC-Dno-029758	Dasypus novemcinctus	32.43	6.00e-36	144.00
IUUC-Dor-030609	Dipodomys ordii	47.22	4.00e-19	88.60
IUUC-Dme-031929	Drosophila melanogaster	34.23	3.00e-26	112.00
IUUC-Ete-032487	Echinops telfairi	34.63	8.00e-17	80.90
IUUC-Eca-034387	Equus caballus	32.43	2.00e-26	112.00
IUUC-Eeu-035134	Erinaceus europaeus	34.56	3.00e-31	127.00
IUUC-Fca-036243	Felis catus	31.90	1.00e-34	140.00
IUUC-Fal-036600	Ficedula albicollis	31.53	6.00e-34	137.00
IUUC-Gmo-038550	Gadus morhua	33.33	1.00e-27	116.00
IUUC-Gga-040993	Gallus gallus	31.45	1.00e-35	143.00
IUUC-Gac-042511	Gasterosteus aculeatus	32.20	2.00e-35	142.00
IUUC-Gma-043822	Glycine max	60.94	2.00e-43	168.00
IUUC-Ggo-045338	Gorilla gorilla	33.33	4.00e-27	115.00
IUUC-Hsa-046822	Homo sapiens	31.98	9.00e-36	143.00
IUUC-Hvu-047141	Hordeum vulgare	79.96	6.00e-141	493.00
IUUC-Itr-048420	Ictidomys tridecemlineatus	33.97	1.00e-33	135.00
IUUC-Lch-049638	Latimeria chalumnae	30.80	5.00e-26	111.00
IUUC-Lpe-051132	Leersia perrieri	88.47	2.00e-167	581.00
IUUC-Loc-052427	Lepisosteus oculatus	29.95	2.00e-36	145.00
IUUC-Laf-053979	Loxodonta africana	31.83	5.00e-32	131.00
IUUC-Mcc-055682	Macaca mulatta	31.98	9.00e-36	143.00
IUUC-Meu-056004	Macropus eugenii	27.65	5.00e-22	97.80
IUUC-Mtr-058392	Medicago truncatula	51.51	7.00e-100	356.00
IUUC-Mga-059466	Meleagris gallopavo	32.13	2.00e-35	142.00
IUUC-Mmr-060890	Microcebus murinus	32.43	3.00e-26	112.00
IUUC-Mdo-062122	Monodelphis domestica	30.63	3.00e-29	122.00
IUUC-Mmu-063823	Mus musculus	32.59	9.00e-27	114.00
IUUC-Mac-064858	Musa acuminata	64.49	6.00e-44	170.00
IUUC-Mpu-065927	Mustela putorius furo	32.13	7.00e-36	144.00
IUUC-Mlu-067079	Myotis lucifugus	32.13	2.00e-38	152.00
IUUC-Nle-070180	Nomascus leucogenys	31.98	9.00e-36	143.00
IUUC-Opr-070344	Ochotona princeps	31.53	7.00e-24	104.00
IUUC-Ont-071846	Oreochromis niloticus	31.24	2.00e-32	132.00
IUUC-Oan-072783	Ornithorhynchus anatinus	33.03	1.00e-28	119.00
IUUC-Ocu-074527	Oryctolagus cuniculus	31.85	3.00e-35	142.00
IUUC-Oba-075256	Oryza barthii	97.17	2.00e-163	567.00
IUUC-Obr-076302	Oryza brachyantha	88.46	8.00e-168	582.00
IUUC-Ogl-077097	Oryza glaberrima	94.51	0.00e+00	627.00
IUUC-Ogu-078570	Oryza glumaepatula	97.00	1.00e-174	605.00
IUUC-Oin-079244	Oryza indica	94.07	1.00e-180	624.00
IUUC-Olo-080484	Oryza longistaminata	97.24	8.00e-129	452.00
IUUC-Oni-082057	Oryza nivara	96.75	1.00e-174	605.00
IUUC-Opu-084176	Oryza punctata	95.25	3.00e-175	607.00
IUUC-Oru-084618	Oryza rufipogon	97.00	5.00e-175	606.00
IUUC-Osa-085602	Oryza sativa	96.77	3.00e-176	610.00
IUUC-Ola-086707	Oryzias latipes	31.53	3.00e-27	114.00
IUUC-Olu-087811	Ostreococcus lucimarinus	38.38	1.00e-41	162.00
IUUC-Oga-088560	Otolemur garnettii	32.43	2.00e-26	112.00
IUUC-Oar-090348	Ovis aries	31.31	4.00e-37	148.00
IUUC-Ptr-091060	Pan troglodytes	31.98	9.00e-36	143.00
IUUC-Pan-091742	Papio anubis	33.04	3.00e-27	115.00
IUUC-Psi-093505	Pelodiscus sinensis	32.13	4.00e-35	141.00
IUUC-Pma-094612	Petromyzon marinus	30.63	4.00e-22	98.60
IUUC-Ppa-095431	Physcomitrella patens	43.76	3.00e-92	331.00
IUUC-Pfo-097396	Poecilia formosa	30.56	1.00e-35	143.00
IUUC-Pab-098591	Pongo abelii	31.98	9.00e-36	144.00
IUUC-Pop-099661	Populus trichocarpa	46.14	2.00e-81	295.00
IUUC-Pca-101029	Procavia capensis	30.77	4.00e-30	125.00
IUUC-Ppe-101495	Prunus persica	52.28	5.00e-109	387.00
IUUC-Pva-102934	Pteropus vampyrus	30.63	2.00e-24	106.00
IUUC-Rno-106052	Rattus norvegicus	32.43	2.00e-26	113.00
IUUC-Sha-107045	Sarcophilus harrisii	31.39	1.00e-34	140.00
IUUC-Smo-109325	Selaginella moellendorffii	43.61	7.00e-64	236.00
IUUC-Sit-110624	Setaria italica	83.15	2.00e-148	518.00
IUUC-Sly-110865	Solanum lycopersicum	84.51	1.00e-31	127.00
IUUC-Stu-112433	Solanum tuberosum	51.71	1.00e-102	365.00
IUUC-Sar-113169	Sorex araneus	40.19	5.00e-19	88.20
IUUC-Sbi-114305	Sorghum bicolor	82.33	2.00e-151	528.00
IUUC-Ssc-115766	Sus scrofa	31.11	1.00e-33	137.00
IUUC-Tgu-116469	Taeniopygia guttata	32.40	3.00e-30	125.00
IUUC-Tru-117732	Takifugu rubripes	31.01	1.00e-33	136.00
IUUC-Tsy-119624	Tarsius syrichta	30.80	1.00e-21	96.70
IUUC-Tni-119852	Tetraodon nigroviridis	29.31	3.00e-25	108.00
IUUC-Tca-121865	Theobroma cacao	55.13	1.00e-101	362.00
IUUC-Tae-123984	Triticum aestivum	79.04	1.00e-137	482.00
IUUC-Tur-126237	Triticum urartu	77.81	4.00e-123	433.00
IUUC-Tbe-127632	Tupaia belangeri	33.04	4.00e-27	114.00
IUUC-Ttr-128793	Tursiops truncatus	31.22	4.00e-32	131.00
IUUC-Vpa-130625	Vicugna pacos	39.05	4.00e-18	85.10
IUUC-Vvi-131312	Vitis vinifera	53.59	4.00e-97	347.00
IUUC-Xtr-132756	Xenopus tropicalis	30.49	1.00e-34	140.00
IUUC-Xma-133377	Xiphophorus maculatus	30.86	1.00e-35	143.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence