iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040034

Ensembl Protein ID

GGTG_04099T0

UniProt Accession

J3NS52; J3NS52_GAGT3

Genbank Protein ID

EJT79008.1

Protein Name

Ubiquitin-60S ribosomal protein L40

Genbank Nucleotide ID

ADBI01000345

Gene Name

GGTG_04099

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_04099	GGTG_04099T0	GGTG_04099T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	3.60e-41	138.8	36	111
ULD/UDP/UBQ/UBQ_PIM	1.80e-28	97.9	36	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k ++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 36   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 111
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 36   MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 108
           99********************************************************************986 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MVATKGPRDQ RNLRWDFSRL FIDDQNKSPF TKTAKMQIFV KTLTGKTITL EVESSDTIDN 60
VKSKIQDKEG IPPDQQRLIF AGKQLEDGRT LSDYNIQKES TLHLVLRLRG GIIEPSLKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCGCGA CCAAGGGTCC ACGTGATCAG AGGGTTGGTT GGAGTGGGGC GCGGACATAT 60
TGCCTGACAA ATGGGTCCGG CACACATCAA TTTGCTTAAC CCACCAGAAT TTGAGGTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001006	Aegilops tauschii	58.94	4.00e-46	175.00
IUUC-Aml-001246	Ailuropoda melanoleuca	90.62	1.00e-66	242.00
IUUC-Atr-003081	Amborella trichopoda	72.09	1.00e-44	170.00
IUUC-Apl-004069	Anas platyrhynchos	87.95	4.00e-41	157.00
IUUC-Ath-007098	Arabidopsis thaliana	90.62	3.00e-66	241.00
IUUC-Ago-007932	Ashbya gossypii	96.09	8.00e-71	256.00
IUUC-Acl-008350	Aspergillus clavatus	88.72	2.00e-66	241.00
IUUC-Afl-008554	Aspergillus flavus	93.94	4.00e-71	258.00
IUUC-Afu-008984	Aspergillus fumigatus	86.62	1.00e-69	253.00
IUUC-Ang-009609	Aspergillus niger	95.31	6.00e-70	253.00
IUUC-Aor-009991	Aspergillus oryzae	93.70	4.00e-68	248.00
IUUC-Ate-010252	Aspergillus terreus	95.20	9.00e-69	252.00
IUUC-Ame-010785	Astyanax mexicanus	90.43	1.00e-48	182.00
IUUC-Bgr-012115	Blumeria graminis	94.40	3.00e-68	248.00
IUUC-Bta-013360	Bos taurus	90.62	1.00e-66	242.00
IUUC-Bci-013851	Botrytis cinerea	96.88	2.00e-71	258.00
IUUC-Bdi-014499	Brachypodium distachyon	90.62	9.00e-67	243.00
IUUC-Bol-015961	Brassica oleracea	91.41	7.00e-67	243.00
IUUC-Cel-018677	Caenorhabditis elegans	89.06	4.00e-66	241.00
IUUC-Cja-019572	Callithrix jacchus	90.62	1.00e-66	242.00
IUUC-Cfa-020339	Canis familiaris	90.62	1.00e-66	242.00
IUUC-Cpo-021534	Cavia porcellus	90.62	1.00e-66	242.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	90.62	3.00e-66	241.00
IUUC-Csa-023398	Chlorocebus sabaeus	90.62	1.00e-66	242.00
IUUC-Cin-025266	Ciona intestinalis	90.62	8.00e-67	243.00
IUUC-Csv-026105	Ciona savignyi	90.55	1.00e-66	243.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	100.00	2.00e-70	258.00
IUUC-Cne-026913	Cryptococcus neoformans	94.53	1.00e-69	253.00
IUUC-Cme-027344	Cyanidioschyzon merolae	90.32	2.00e-45	172.00
IUUC-Dre-028761	Danio rerio	90.62	2.00e-66	242.00
IUUC-Dno-028899	Dasypus novemcinctus	90.62	6.00e-66	240.00
IUUC-Dme-031588	Drosophila melanogaster	92.19	2.00e-67	245.00
IUUC-Ete-033120	Echinops telfairi	90.62	1.00e-66	242.00
IUUC-Eca-033787	Equus caballus	90.62	1.00e-66	242.00
IUUC-Fca-035725	Felis catus	90.62	1.00e-66	242.00
IUUC-Fox-037870	Fusarium oxysporum	100.00	9.00e-73	263.00
IUUC-Fso-038461	Fusarium solani	100.00	1.00e-42	162.00
IUUC-Gmo-039163	Gadus morhua	91.54	5.00e-68	247.00
IUUC-Gga-040909	Gallus gallus	89.06	7.00e-66	240.00
IUUC-Gac-041640	Gasterosteus aculeatus	90.77	2.00e-67	245.00
IUUC-Gma-043254	Glycine max	91.47	1.00e-67	246.00
IUUC-Ggo-045411	Gorilla gorilla	90.62	1.00e-66	242.00
IUUC-Hsa-046609	Homo sapiens	71.53	6.00e-51	191.00
IUUC-Hvu-047579	Hordeum vulgare	69.85	2.00e-51	192.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	85.61	1.00e-68	250.00
IUUC-Kpa-049279	Komagataella pastoris	96.09	1.00e-70	256.00
IUUC-Lch-049971	Latimeria chalumnae	87.05	2.00e-69	253.00
IUUC-Lpe-051472	Leersia perrieri	79.41	3.00e-53	201.00
IUUC-Loc-052117	Lepisosteus oculatus	81.88	2.00e-69	252.00
IUUC-Lma-053049	Leptosphaeria maculans	97.66	1.00e-71	259.00
IUUC-Laf-054284	Loxodonta africana	85.61	1.00e-68	251.00
IUUC-Mcc-055710	Macaca mulatta	84.40	6.00e-67	245.00
IUUC-Meu-056411	Macropus eugenii	90.62	1.00e-66	242.00
IUUC-Mor-057008	Magnaporthe oryzae	98.44	1.00e-71	259.00
IUUC-Mpo-057360	Magnaporthe poae	98.44	5.00e-72	260.00
IUUC-Mtr-058437	Medicago truncatula	90.62	5.00e-66	241.00
IUUC-Mla-059080	Melampsora laricipopulina	92.16	6.00e-52	193.00
IUUC-Mmr-061335	Microcebus murinus	85.16	4.00e-60	221.00
IUUC-Mdo-062752	Monodelphis domestica	90.62	1.00e-66	242.00
IUUC-Mmu-063548	Mus musculus	85.61	2.00e-68	249.00
IUUC-Mac-065626	Musa acuminata	90.62	2.00e-66	242.00
IUUC-Mpu-066513	Mustela putorius furo	90.62	1.00e-66	242.00
IUUC-Mlu-068010	Myotis lucifugus	89.06	3.00e-65	238.00
IUUC-Nfi-068358	Neosartorya fischeri	95.24	1.00e-68	249.00
IUUC-Ncr-068799	Neurospora crassa	99.22	4.00e-72	261.00
IUUC-Opr-070655	Ochotona princeps	90.62	1.00e-66	242.00
IUUC-Ont-072180	Oreochromis niloticus	90.62	3.00e-66	241.00
IUUC-Oan-073196	Ornithorhynchus anatinus	90.62	1.00e-66	242.00
IUUC-Oba-075092	Oryza barthii	91.41	4.00e-67	244.00
IUUC-Obr-076156	Oryza brachyantha	91.47	2.00e-67	246.00
IUUC-Ogl-077471	Oryza glaberrima	91.41	4.00e-67	244.00
IUUC-Ogu-078259	Oryza glumaepatula	91.41	4.00e-67	244.00
IUUC-Oin-079901	Oryza indica	91.41	4.00e-67	244.00
IUUC-Ome-081343	Oryza meridionalis	91.41	4.00e-67	244.00
IUUC-Oni-082301	Oryza nivara	75.22	2.00e-34	136.00
IUUC-Opu-083839	Oryza punctata	63.77	6.00e-38	150.00
IUUC-Oru-085252	Oryza rufipogon	91.41	4.00e-67	244.00
IUUC-Osa-085747	Oryza sativa	78.36	5.00e-52	194.00
IUUC-Ola-086333	Oryzias latipes	91.41	4.00e-67	244.00
IUUC-Olu-087819	Ostreococcus lucimarinus	85.94	3.00e-63	231.00
IUUC-Oga-088027	Otolemur garnettii	90.62	1.00e-66	242.00
IUUC-Oar-090419	Ovis aries	90.62	1.00e-66	242.00
IUUC-Ptr-091593	Pan troglodytes	90.62	1.00e-66	242.00
IUUC-Pan-091806	Papio anubis	87.50	6.00e-63	230.00
IUUC-Psi-093654	Pelodiscus sinensis	90.62	1.00e-66	242.00
IUUC-Ppa-095174	Physcomitrella patens	90.62	2.00e-66	242.00
IUUC-Pfo-096492	Poecilia formosa	91.41	6.00e-67	243.00
IUUC-Pab-098004	Pongo abelii	90.62	1.00e-66	242.00
IUUC-Pop-098929	Populus trichocarpa	90.62	2.00e-66	242.00
IUUC-Ppe-101497	Prunus persica	91.41	7.00e-67	243.00
IUUC-Pva-102945	Pteropus vampyrus	90.62	1.00e-66	242.00
IUUC-Pgr-103268	Puccinia graminis	93.02	8.00e-70	254.00
IUUC-Ptt-103804	Puccinia triticina	90.65	4.00e-55	204.00
IUUC-Pte-104101	Pyrenophora teres	85.81	4.00e-72	261.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	96.09	2.00e-70	255.00
IUUC-Rno-105290	Rattus norvegicus	90.62	1.00e-66	242.00
IUUC-Sce-106249	Saccharomyces cerevisiae	97.66	2.00e-71	259.00
IUUC-Sha-106570	Sarcophilus harrisii	90.62	1.00e-66	242.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	97.66	1.00e-71	259.00
IUUC-Spo-108045	Schizosaccharomyces pombe	96.88	6.00e-71	257.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	97.66	1.00e-71	259.00
IUUC-Sit-110085	Setaria italica	86.26	2.00e-66	243.00
IUUC-Sly-111884	Solanum lycopersicum	90.62	2.00e-66	242.00
IUUC-Stu-112385	Solanum tuberosum	90.08	1.00e-62	229.00
IUUC-Sar-112942	Sorex araneus	89.84	3.00e-66	241.00
IUUC-Sbi-114790	Sorghum bicolor	90.62	2.00e-66	242.00
IUUC-Sre-114908	Sporisorium reilianum	94.53	2.00e-69	252.00
IUUC-Ssc-116417	Sus scrofa	90.62	1.00e-66	242.00
IUUC-Tru-117557	Takifugu rubripes	91.41	5.00e-67	244.00
IUUC-Tni-119715	Tetraodon nigroviridis	91.41	5.00e-67	244.00
IUUC-Tca-121404	Theobroma cacao	91.41	7.00e-67	244.00
IUUC-Tvi-122611	Trichoderma virens	98.44	4.00e-72	261.00
IUUC-Tae-123019	Triticum aestivum	73.89	8.00e-62	227.00
IUUC-Tur-126527	Triticum urartu	90.62	9.00e-67	243.00
IUUC-Tme-127138	Tuber melanosporum	94.70	2.00e-70	256.00
IUUC-Tbe-127851	Tupaia belangeri	96.05	4.00e-39	150.00
IUUC-Ttr-128939	Tursiops truncatus	90.62	1.00e-66	242.00
IUUC-Uma-129619	Ustilago maydis	94.53	2.00e-69	252.00
IUUC-Vda-129775	Verticillium dahliae	96.83	2.00e-69	252.00
IUUC-Vvi-131414	Vitis vinifera	91.41	7.00e-67	243.00
IUUC-Xtr-131921	Xenopus tropicalis	90.62	1.00e-66	242.00
IUUC-Xma-134071	Xiphophorus maculatus	91.41	6.00e-67	243.00
IUUC-Yli-134671	Yarrowia lipolytica	96.88	6.00e-71	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence