iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116203

Ensembl Protein ID

ENSSSCP00000021297.1

UniProt Accession

I3LB78; I3LB78_PIG

Protein Name

Uncharacterized protein

Gene Name

WDR78

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000022305.1	ENSSSCT00000025606.1	ENSSSCP00000021297.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-12	47.8	363	395

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           ++vt+++f   s +ll++G ++gti ++++ ++
   Q: 363  CGVTSVDFsigSPNLLAVGYHNGTIAIYNVQSN 395
           67********7339***************9876 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

RSVLGSSTVS KSSVSITESM AEDLEEPSYK RERLTSFTDL RVMRATPGKI VTKEDLDKTI 60
EIILTETETM SFFNLPTIMV SVESEEAEKV SQRNKNYENL CRNRLGNDLY VERMIQTING 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTCATTAT TAAAGGTCAG TTTTAGGAAG CAGCACAGTT TCTAAGTCAA GTGTATCTAT 60
TACTGAATCC ATGGCAGAAG ACTTAGAAGA ACCATCCTAT AAACGGGAAA GATTGACTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	86.28	0.00e+00	1110.00
IUUC-Apl-004037	Anas platyrhynchos	52.82	0.00e+00	716.00
IUUC-Aca-004686	Anolis carolinensis	56.99	0.00e+00	736.00
IUUC-Ame-010641	Astyanax mexicanus	43.87	9.00e-153	533.00
IUUC-Bta-012779	Bos taurus	89.26	0.00e+00	1139.00
IUUC-Cja-019217	Callithrix jacchus	84.89	0.00e+00	1066.00
IUUC-Cfa-020613	Canis familiaris	86.72	0.00e+00	1105.00
IUUC-Cpo-022374	Cavia porcellus	76.37	0.00e+00	1026.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	37.95	1.00e-64	241.00
IUUC-Csa-023471	Chlorocebus sabaeus	84.73	0.00e+00	1073.00
IUUC-Cho-024485	Choloepus hoffmanni	74.70	0.00e+00	895.00
IUUC-Cin-025295	Ciona intestinalis	46.76	5.00e-157	548.00
IUUC-Csv-025888	Ciona savignyi	47.27	8.00e-160	556.00
IUUC-Dre-027657	Danio rerio	45.29	7.00e-165	573.00
IUUC-Dno-029422	Dasypus novemcinctus	77.65	0.00e+00	992.00
IUUC-Dor-030738	Dipodomys ordii	35.28	1.00e-59	224.00
IUUC-Dme-032178	Drosophila melanogaster	32.19	5.00e-51	196.00
IUUC-Ete-032340	Echinops telfairi	72.64	6.00e-78	285.00
IUUC-Eca-033418	Equus caballus	85.34	0.00e+00	1046.00
IUUC-Eeu-035088	Erinaceus europaeus	67.16	4.00e-135	475.00
IUUC-Fca-035471	Felis catus	87.39	0.00e+00	1067.00
IUUC-Fal-036908	Ficedula albicollis	47.78	1.00e-154	540.00
IUUC-Gmo-038672	Gadus morhua	37.87	8.00e-68	251.00
IUUC-Gga-040422	Gallus gallus	51.57	0.00e+00	668.00
IUUC-Gac-042448	Gasterosteus aculeatus	40.99	7.00e-142	497.00
IUUC-Ggo-045567	Gorilla gorilla	83.69	0.00e+00	1053.00
IUUC-Hsa-046857	Homo sapiens	86.28	0.00e+00	1079.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	84.27	0.00e+00	798.00
IUUC-Lch-050496	Latimeria chalumnae	55.59	0.00e+00	718.00
IUUC-Loc-052759	Lepisosteus oculatus	54.50	0.00e+00	687.00
IUUC-Laf-053515	Loxodonta africana	80.24	0.00e+00	1044.00
IUUC-Mcc-054741	Macaca mulatta	85.65	0.00e+00	1076.00
IUUC-Meu-056698	Macropus eugenii	79.86	4.00e-139	488.00
IUUC-Mga-059689	Meleagris gallopavo	51.87	0.00e+00	677.00
IUUC-Mmr-061641	Microcebus murinus	71.54	0.00e+00	826.00
IUUC-Mdo-061968	Monodelphis domestica	65.38	0.00e+00	883.00
IUUC-Mmu-063908	Mus musculus	76.06	0.00e+00	930.00
IUUC-Mpu-065957	Mustela putorius furo	85.21	0.00e+00	1061.00
IUUC-Mlu-067454	Myotis lucifugus	81.68	0.00e+00	1051.00
IUUC-Nle-069312	Nomascus leucogenys	85.65	0.00e+00	1100.00
IUUC-Opr-070363	Ochotona princeps	70.60	0.00e+00	850.00
IUUC-Ont-072322	Oreochromis niloticus	41.04	1.00e-138	486.00
IUUC-Oan-073666	Ornithorhynchus anatinus	64.87	0.00e+00	843.00
IUUC-Ocu-074719	Oryctolagus cuniculus	83.38	0.00e+00	1108.00
IUUC-Ola-087351	Oryzias latipes	44.52	8.00e-75	273.00
IUUC-Olu-087835	Ostreococcus lucimarinus	28.82	3.00e-38	152.00
IUUC-Oga-088476	Otolemur garnettii	70.50	0.00e+00	892.00
IUUC-Oar-089261	Ovis aries	90.87	0.00e+00	1119.00
IUUC-Ptr-091329	Pan troglodytes	36.21	1.00e-59	224.00
IUUC-Pan-091774	Papio anubis	86.56	0.00e+00	1093.00
IUUC-Psi-093526	Pelodiscus sinensis	60.72	0.00e+00	783.00
IUUC-Pma-094755	Petromyzon marinus	46.04	1.00e-66	245.00
IUUC-Ppa-095355	Physcomitrella patens	48.41	3.00e-41	162.00
IUUC-Pfo-096510	Poecilia formosa	38.72	1.00e-123	436.00
IUUC-Pab-098218	Pongo abelii	86.27	0.00e+00	1055.00
IUUC-Pca-100350	Procavia capensis	32.50	6.00e-51	195.00
IUUC-Pva-102551	Pteropus vampyrus	84.38	0.00e+00	655.00
IUUC-Rno-105674	Rattus norvegicus	75.76	0.00e+00	993.00
IUUC-Sha-107552	Sarcophilus harrisii	66.26	0.00e+00	879.00
IUUC-Smo-109353	Selaginella moellendorffii	40.91	4.00e-64	237.00
IUUC-Sar-113136	Sorex araneus	70.81	0.00e+00	846.00
IUUC-Tgu-117141	Taeniopygia guttata	48.36	3.00e-162	564.00
IUUC-Tru-118061	Takifugu rubripes	34.32	3.00e-52	199.00
IUUC-Tni-119670	Tetraodon nigroviridis	34.20	2.00e-98	353.00
IUUC-Tbe-127913	Tupaia belangeri	75.46	0.00e+00	894.00
IUUC-Ttr-128515	Tursiops truncatus	81.78	0.00e+00	985.00
IUUC-Vpa-130560	Vicugna pacos	77.92	5.00e-180	624.00
IUUC-Xtr-131755	Xenopus tropicalis	54.37	0.00e+00	712.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence