iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131323

UUCD1 version

UUC-ViV-00227

Ensembl Protein ID

VIT_08s0056g00440.t01

UniProt Accession

F6HMS9; F6HMS9_VITVI

Genbank Protein ID

CCB55954.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595995

Gene Name

VIT_08s0056g00440

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0056g00440	VIT_08s0056g00440.t01	VIT_08s0056g00440.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-09	36.9	401	439

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e +   p++l+C+H+f++dC+  w        +e +CPlCr
   Q: 401  CAICQEKMHA-PILLRCKHIFCEDCVSEW------FERERTCPLCR 439
           ********99.999***************......9*********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEAPGGNYRG SSEIGNGNSR RYGMQLSASN IIQAPLSALL EYSGLLRGRS SHQETESLIY 60
GSGFRDRVEE SAPVSNGGEV SIRIIGAGEQ ENERVGAGLA SLAVGPVRDN EASVQQIAGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGGAACGA CGCGTTTTGG ACAGGGTCGT CGTGAGCGTG GGGTTCTGAA ATAGTGGATC 60
GGTTTGGGGT TTTGGTGGGA TGAGTAATTT GAAGAACAGC GACAAGGGGT TTTGTTTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

vvi:100250131

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000709	Aegilops tauschii	78.79	6.00e-130	456.00
IUUC-Aml-002361	Ailuropoda melanoleuca	28.22	3.00e-40	158.00
IUUC-Apl-003875	Anas platyrhynchos	31.04	1.00e-37	149.00
IUUC-Aca-004325	Anolis carolinensis	32.53	4.00e-33	134.00
IUUC-Aly-005949	Arabidopsis lyrata	69.83	3.00e-179	620.00
IUUC-Ath-007582	Arabidopsis thaliana	68.47	7.00e-178	615.00
IUUC-Ame-011821	Astyanax mexicanus	30.97	3.00e-42	165.00
IUUC-Bta-012475	Bos taurus	30.27	1.00e-39	156.00
IUUC-Bdi-014696	Brachypodium distachyon	85.08	5.00e-158	549.00
IUUC-Bol-015956	Brassica oleracea	65.19	8.00e-168	582.00
IUUC-Bra-016928	Brassica rapa	67.71	1.00e-172	598.00
IUUC-Cel-018190	Caenorhabditis elegans	22.64	2.00e-17	82.40
IUUC-Cja-019920	Callithrix jacchus	28.83	7.00e-41	160.00
IUUC-Cfa-020715	Canis familiaris	30.27	1.00e-39	156.00
IUUC-Cpo-021829	Cavia porcellus	28.53	1.00e-39	156.00
IUUC-Cre-022592	Chlamydomonas reinhardtii	46.07	2.00e-20	92.40
IUUC-Csa-023156	Chlorocebus sabaeus	29.93	2.00e-37	149.00
IUUC-Cho-025100	Choloepus hoffmanni	29.28	1.00e-40	159.00
IUUC-Dre-027857	Danio rerio	29.59	7.00e-40	157.00
IUUC-Dno-030046	Dasypus novemcinctus	28.97	8.00e-40	157.00
IUUC-Dse-031550	Dothistroma septosporum	40.54	1.00e-10	59.30
IUUC-Dme-031681	Drosophila melanogaster	35.38	6.00e-30	124.00
IUUC-Ete-032456	Echinops telfairi	26.55	1.00e-31	129.00
IUUC-Eca-033852	Equus caballus	29.59	8.00e-39	154.00
IUUC-Fca-036281	Felis catus	28.71	9.00e-40	157.00
IUUC-Fal-037647	Ficedula albicollis	33.45	1.00e-39	155.00
IUUC-Gmo-038501	Gadus morhua	27.41	6.00e-25	107.00
IUUC-Gga-040867	Gallus gallus	30.72	9.00e-44	170.00
IUUC-Gac-042530	Gasterosteus aculeatus	26.90	3.00e-27	115.00
IUUC-Gma-043596	Glycine max	73.93	1.00e-160	558.00
IUUC-Ggo-045577	Gorilla gorilla	28.14	9.00e-37	147.00
IUUC-Hsa-046314	Homo sapiens	29.02	2.00e-40	159.00
IUUC-Hvu-047080	Hordeum vulgare	82.47	6.00e-132	461.00
IUUC-Itr-048888	Ictidomys tridecemlineatus	29.06	6.00e-37	147.00
IUUC-Lch-049901	Latimeria chalumnae	30.84	1.00e-39	156.00
IUUC-Lpe-051163	Leersia perrieri	83.05	3.00e-155	540.00
IUUC-Loc-051924	Lepisosteus oculatus	30.19	9.00e-42	163.00
IUUC-Laf-053448	Loxodonta africana	29.01	2.00e-39	155.00
IUUC-Mcc-054949	Macaca mulatta	30.27	4.00e-39	154.00
IUUC-Meu-056056	Macropus eugenii	32.18	3.00e-30	125.00
IUUC-Mtr-058255	Medicago truncatula	75.23	2.00e-163	567.00
IUUC-Mga-059843	Meleagris gallopavo	30.72	9.00e-44	170.00
IUUC-Mmr-061235	Microcebus murinus	28.87	6.00e-41	160.00
IUUC-Mdo-062268	Monodelphis domestica	30.27	6.00e-40	157.00
IUUC-Mmu-063985	Mus musculus	28.35	2.00e-39	155.00
IUUC-Mac-065421	Musa acuminata	71.66	3.00e-168	583.00
IUUC-Mpu-066469	Mustela putorius furo	30.27	9.00e-40	157.00
IUUC-Mlu-067707	Myotis lucifugus	29.93	5.00e-39	154.00
IUUC-Nle-069009	Nomascus leucogenys	28.75	7.00e-38	150.00
IUUC-Ont-072228	Oreochromis niloticus	29.93	1.00e-40	159.00
IUUC-Oan-073490	Ornithorhynchus anatinus	32.35	6.00e-40	157.00
IUUC-Ocu-074346	Oryctolagus cuniculus	30.41	7.00e-37	147.00
IUUC-Oba-075245	Oryza barthii	83.67	2.00e-131	460.00
IUUC-Obr-076737	Oryza brachyantha	87.25	8.00e-125	438.00
IUUC-Ogl-077684	Oryza glaberrima	84.41	1.00e-156	545.00
IUUC-Ogu-078859	Oryza glumaepatula	84.41	9.00e-157	545.00
IUUC-Oin-079424	Oryza indica	84.41	3.00e-156	543.00
IUUC-Ome-081614	Oryza meridionalis	86.78	5.00e-149	520.00
IUUC-Oni-082296	Oryza nivara	86.78	2.00e-148	518.00
IUUC-Opu-083546	Oryza punctata	86.78	1.00e-148	518.00
IUUC-Oru-085138	Oryza rufipogon	82.58	2.00e-149	521.00
IUUC-Osa-085729	Oryza sativa	84.41	1.00e-156	545.00
IUUC-Ola-086621	Oryzias latipes	29.93	1.00e-38	152.00
IUUC-Olu-087799	Ostreococcus lucimarinus	45.62	7.00e-37	145.00
IUUC-Oga-087950	Otolemur garnettii	28.72	2.00e-34	139.00
IUUC-Oar-089816	Ovis aries	27.95	4.00e-37	148.00
IUUC-Ptr-091587	Pan troglodytes	29.02	3.00e-40	158.00
IUUC-Pan-092883	Papio anubis	30.27	4.00e-39	154.00
IUUC-Psi-093766	Pelodiscus sinensis	31.03	1.00e-36	145.00
IUUC-Ppa-095990	Physcomitrella patens	65.33	4.00e-133	466.00
IUUC-Pfo-096621	Poecilia formosa	29.49	2.00e-35	142.00
IUUC-Pab-098474	Pongo abelii	29.57	7.00e-38	150.00
IUUC-Pop-100001	Populus trichocarpa	90.53	2.00e-147	514.00
IUUC-Pca-100148	Procavia capensis	28.22	6.00e-40	157.00
IUUC-Ppe-101186	Prunus persica	79.92	0.00e+00	672.00
IUUC-Pva-102165	Pteropus vampyrus	30.27	2.00e-39	155.00
IUUC-Rno-105220	Rattus norvegicus	28.35	6.00e-39	154.00
IUUC-Sha-107537	Sarcophilus harrisii	28.71	1.00e-39	156.00
IUUC-Smo-109495	Selaginella moellendorffii	55.97	2.00e-129	454.00
IUUC-Sit-110475	Setaria italica	85.42	2.00e-146	511.00
IUUC-Sly-111873	Solanum lycopersicum	73.72	2.00e-176	610.00
IUUC-Stu-112302	Solanum tuberosum	73.72	1.00e-174	605.00
IUUC-Sbi-114889	Sorghum bicolor	63.91	1.00e-158	551.00
IUUC-Ssc-115358	Sus scrofa	28.71	9.00e-40	156.00
IUUC-Tgu-117409	Taeniopygia guttata	28.86	7.00e-32	130.00
IUUC-Tru-117949	Takifugu rubripes	29.93	5.00e-41	160.00
IUUC-Tsy-118995	Tarsius syrichta	30.07	5.00e-34	137.00
IUUC-Tni-120152	Tetraodon nigroviridis	30.61	3.00e-38	151.00
IUUC-Tca-121155	Theobroma cacao	75.05	0.00e+00	665.00
IUUC-Tae-124755	Triticum aestivum	65.31	5.00e-165	573.00
IUUC-Tur-126177	Triticum urartu	77.58	5.00e-135	472.00
IUUC-Tme-126916	Tuber melanosporum	44.44	1.00e-08	54.70
IUUC-Ttr-128557	Tursiops truncatus	30.27	2.00e-39	155.00
IUUC-Xtr-132785	Xenopus tropicalis	29.59	5.00e-35	140.00
IUUC-Xma-133737	Xiphophorus maculatus	30.27	2.00e-40	159.00
IUUC-Yli-134581	Yarrowia lipolytica	41.54	1.00e-09	56.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence