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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105008
Ensembl Protein ID ENSRNOP00000001319.7
UniProt Accession D3ZXP7; D3ZXP7_RAT
Genbank Protein ID ENSRNOP00000001319
Protein Name Actin-related protein 2/3 complex subunit 1A
Genbank Nucleotide ID AABR07035364
Gene Name Arpc1a
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000000996.7 ENSRNOT00000076021.1 ENSRNOP00000068218.1
ENSRNOG00000000996.7 ENSRNOT00000001319.7 ENSRNOP00000001319.7
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFACRAID2
Post-translational Modifications (PTMs)
CPLM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.60e-11 43.7 51 82
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H++ +t++++ +  +++v+++ D + +vW+ +
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQK 82
           9999*******6669**************955 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSLHQFLLEP ITCHAWNRDR TQIALSPNNH EVHIYKKNGS QWTKAHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGIWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105008|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTCCTCCGTC CGCGCCCGCC GGAGCCTGTT CGCGTCGACT GACCAGAGTC CGCGAATCGT 60
TCGCTCCGGA CCTCCCGACC TCCCCTACCC CAGGTAAGGA GCTGCAGGGC CGAGAGTCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105008|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0036195--C:muscle cell projection membrane
GO:0034314--P:Arp2/3 complex-mediated actin nucleation
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002044 Ailuropoda melanoleuca 98.78 0.00e+00 647.00
IUUC-Atr-002844 Amborella trichopoda 51.15 3.00e-55 208.00
IUUC-Apl-003325 Anas platyrhynchos 93.88 0.00e+00 652.00
IUUC-Aca-004736 Anolis carolinensis 93.58 0.00e+00 649.00
IUUC-Afl-008485 Aspergillus flavus 48.80 4.00e-86 312.00
IUUC-Afu-008780 Aspergillus fumigatus 48.19 2.00e-87 315.00
IUUC-Ani-009417 Aspergillus nidulans 48.94 3.00e-87 315.00
IUUC-Ang-009543 Aspergillus niger 49.24 2.00e-87 315.00
IUUC-Aor-010234 Aspergillus oryzae 47.73 1.00e-83 303.00
IUUC-Ate-010386 Aspergillus terreus 48.64 1.00e-88 319.00
IUUC-Ame-011852 Astyanax mexicanus 89.30 0.00e+00 625.00
IUUC-Bta-012530 Bos taurus 98.47 0.00e+00 645.00
IUUC-Cel-018122 Caenorhabditis elegans 59.57 5.00e-107 380.00
IUUC-Cja-019362 Callithrix jacchus 99.08 0.00e+00 648.00
IUUC-Cfa-020167 Canis familiaris 98.78 0.00e+00 648.00
IUUC-Cpo-021933 Cavia porcellus 98.78 0.00e+00 649.00
IUUC-Cho-024449 Choloepus hoffmanni 70.05 3.00e-71 262.00
IUUC-Cin-025186 Ciona intestinalis 58.23 7.00e-109 387.00
IUUC-Cgl-026732 Colletotrichum gloeosporioides 45.02 9.00e-81 293.00
IUUC-Dre-028057 Danio rerio 88.69 2.00e-179 621.00
IUUC-Dno-029092 Dasypus novemcinctus 98.47 0.00e+00 640.00
IUUC-Dor-030391 Dipodomys ordii 97.55 0.00e+00 639.00
IUUC-Dme-031907 Drosophila melanogaster 60.68 5.00e-117 414.00
IUUC-Eca-034074 Equus caballus 98.78 0.00e+00 647.00
IUUC-Eeu-035041 Erinaceus europaeus 80.61 6.00e-68 251.00
IUUC-Fca-036154 Felis catus 98.78 0.00e+00 647.00
IUUC-Fal-037279 Ficedula albicollis 93.88 0.00e+00 650.00
IUUC-Fox-037842 Fusarium oxysporum 47.13 5.00e-82 297.00
IUUC-Gmo-039673 Gadus morhua 86.24 3.00e-160 557.00
IUUC-Ggr-039762 Gaeumannomyces graminis 45.78 2.00e-81 295.00
IUUC-Gga-040189 Gallus gallus 94.80 0.00e+00 655.00
IUUC-Gac-042531 Gasterosteus aculeatus 87.16 1.00e-162 565.00
IUUC-Hsa-046309 Homo sapiens 98.78 0.00e+00 647.00
IUUC-Itr-047864 Ictidomys tridecemlineatus 98.78 0.00e+00 647.00
IUUC-Lch-050427 Latimeria chalumnae 88.72 4.00e-178 617.00
IUUC-Loc-052532 Lepisosteus oculatus 90.27 8.00e-174 602.00
IUUC-Lma-053109 Leptosphaeria maculans 46.99 5.00e-82 297.00
IUUC-Laf-054271 Loxodonta africana 98.47 0.00e+00 646.00
IUUC-Mcc-054857 Macaca mulatta 98.78 0.00e+00 644.00
IUUC-Meu-056540 Macropus eugenii 91.48 2.00e-153 534.00
IUUC-Mga-059327 Meleagris gallopavo 94.80 0.00e+00 655.00
IUUC-Mmr-060765 Microcebus murinus 98.78 0.00e+00 647.00
IUUC-Mdo-062326 Monodelphis domestica 95.41 0.00e+00 630.00
IUUC-Mmu-063819 Mus musculus 99.69 0.00e+00 649.00
IUUC-Mlu-067184 Myotis lucifugus 98.47 0.00e+00 644.00
IUUC-Nfi-068383 Neosartorya fischeri 48.19 3.00e-87 315.00
IUUC-Ncr-068777 Neurospora crassa 44.35 4.00e-81 294.00
IUUC-Nle-069900 Nomascus leucogenys 98.78 0.00e+00 647.00
IUUC-Opr-070386 Ochotona princeps 88.07 6.00e-161 560.00
IUUC-Ont-071283 Oreochromis niloticus 87.77 1.00e-163 568.00
IUUC-Oan-073139 Ornithorhynchus anatinus 94.50 2.00e-180 625.00
IUUC-Ocu-074340 Oryctolagus cuniculus 98.78 0.00e+00 647.00
IUUC-Ola-087274 Oryzias latipes 87.50 8.00e-162 563.00
IUUC-Oga-088016 Otolemur garnettii 98.47 0.00e+00 645.00
IUUC-Oar-089455 Ovis aries 98.47 0.00e+00 644.00
IUUC-Ptr-091548 Pan troglodytes 98.78 0.00e+00 647.00
IUUC-Psi-093767 Pelodiscus sinensis 93.88 0.00e+00 650.00
IUUC-Pfo-097107 Poecilia formosa 87.46 3.00e-162 564.00
IUUC-Pva-102908 Pteropus vampyrus 96.39 1.00e-160 558.00
IUUC-Pte-104384 Pyrenophora teres 47.73 1.00e-84 306.00
IUUC-Pyt-104686 Pyrenophora triticirepentis 47.73 2.00e-84 305.00
IUUC-Sce-106411 Saccharomyces cerevisiae 41.30 2.00e-62 233.00
IUUC-Sha-106691 Sarcophilus harrisii 95.72 0.00e+00 633.00
IUUC-Sja-107792 Schizosaccharomyces japonicus 47.49 2.00e-83 302.00
IUUC-Spo-108053 Schizosaccharomyces pombe 46.38 2.00e-84 305.00
IUUC-Sar-113599 Sorex araneus 83.18 1.00e-150 525.00
IUUC-Sre-115090 Sporisorium reilianum 56.61 8.00e-97 347.00
IUUC-Ssc-115851 Sus scrofa 98.47 0.00e+00 645.00
IUUC-Tgu-116701 Taeniopygia guttata 93.88 0.00e+00 650.00
IUUC-Tru-117603 Takifugu rubripes 86.19 2.00e-164 571.00
IUUC-Tsy-119515 Tarsius syrichta 88.89 3.00e-74 271.00
IUUC-Tni-119844 Tetraodon nigroviridis 88.99 3.00e-163 567.00
IUUC-Tre-122045 Trichoderma reesei 45.92 2.00e-80 292.00
IUUC-Tvi-122523 Trichoderma virens 45.92 5.00e-80 291.00
IUUC-Tbe-127321 Tupaia belangeri 99.08 0.00e+00 647.00
IUUC-Ttr-128178 Tursiops truncatus 97.70 2.00e-170 591.00
IUUC-Uma-129423 Ustilago maydis 56.61 1.00e-96 346.00
IUUC-Vda-129706 Verticillium dahliae 46.41 8.00e-82 296.00
IUUC-Xtr-132735 Xenopus tropicalis 89.63 5.00e-172 596.00
IUUC-Xma-133435 Xiphophorus maculatus 87.46 3.00e-162 564.00
Created Date 25-Jun-2017

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