iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099687

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTR_0008s06100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s06100	POPTR_0008s06100.1	POPTR_0008s06100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-20	72.6	92	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           +s+ +++f   + ++++sG+   ++++WDl + +++
   Q: 92   ESILAISFsnKGsRYICSGGSGQVVRIWDLQRKRCI 127
           5789999*973359****************998886 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMNLADPSMA LLAASGGDTV KLFDVSVEPG DPCTLSYTPT PGCLVNAVKW NHTNLVVASA 60
GEDKKISLWR KNGQSMGTIP VSGTDSGDSI EESILAISFS NKGSRYICSG GSGQVVRIWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAAATAC AAATGCAACG CAATAATAAT ACCTCTTCTA CACTTACATT CAAATTTATT 60
TTTTTAATAA CCCTCCCCTC TCTCTCTCTC TCTCTCTCCC CTTCCCATCC TTTCTAAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

pop:POPTR_0008s06100g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002397	Ailuropoda melanoleuca	32.38	9.00e-41	161.00
IUUC-Atr-002464	Amborella trichopoda	63.52	0.00e+00	880.00
IUUC-Apl-003870	Anas platyrhynchos	33.11	1.00e-40	160.00
IUUC-Aca-004925	Anolis carolinensis	31.49	4.00e-40	159.00
IUUC-Aly-005931	Arabidopsis lyrata	63.46	0.00e+00	929.00
IUUC-Ath-006681	Arabidopsis thaliana	62.45	0.00e+00	919.00
IUUC-Ame-010906	Astyanax mexicanus	30.77	8.00e-32	131.00
IUUC-Bta-013389	Bos taurus	32.10	2.00e-42	166.00
IUUC-Bol-015773	Brassica oleracea	60.61	0.00e+00	858.00
IUUC-Bra-016623	Brassica rapa	60.30	0.00e+00	835.00
IUUC-Cfa-021218	Canis familiaris	32.38	2.00e-40	160.00
IUUC-Cpo-021697	Cavia porcellus	32.24	7.00e-41	161.00
IUUC-Cho-025105	Choloepus hoffmanni	32.00	3.00e-30	126.00
IUUC-Cin-025293	Ciona intestinalis	34.48	7.00e-28	118.00
IUUC-Csv-026234	Ciona savignyi	30.00	1.00e-23	102.00
IUUC-Dre-028251	Danio rerio	35.58	4.00e-34	139.00
IUUC-Dno-029281	Dasypus novemcinctus	31.75	5.00e-39	155.00
IUUC-Ete-033113	Echinops telfairi	36.53	2.00e-38	153.00
IUUC-Eca-034230	Equus caballus	32.92	1.00e-40	160.00
IUUC-Fca-035775	Felis catus	32.69	2.00e-40	160.00
IUUC-Fal-037557	Ficedula albicollis	30.07	3.00e-33	136.00
IUUC-Gmo-038586	Gadus morhua	31.39	3.00e-30	125.00
IUUC-Gga-040153	Gallus gallus	32.55	7.00e-38	151.00
IUUC-Gac-041385	Gasterosteus aculeatus	33.12	1.00e-33	137.00
IUUC-Gma-043049	Glycine max	71.62	0.00e+00	1071.00
IUUC-Hvu-047794	Hordeum vulgare	79.50	3.00e-76	276.00
IUUC-Lch-050561	Latimeria chalumnae	26.37	3.00e-19	89.70
IUUC-Loc-052816	Lepisosteus oculatus	32.07	3.00e-29	123.00
IUUC-Laf-053880	Loxodonta africana	31.33	1.00e-36	147.00
IUUC-Meu-056141	Macropus eugenii	37.02	9.00e-39	154.00
IUUC-Mtr-058441	Medicago truncatula	69.59	0.00e+00	1006.00
IUUC-Mga-060141	Meleagris gallopavo	34.50	8.00e-35	141.00
IUUC-Mmr-061201	Microcebus murinus	31.75	1.00e-39	157.00
IUUC-Mdo-061855	Monodelphis domestica	33.22	1.00e-40	161.00
IUUC-Mmu-064342	Mus musculus	31.75	2.00e-39	157.00
IUUC-Mac-065368	Musa acuminata	60.91	0.00e+00	837.00
IUUC-Mpu-066191	Mustela putorius furo	32.06	3.00e-40	159.00
IUUC-Mlu-067310	Myotis lucifugus	32.70	7.00e-41	161.00
IUUC-Opr-070336	Ochotona princeps	36.07	3.00e-38	152.00
IUUC-Ont-071675	Oreochromis niloticus	32.90	4.00e-37	149.00
IUUC-Oan-072772	Ornithorhynchus anatinus	36.95	1.00e-38	153.00
IUUC-Ocu-074095	Oryctolagus cuniculus	31.75	7.00e-40	158.00
IUUC-Oba-075327	Oryza barthii	57.46	0.00e+00	753.00
IUUC-Obr-076119	Oryza brachyantha	56.96	0.00e+00	771.00
IUUC-Ogl-077820	Oryza glaberrima	56.89	0.00e+00	764.00
IUUC-Ogu-078679	Oryza glumaepatula	57.53	0.00e+00	752.00
IUUC-Oin-079891	Oryza indica	57.59	0.00e+00	755.00
IUUC-Olo-080414	Oryza longistaminata	57.51	0.00e+00	689.00
IUUC-Ome-081888	Oryza meridionalis	56.51	0.00e+00	731.00
IUUC-Oni-082417	Oryza nivara	57.14	0.00e+00	767.00
IUUC-Opu-083393	Oryza punctata	56.41	0.00e+00	780.00
IUUC-Oru-084698	Oryza rufipogon	57.59	0.00e+00	753.00
IUUC-Osa-086121	Oryza sativa	57.14	0.00e+00	767.00
IUUC-Ola-086806	Oryzias latipes	33.23	4.00e-36	145.00
IUUC-Oga-088622	Otolemur garnettii	32.70	5.00e-41	162.00
IUUC-Oar-090391	Ovis aries	33.65	1.00e-42	167.00
IUUC-Psi-093450	Pelodiscus sinensis	31.31	4.00e-39	155.00
IUUC-Pma-094101	Petromyzon marinus	34.95	2.00e-34	139.00
IUUC-Ppa-095986	Physcomitrella patens	57.27	4.00e-159	554.00
IUUC-Pfo-097142	Poecilia formosa	31.94	3.00e-36	145.00
IUUC-Ppe-101502	Prunus persica	76.48	0.00e+00	1095.00
IUUC-Pva-102736	Pteropus vampyrus	32.38	1.00e-40	160.00
IUUC-Rno-104977	Rattus norvegicus	32.06	5.00e-40	158.00
IUUC-Sha-107003	Sarcophilus harrisii	32.90	3.00e-41	162.00
IUUC-Smo-109328	Selaginella moellendorffii	51.98	9.00e-147	513.00
IUUC-Sly-110941	Solanum lycopersicum	67.51	0.00e+00	953.00
IUUC-Stu-112314	Solanum tuberosum	67.13	0.00e+00	929.00
IUUC-Sbi-113822	Sorghum bicolor	62.26	5.00e-119	421.00
IUUC-Ssc-116242	Sus scrofa	33.55	9.00e-41	160.00
IUUC-Tgu-116765	Taeniopygia guttata	31.88	1.00e-33	137.00
IUUC-Tru-117738	Takifugu rubripes	31.29	6.00e-36	145.00
IUUC-Tni-120871	Tetraodon nigroviridis	30.84	1.00e-36	147.00
IUUC-Tca-120965	Theobroma cacao	75.84	0.00e+00	1086.00
IUUC-Ttr-128551	Tursiops truncatus	32.53	8.00e-34	138.00
IUUC-Vpa-130324	Vicugna pacos	33.33	4.00e-42	165.00
IUUC-Vvi-131699	Vitis vinifera	78.63	0.00e+00	1134.00
IUUC-Xtr-131956	Xenopus tropicalis	33.33	6.00e-43	168.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence