iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132263

Ensembl Protein ID

ENSXETP00000008850.2

UniProt Accession

F6TJF5; F6TJF5_XENTR

Genbank Protein ID

ENSXETP00000008850

Protein Name

DDB1- and CUL4-associated factor 13

Genbank Nucleotide ID

AAMC01001444

Gene Name

dcaf13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000004092.2	ENSXETT00000008850.2	ENSXETP00000008850.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-26	88.9	65	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+c+a    +  +++sG+ Dg +k+W+l++  + +
   Q: 65   GHRDGVNCIAKhpKSlSTVLSGACDGEVKIWNLTKRECSR 104
           8********7446335679**************9988765 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MKVKVLCRNP DDYVRETKRD LQRVVPRNYD PALHPFEVPR EYTRALNATK LERVFAKPFI 60
ASLDGHRDGV NCIAKHPKSL STVLSGACDG EVKIWNLTKR ECSRTIQAHD GFVRGLCVRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGTGA AGGTTCTGTG CAGGAACCCG GACGATTATG TTCGAGAAAC CAAGAGAGAC 60
TTGCAGAGAG GTGAGTGTCA TGTTATGGGA TTAGCTCAGG GCACATTCCA ATATGCATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013979--TIF_beta_prop-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	79.67	0.00e+00	629.00
IUUC-Atr-002799	Amborella trichopoda	47.98	3.00e-110	392.00
IUUC-Apl-003675	Anas platyrhynchos	81.87	9.00e-179	619.00
IUUC-Aca-004792	Anolis carolinensis	80.22	0.00e+00	643.00
IUUC-Aly-005998	Arabidopsis lyrata	47.17	9.00e-108	383.00
IUUC-Ath-007526	Arabidopsis thaliana	46.90	7.00e-108	384.00
IUUC-Ago-007774	Ashbya gossypii	48.68	3.00e-104	372.00
IUUC-Acl-008024	Aspergillus clavatus	46.69	6.00e-91	327.00
IUUC-Afu-008930	Aspergillus fumigatus	45.78	3.00e-90	325.00
IUUC-Ani-009370	Aspergillus nidulans	45.58	1.00e-92	333.00
IUUC-Ang-009827	Aspergillus niger	47.83	1.00e-94	340.00
IUUC-Aor-010060	Aspergillus oryzae	47.38	2.00e-87	316.00
IUUC-Ate-010434	Aspergillus terreus	45.63	2.00e-77	282.00
IUUC-Ame-011967	Astyanax mexicanus	74.79	2.00e-173	601.00
IUUC-Bgr-011989	Blumeria graminis	47.15	2.00e-93	335.00
IUUC-Bta-013291	Bos taurus	66.67	9.00e-141	493.00
IUUC-Bci-013868	Botrytis cinerea	43.94	9.00e-90	323.00
IUUC-Bdi-014343	Brachypodium distachyon	47.17	4.00e-104	371.00
IUUC-Bol-015740	Brassica oleracea	44.74	2.00e-101	362.00
IUUC-Bra-016689	Brassica rapa	44.74	1.00e-100	360.00
IUUC-Cel-018536	Caenorhabditis elegans	51.79	5.00e-111	394.00
IUUC-Cja-018779	Callithrix jacchus	80.49	0.00e+00	644.00
IUUC-Cfa-020105	Canis familiaris	81.04	0.00e+00	648.00
IUUC-Cpo-021538	Cavia porcellus	81.32	0.00e+00	641.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	65.00	4.00e-29	120.00
IUUC-Csa-023492	Chlorocebus sabaeus	80.22	0.00e+00	643.00
IUUC-Cho-024497	Choloepus hoffmanni	62.45	6.00e-90	324.00
IUUC-Cin-025524	Ciona intestinalis	64.46	4.00e-143	500.00
IUUC-Csv-026197	Ciona savignyi	63.56	2.00e-144	505.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	41.51	2.00e-76	279.00
IUUC-Cne-026840	Cryptococcus neoformans	37.19	2.00e-67	251.00
IUUC-Cme-027111	Cyanidioschyzon merolae	33.68	2.00e-61	229.00
IUUC-Dre-027471	Danio rerio	77.20	0.00e+00	632.00
IUUC-Dno-029790	Dasypus novemcinctus	76.52	5.00e-175	606.00
IUUC-Dor-030971	Dipodomys ordii	62.91	4.00e-136	478.00
IUUC-Dse-031563	Dothistroma septosporum	44.17	3.00e-86	311.00
IUUC-Dme-032161	Drosophila melanogaster	61.81	6.00e-141	493.00
IUUC-Ete-033127	Echinops telfairi	74.32	1.00e-169	589.00
IUUC-Eca-033531	Equus caballus	80.12	9.00e-175	605.00
IUUC-Eeu-034663	Erinaceus europaeus	67.49	2.00e-146	512.00
IUUC-Fca-036258	Felis catus	81.04	0.00e+00	649.00
IUUC-Fal-037456	Ficedula albicollis	82.69	0.00e+00	633.00
IUUC-Fox-038025	Fusarium oxysporum	44.57	7.00e-86	310.00
IUUC-Fso-038344	Fusarium solani	45.64	1.00e-83	303.00
IUUC-Gmo-039643	Gadus morhua	77.20	1.00e-180	625.00
IUUC-Ggr-039816	Gaeumannomyces graminis	46.32	7.00e-89	320.00
IUUC-Gga-040143	Gallus gallus	82.14	0.00e+00	655.00
IUUC-Gac-041665	Gasterosteus aculeatus	77.20	0.00e+00	636.00
IUUC-Gma-043073	Glycine max	48.52	3.00e-107	382.00
IUUC-Ggo-045058	Gorilla gorilla	80.49	0.00e+00	643.00
IUUC-Hsa-046843	Homo sapiens	80.22	0.00e+00	640.00
IUUC-Hvu-047654	Hordeum vulgare	48.64	7.00e-60	223.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	80.22	0.00e+00	638.00
IUUC-Kpa-049232	Komagataella pastoris	46.56	2.00e-102	365.00
IUUC-Lch-050542	Latimeria chalumnae	77.18	0.00e+00	662.00
IUUC-Lpe-051622	Leersia perrieri	46.90	1.00e-104	372.00
IUUC-Loc-052674	Lepisosteus oculatus	72.99	2.00e-170	592.00
IUUC-Lma-053108	Leptosphaeria maculans	44.57	3.00e-90	325.00
IUUC-Laf-053385	Loxodonta africana	80.49	0.00e+00	643.00
IUUC-Mcc-055151	Macaca mulatta	79.67	0.00e+00	640.00
IUUC-Meu-056230	Macropus eugenii	81.43	6.00e-106	377.00
IUUC-Mor-057013	Magnaporthe oryzae	44.14	5.00e-83	301.00
IUUC-Mpo-057530	Magnaporthe poae	46.32	9.00e-90	323.00
IUUC-Mtr-058187	Medicago truncatula	47.71	8.00e-108	383.00
IUUC-Mla-058964	Melampsora laricipopulina	40.00	3.00e-79	288.00
IUUC-Mga-059712	Meleagris gallopavo	83.24	1.00e-180	625.00
IUUC-Mvi-060370	Microbotryum violaceum	33.26	7.00e-63	234.00
IUUC-Mmr-061340	Microcebus murinus	74.73	5.00e-168	583.00
IUUC-Mdo-062978	Monodelphis domestica	81.32	0.00e+00	645.00
IUUC-Mmu-063439	Mus musculus	80.22	0.00e+00	637.00
IUUC-Mac-065129	Musa acuminata	47.17	3.00e-106	378.00
IUUC-Mpu-066548	Mustela putorius furo	72.39	4.00e-151	527.00
IUUC-Mlu-067660	Myotis lucifugus	80.22	0.00e+00	642.00
IUUC-Nfi-068455	Neosartorya fischeri	47.70	1.00e-93	336.00
IUUC-Ncr-068848	Neurospora crassa	40.86	2.00e-75	275.00
IUUC-Nle-069923	Nomascus leucogenys	79.95	0.00e+00	639.00
IUUC-Opr-070279	Ochotona princeps	63.68	2.00e-67	249.00
IUUC-Ont-072234	Oreochromis niloticus	78.85	0.00e+00	640.00
IUUC-Oan-073713	Ornithorhynchus anatinus	78.87	2.00e-94	338.00
IUUC-Ocu-073782	Oryctolagus cuniculus	80.49	0.00e+00	643.00
IUUC-Oba-075161	Oryza barthii	46.63	7.00e-105	374.00
IUUC-Obr-076868	Oryza brachyantha	46.63	2.00e-104	372.00
IUUC-Ogl-077062	Oryza glaberrima	46.63	7.00e-105	374.00
IUUC-Ogu-078308	Oryza glumaepatula	46.63	7.00e-105	374.00
IUUC-Oin-079378	Oryza indica	46.63	7.00e-105	374.00
IUUC-Olo-080638	Oryza longistaminata	43.94	1.00e-94	339.00
IUUC-Oni-082368	Oryza nivara	46.63	7.00e-105	374.00
IUUC-Opu-083628	Oryza punctata	46.63	7.00e-105	374.00
IUUC-Oru-085226	Oryza rufipogon	46.36	2.00e-104	372.00
IUUC-Osa-085368	Oryza sativa	43.56	2.00e-65	241.00
IUUC-Ola-086836	Oryzias latipes	78.30	0.00e+00	640.00
IUUC-Olu-087755	Ostreococcus lucimarinus	47.72	5.00e-107	380.00
IUUC-Oga-088170	Otolemur garnettii	80.77	0.00e+00	646.00
IUUC-Oar-089388	Ovis aries	79.95	0.00e+00	632.00
IUUC-Ptr-090494	Pan troglodytes	80.22	0.00e+00	640.00
IUUC-Pan-091697	Papio anubis	80.22	0.00e+00	643.00
IUUC-Psi-093916	Pelodiscus sinensis	78.02	7.00e-174	603.00
IUUC-Pno-095004	Phaeosphaeria nodorum	42.12	1.00e-81	296.00
IUUC-Ppa-095514	Physcomitrella patens	49.87	2.00e-112	399.00
IUUC-Pfo-097432	Poecilia formosa	78.30	0.00e+00	635.00
IUUC-Pab-098423	Pongo abelii	80.22	0.00e+00	642.00
IUUC-Pop-099649	Populus trichocarpa	47.44	5.00e-106	377.00
IUUC-Pca-100365	Procavia capensis	74.18	4.00e-167	580.00
IUUC-Ppe-101379	Prunus persica	46.90	1.00e-104	373.00
IUUC-Pva-102845	Pteropus vampyrus	79.95	0.00e+00	627.00
IUUC-Pgr-103469	Puccinia graminis	36.40	2.00e-49	189.00
IUUC-Ptt-103980	Puccinia triticina	36.27	8.00e-49	187.00
IUUC-Pte-104111	Pyrenophora teres	45.38	2.00e-91	329.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	45.38	2.00e-91	328.00
IUUC-Rno-105082	Rattus norvegicus	79.95	0.00e+00	635.00
IUUC-Sce-106340	Saccharomyces cerevisiae	49.61	6.00e-105	374.00
IUUC-Sha-106584	Sarcophilus harrisii	80.49	0.00e+00	641.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	44.92	1.00e-94	339.00
IUUC-Spo-108046	Schizosaccharomyces pombe	48.17	3.00e-93	335.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	43.94	2.00e-89	322.00
IUUC-Smo-109548	Selaginella moellendorffii	48.65	1.00e-108	386.00
IUUC-Sit-110242	Setaria italica	46.09	7.00e-102	363.00
IUUC-Sly-111762	Solanum lycopersicum	47.44	2.00e-107	382.00
IUUC-Stu-112156	Solanum tuberosum	46.63	1.00e-105	376.00
IUUC-Sbi-114739	Sorghum bicolor	47.98	2.00e-104	372.00
IUUC-Sre-114951	Sporisorium reilianum	39.10	4.00e-86	311.00
IUUC-Ssc-115510	Sus scrofa	81.04	0.00e+00	642.00
IUUC-Tgu-117234	Taeniopygia guttata	82.35	6.00e-172	596.00
IUUC-Tru-117986	Takifugu rubripes	78.26	0.00e+00	631.00
IUUC-Tsy-119252	Tarsius syrichta	76.37	4.00e-170	591.00
IUUC-Tni-119785	Tetraodon nigroviridis	79.12	0.00e+00	634.00
IUUC-Tca-121222	Theobroma cacao	46.09	5.00e-105	374.00
IUUC-Tre-122243	Trichoderma reesei	46.36	3.00e-85	308.00
IUUC-Tvi-122293	Trichoderma virens	46.36	9.00e-84	303.00
IUUC-Tae-125191	Triticum aestivum	46.09	9.00e-96	343.00
IUUC-Tur-126098	Triticum urartu	44.01	7.00e-91	327.00
IUUC-Tme-127200	Tuber melanosporum	47.93	2.00e-103	369.00
IUUC-Tbe-127568	Tupaia belangeri	77.43	7.00e-109	387.00
IUUC-Ttr-129185	Tursiops truncatus	73.83	1.00e-166	579.00
IUUC-Uma-129353	Ustilago maydis	39.57	1.00e-85	310.00
IUUC-Vda-129768	Verticillium dahliae	43.13	6.00e-83	301.00
IUUC-Vpa-130572	Vicugna pacos	80.22	0.00e+00	641.00
IUUC-Vvi-131555	Vitis vinifera	46.90	2.00e-105	375.00
IUUC-Xma-133925	Xiphophorus maculatus	77.75	0.00e+00	634.00
IUUC-Yli-134384	Yarrowia lipolytica	47.54	2.00e-98	352.00
IUUC-Zma-135616	Zea mays	47.71	5.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence