iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000004146.7	ENSRNOT00000086305.1	ENSRNOP00000074983.1
ENSRNOG00000004146.7	ENSRNOT00000006067.6	ENSRNOP00000006067.6

Annotation

mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-23	80.8	633	669

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+d +++la+ +d + l++ + Dg ++v+D+r+ +l
   Q: 633  GHQDQIFSLAWsPDgKQLATVCKDGRVRVYDPRSSPL 669
           8***********999****************998776 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNRFKASKFR HMEARPSRRE AWISDIRAGT TATCGNHIKS SCSLIAFNSD RPGVLGIISL 60
EGHEENKRHV TYLGCHSVLG YDMDFKPFVD DIMQFSGAGD RTQGLWRLKS TGFAWPNVQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACCGCT TCAAGGCGTC CAAGTTTCGG CATATGGAGG CCCGGCCGTC CCGCCGAGAG 60
GTGAGCCCGG CCCGGACCTA ACTCCCTGGC TCCTGGTCCC GGATGACTGC CATTCCCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027331--CORO7
IPR015505--Coronin
IPR015048--DUF1899
IPR023302--Pept_S9A_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0016021--C:integral component of membrane
GO:0007015--P:actin filament organization
GO:0016477--P:cell migration
GO:0030010--P:establishment of cell polarity
GO:0007030--P:Golgi organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002235	Ailuropoda melanoleuca	88.41	0.00e+00	765.00
IUUC-Apl-004126	Anas platyrhynchos	49.44	2.00e-92	333.00
IUUC-Aca-005201	Anolis carolinensis	66.22	0.00e+00	796.00
IUUC-Ame-011310	Astyanax mexicanus	54.24	5.00e-76	277.00
IUUC-Bta-012843	Bos taurus	76.08	0.00e+00	1303.00
IUUC-Cel-018204	Caenorhabditis elegans	35.78	2.00e-68	254.00
IUUC-Cja-019024	Callithrix jacchus	75.16	0.00e+00	1242.00
IUUC-Cfa-020626	Canis familiaris	77.81	0.00e+00	1294.00
IUUC-Cpo-022429	Cavia porcellus	77.57	0.00e+00	1368.00
IUUC-Csa-023919	Chlorocebus sabaeus	77.19	0.00e+00	1310.00
IUUC-Cin-025202	Ciona intestinalis	46.71	4.00e-124	439.00
IUUC-Csv-026236	Ciona savignyi	40.83	3.00e-138	485.00
IUUC-Dre-028759	Danio rerio	67.52	0.00e+00	658.00
IUUC-Dno-029234	Dasypus novemcinctus	64.28	0.00e+00	930.00
IUUC-Dor-030242	Dipodomys ordii	78.90	0.00e+00	1335.00
IUUC-Dme-032156	Drosophila melanogaster	45.26	4.00e-125	442.00
IUUC-Ete-032862	Echinops telfairi	72.32	0.00e+00	1115.00
IUUC-Eca-033902	Equus caballus	75.28	0.00e+00	1238.00
IUUC-Eeu-034540	Erinaceus europaeus	59.13	6.00e-157	548.00
IUUC-Fca-036335	Felis catus	76.57	0.00e+00	1301.00
IUUC-Fal-037278	Ficedula albicollis	60.79	0.00e+00	1057.00
IUUC-Gmo-038846	Gadus morhua	66.01	1.00e-178	620.00
IUUC-Gga-041144	Gallus gallus	56.90	0.00e+00	957.00
IUUC-Gac-041680	Gasterosteus aculeatus	51.61	0.00e+00	901.00
IUUC-Ggo-045469	Gorilla gorilla	79.96	0.00e+00	644.00
IUUC-Hsa-046873	Homo sapiens	77.08	0.00e+00	1291.00
IUUC-Itr-048351	Ictidomys tridecemlineatus	79.09	0.00e+00	1351.00
IUUC-Loc-052682	Lepisosteus oculatus	62.41	0.00e+00	876.00
IUUC-Laf-053869	Loxodonta africana	64.77	0.00e+00	863.00
IUUC-Mcc-054896	Macaca mulatta	77.30	0.00e+00	1332.00
IUUC-Meu-056428	Macropus eugenii	70.02	0.00e+00	1205.00
IUUC-Mga-059389	Meleagris gallopavo	60.22	0.00e+00	1033.00
IUUC-Mvi-060231	Microbotryum violaceum	33.78	1.00e-58	221.00
IUUC-Mmr-060935	Microcebus murinus	78.10	0.00e+00	1327.00
IUUC-Mdo-062707	Monodelphis domestica	70.30	0.00e+00	1245.00
IUUC-Mmu-063976	Mus musculus	88.52	0.00e+00	1546.00
IUUC-Mpu-066441	Mustela putorius furo	88.20	0.00e+00	748.00
IUUC-Mlu-067524	Myotis lucifugus	78.25	0.00e+00	1345.00
IUUC-Opr-071099	Ochotona princeps	75.16	0.00e+00	1176.00
IUUC-Ont-071673	Oreochromis niloticus	65.61	0.00e+00	657.00
IUUC-Oan-072860	Ornithorhynchus anatinus	69.42	0.00e+00	811.00
IUUC-Ocu-074794	Oryctolagus cuniculus	75.96	0.00e+00	1258.00
IUUC-Ola-086479	Oryzias latipes	53.02	0.00e+00	957.00
IUUC-Oga-088030	Otolemur garnettii	87.86	0.00e+00	739.00
IUUC-Oar-090379	Ovis aries	69.38	0.00e+00	1083.00
IUUC-Ptr-091006	Pan troglodytes	73.22	0.00e+00	1179.00
IUUC-Pan-092428	Papio anubis	77.32	0.00e+00	1330.00
IUUC-Psi-093624	Pelodiscus sinensis	53.81	7.00e-115	407.00
IUUC-Pfo-096558	Poecilia formosa	53.23	0.00e+00	962.00
IUUC-Pab-098298	Pongo abelii	67.67	0.00e+00	1062.00
IUUC-Pca-100305	Procavia capensis	67.76	0.00e+00	827.00
IUUC-Pva-102702	Pteropus vampyrus	80.13	0.00e+00	1135.00
IUUC-Sha-106795	Sarcophilus harrisii	68.31	0.00e+00	1132.00
IUUC-Sar-112987	Sorex araneus	82.26	2.00e-110	393.00
IUUC-Ssc-116071	Sus scrofa	76.73	0.00e+00	1307.00
IUUC-Tgu-116813	Taeniopygia guttata	73.70	4.00e-138	484.00
IUUC-Tru-118359	Takifugu rubripes	65.95	0.00e+00	674.00
IUUC-Tni-119997	Tetraodon nigroviridis	64.95	0.00e+00	667.00
IUUC-Ttr-129020	Tursiops truncatus	73.92	0.00e+00	1292.00
IUUC-Xtr-132552	Xenopus tropicalis	61.38	3.00e-125	441.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence