iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002452

Ensembl Protein ID

ERM98671

UniProt Accession

W1NPM0; W1NPM0_AMBTC

Genbank Protein ID

ERM98671.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

KI395307

Gene Name

AMTR_s00109p00120700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00109p00120700	ERM98671	ERM98671

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	5.30e-16	59.0	230	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 4    vkvsykgeirsfaldlekpgkfedLlkavrt.lt.........................elknsevalkYeDedGDlvtlksDedldkavsllaskksllr 78
           vkvs++g+++++++dl+ ++++ +L +a+++ +                           l++se+ l+YeD+dGD++ l++D+++d+++       s+ r
   Q: 230  VKVSMDGAPYLRKVDLKTYLTYTELSSALEKmFScftigqygphgapgrdgltesrlmdLLNGSEYVLTYEDKDGDWM-LVGDVPWDMFIG------SCRR 323
           9******************************7225679********************99999***************.************......**** PP
   S: 79   lliqk 83
           l+i+k
   Q: 324  LRIMK 328
           ***98 PP

Organism

Amborella trichopoda

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTPPLGHVDE VPGDCSLKEH DYIGLSEVSS MERTSLSKEE NGNSLNLKET ELRLGLPGSG 60
SPDRKKPELC LLGPLRPEEK GIFPLVSPKN VVSGAKRGIS DVIDGVKKGV ASDGKWAFNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCCCC CTCTTGGCCA TGTAGATGAG GTACCAGGTG ACTGTAGCCT CAAGGAGCAT 60
GATTACATAG GCTTATCAGA AGTTTCATCA ATGGAAAGAA CTTCTCTTTC AAAGGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

atr:18426688

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003220	Anas platyrhynchos	29.31	2.00e-02	32.00
IUUC-Aca-004830	Anolis carolinensis	29.31	2.30e-02	31.60
IUUC-Aly-005481	Arabidopsis lyrata	50.00	1.00e-80	291.00
IUUC-Ath-007607	Arabidopsis thaliana	50.00	2.00e-80	291.00
IUUC-Bta-012950	Bos taurus	29.31	1.80e-02	32.70
IUUC-Cja-019530	Callithrix jacchus	29.31	1.40e-02	33.10
IUUC-Cfa-020019	Canis familiaris	29.31	2.00e-02	32.30
IUUC-Cpo-021749	Cavia porcellus	29.31	1.70e-02	32.70
IUUC-Csa-023127	Chlorocebus sabaeus	29.31	1.10e-02	32.70
IUUC-Dno-029244	Dasypus novemcinctus	29.31	1.50e-02	32.70
IUUC-Dor-030191	Dipodomys ordii	29.31	1.50e-02	32.70
IUUC-Dse-031353	Dothistroma septosporum	42.31	4.50e+00	25.80
IUUC-Eca-033719	Equus caballus	29.31	1.70e-02	32.70
IUUC-Eeu-035270	Erinaceus europaeus	29.31	1.10e-02	33.10
IUUC-Fca-035804	Felis catus	29.31	1.70e-02	32.70
IUUC-Fal-037426	Ficedula albicollis	29.31	3.50e-02	31.60
IUUC-Gga-040715	Gallus gallus	29.31	3.00e-02	32.00
IUUC-Hsa-045687	Homo sapiens	29.31	1.50e-02	32.70
IUUC-Itr-048521	Ictidomys tridecemlineatus	29.31	1.60e-02	32.70
IUUC-Lch-049822	Latimeria chalumnae	27.59	1.50e-01	29.60
IUUC-Laf-053735	Loxodonta africana	29.31	2.00e-02	32.30
IUUC-Mcc-054955	Macaca mulatta	29.31	1.50e-02	32.70
IUUC-Mmr-061160	Microcebus murinus	29.31	1.20e-02	33.10
IUUC-Mdo-062388	Monodelphis domestica	29.31	1.30e-02	33.10
IUUC-Mmu-063730	Mus musculus	29.31	1.80e-02	32.30
IUUC-Mac-064563	Musa acuminata	57.93	3.00e-96	343.00
IUUC-Mpu-065683	Mustela putorius furo	29.31	1.80e-02	32.70
IUUC-Mlu-067270	Myotis lucifugus	29.31	6.00e-03	33.90
IUUC-Nle-069491	Nomascus leucogenys	29.31	1.60e-02	32.70
IUUC-Opr-071160	Ochotona princeps	29.31	2.20e-02	32.30
IUUC-Oan-073255	Ornithorhynchus anatinus	29.31	1.40e-02	32.70
IUUC-Ome-081266	Oryza meridionalis	62.67	6.00e-53	199.00
IUUC-Opu-083799	Oryza punctata	70.83	1.00e-51	194.00
IUUC-Oga-088931	Otolemur garnettii	29.31	1.30e-02	33.10
IUUC-Oar-090035	Ovis aries	29.31	1.50e-02	32.70
IUUC-Ptr-091043	Pan troglodytes	29.31	1.50e-02	32.70
IUUC-Psi-093566	Pelodiscus sinensis	29.31	2.40e-02	32.00
IUUC-Ppa-095740	Physcomitrella patens	44.71	4.00e-33	134.00
IUUC-Pab-098182	Pongo abelii	29.31	2.00e-02	32.30
IUUC-Rno-105324	Rattus norvegicus	29.31	1.90e-02	32.30
IUUC-Sha-106837	Sarcophilus harrisii	29.31	1.40e-02	33.10
IUUC-Sly-111221	Solanum lycopersicum	51.80	5.00e-74	270.00
IUUC-Sbi-114334	Sorghum bicolor	70.19	9.00e-59	218.00
IUUC-Tgu-117454	Taeniopygia guttata	29.31	2.80e-02	32.00
IUUC-Tsy-119108	Tarsius syrichta	29.31	1.50e-02	32.70
IUUC-Tbe-127251	Tupaia belangeri	29.31	2.00e-02	32.30
IUUC-Ttr-129157	Tursiops truncatus	29.31	1.90e-02	32.30
IUUC-Xtr-132566	Xenopus tropicalis	29.31	1.80e-02	32.30
IUUC-Zma-134876	Zea mays	68.32	2.00e-57	214.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence