iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099255

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_752562; POPTR_0001s35300g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s35300	POPTR_0001s35300.1	POPTR_0001s35300.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-28	98.2	98	131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H++ ++++++   dt ++++s+D tikvWD  + 
   Q: 98   HQNAIFDVCWikEDTNILTASGDQTIKVWDAQEK 131
           99*********75599**************6655 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MERSSRSKSL FRDMRSRELG GFRKRRFITQ MGSDFTEMGS VTVEHNGEET PPLSVSFCKT 60
SKYSHILAVS DEDGYVSMFD TRTEFPSEKA RISDWVAHQN AIFDVCWIKE DTNILTASGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGGT CTAGCAGATC TAAATCACTG TTTCGAGACA TGAGGTCAAG AGAGCTGGGT 60
GGTTTTAGAA AACGGCGCTT TATTACCCAA ATGGGATCCG ATTTCACTGA AATGGGATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s35300g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002111	Ailuropoda melanoleuca	36.44	3.00e-62	232.00
IUUC-Atr-003097	Amborella trichopoda	54.97	5.00e-133	467.00
IUUC-Apl-004088	Anas platyrhynchos	38.95	6.00e-65	241.00
IUUC-Aca-004732	Anolis carolinensis	35.66	2.00e-63	236.00
IUUC-Aly-005686	Arabidopsis lyrata	57.87	9.00e-151	526.00
IUUC-Ath-006970	Arabidopsis thaliana	57.01	2.00e-144	505.00
IUUC-Acl-008219	Aspergillus clavatus	26.64	1.00e-23	104.00
IUUC-Afl-008558	Aspergillus flavus	37.86	1.00e-15	77.00
IUUC-Afu-008784	Aspergillus fumigatus	26.30	3.00e-21	96.70
IUUC-Ani-009304	Aspergillus nidulans	27.20	4.00e-18	86.30
IUUC-Ang-009842	Aspergillus niger	24.49	1.00e-19	91.70
IUUC-Aor-009883	Aspergillus oryzae	27.04	1.00e-22	101.00
IUUC-Ate-010454	Aspergillus terreus	29.89	1.00e-20	93.20
IUUC-Ame-010949	Astyanax mexicanus	34.57	5.00e-58	218.00
IUUC-Bta-012333	Bos taurus	36.60	3.00e-62	232.00
IUUC-Bci-013733	Botrytis cinerea	28.01	6.00e-21	95.50
IUUC-Bdi-014494	Brachypodium distachyon	49.90	1.00e-123	436.00
IUUC-Bol-015301	Brassica oleracea	56.95	8.00e-157	546.00
IUUC-Bra-017384	Brassica rapa	57.34	7.00e-152	530.00
IUUC-Cel-018498	Caenorhabditis elegans	28.18	4.00e-33	135.00
IUUC-Cja-019534	Callithrix jacchus	36.41	8.00e-59	221.00
IUUC-Cfa-020847	Canis familiaris	35.45	9.00e-62	231.00
IUUC-Cpo-021695	Cavia porcellus	37.29	5.00e-62	232.00
IUUC-Cre-022762	Chlamydomonas reinhardtii	30.57	3.00e-46	181.00
IUUC-Csa-023748	Chlorocebus sabaeus	36.44	1.00e-61	230.00
IUUC-Cho-024445	Choloepus hoffmanni	30.53	4.00e-34	139.00
IUUC-Cgl-026664	Colletotrichum gloeosporioides	22.81	2.00e-16	80.50
IUUC-Cme-027343	Cyanidioschyzon merolae	27.24	5.00e-10	59.30
IUUC-Dre-027536	Danio rerio	36.39	3.00e-61	229.00
IUUC-Dno-030035	Dasypus novemcinctus	35.41	3.00e-60	226.00
IUUC-Dor-030814	Dipodomys ordii	36.89	2.00e-19	90.10
IUUC-Dse-031354	Dothistroma septosporum	25.92	6.00e-28	118.00
IUUC-Dme-031691	Drosophila melanogaster	33.91	9.00e-50	191.00
IUUC-Ete-032814	Echinops telfairi	35.77	8.00e-35	141.00
IUUC-Eca-033332	Equus caballus	36.02	9.00e-62	231.00
IUUC-Fca-035571	Felis catus	35.45	7.00e-62	231.00
IUUC-Fal-037421	Ficedula albicollis	39.66	7.00e-65	241.00
IUUC-Fox-038069	Fusarium oxysporum	26.84	3.00e-18	86.30
IUUC-Fso-038192	Fusarium solani	22.82	8.00e-20	91.70
IUUC-Gmo-039365	Gadus morhua	34.59	9.00e-56	211.00
IUUC-Ggr-039904	Gaeumannomyces graminis	28.04	2.00e-17	84.30
IUUC-Gga-041153	Gallus gallus	38.97	3.00e-64	239.00
IUUC-Gac-041984	Gasterosteus aculeatus	34.02	1.00e-59	223.00
IUUC-Gma-043734	Glycine max	63.64	7.00e-169	586.00
IUUC-Ggo-044419	Gorilla gorilla	36.34	6.00e-60	225.00
IUUC-Hsa-045862	Homo sapiens	36.44	2.00e-61	230.00
IUUC-Hvu-047728	Hordeum vulgare	52.85	2.00e-130	458.00
IUUC-Itr-048786	Ictidomys tridecemlineatus	37.01	2.00e-62	233.00
IUUC-Lch-050616	Latimeria chalumnae	36.99	9.00e-63	234.00
IUUC-Lpe-051222	Leersia perrieri	49.49	2.00e-124	439.00
IUUC-Loc-052564	Lepisosteus oculatus	37.01	4.00e-58	219.00
IUUC-Lma-053098	Leptosphaeria maculans	26.47	1.00e-28	120.00
IUUC-Laf-053892	Loxodonta africana	35.53	9.00e-61	228.00
IUUC-Mcc-055854	Macaca mulatta	36.44	1.00e-61	230.00
IUUC-Mor-057144	Magnaporthe oryzae	26.91	4.00e-18	86.30
IUUC-Mpo-057501	Magnaporthe poae	27.99	7.00e-16	78.60
IUUC-Mtr-058510	Medicago truncatula	56.05	5.00e-146	510.00
IUUC-Mla-058823	Melampsora laricipopulina	25.75	1.00e-21	97.40
IUUC-Mga-060128	Meleagris gallopavo	38.97	1.00e-64	241.00
IUUC-Mvi-060475	Microbotryum violaceum	32.28	1.00e-43	171.00
IUUC-Mmr-061331	Microcebus murinus	35.59	2.00e-60	226.00
IUUC-Mdo-063020	Monodelphis domestica	34.85	2.00e-64	239.00
IUUC-Mmu-063713	Mus musculus	37.07	8.00e-63	234.00
IUUC-Mac-064653	Musa acuminata	55.04	3.00e-152	531.00
IUUC-Mpu-066490	Mustela putorius furo	35.73	2.00e-62	233.00
IUUC-Mlu-067900	Myotis lucifugus	35.16	2.00e-60	226.00
IUUC-Nfi-068433	Neosartorya fischeri	26.98	2.00e-22	100.00
IUUC-Ncr-068776	Neurospora crassa	29.60	3.00e-26	113.00
IUUC-Nle-069675	Nomascus leucogenys	35.10	9.00e-56	211.00
IUUC-Ont-071441	Oreochromis niloticus	35.10	2.00e-60	226.00
IUUC-Oan-072757	Ornithorhynchus anatinus	35.69	8.00e-61	228.00
IUUC-Ocu-074670	Oryctolagus cuniculus	36.31	2.00e-62	233.00
IUUC-Oba-075844	Oryza barthii	48.98	3.00e-121	428.00
IUUC-Obr-076625	Oryza brachyantha	49.80	8.00e-128	450.00
IUUC-Ogl-077771	Oryza glaberrima	48.98	3.00e-121	427.00
IUUC-Ogu-078475	Oryza glumaepatula	45.93	1.00e-104	372.00
IUUC-Oin-079958	Oryza indica	48.98	3.00e-121	427.00
IUUC-Olo-080311	Oryza longistaminata	50.60	6.00e-105	373.00
IUUC-Ome-081985	Oryza meridionalis	48.37	7.00e-120	423.00
IUUC-Oni-082921	Oryza nivara	48.98	3.00e-121	427.00
IUUC-Opu-083174	Oryza punctata	49.69	4.00e-117	414.00
IUUC-Oru-084338	Oryza rufipogon	49.79	4.00e-121	427.00
IUUC-Osa-085609	Oryza sativa	47.44	4.00e-41	160.00
IUUC-Olu-087907	Ostreococcus lucimarinus	25.91	3.00e-24	105.00
IUUC-Oga-088358	Otolemur garnettii	36.44	2.00e-61	229.00
IUUC-Oar-089994	Ovis aries	36.31	2.00e-62	233.00
IUUC-Ptr-091338	Pan troglodytes	36.44	2.00e-61	230.00
IUUC-Pan-091759	Papio anubis	36.34	4.00e-60	225.00
IUUC-Psi-093211	Pelodiscus sinensis	37.82	2.00e-62	233.00
IUUC-Pma-094588	Petromyzon marinus	31.06	4.00e-31	127.00
IUUC-Pno-094964	Phaeosphaeria nodorum	28.47	5.00e-31	129.00
IUUC-Ppa-095159	Physcomitrella patens	51.29	6.00e-101	360.00
IUUC-Pfo-096592	Poecilia formosa	29.43	2.00e-51	196.00
IUUC-Pab-098597	Pongo abelii	27.64	2.00e-33	136.00
IUUC-Pca-100593	Procavia capensis	30.17	6.00e-42	165.00
IUUC-Ppe-101333	Prunus persica	69.43	0.00e+00	676.00
IUUC-Pva-102283	Pteropus vampyrus	35.43	2.00e-52	200.00
IUUC-Pgr-103383	Puccinia graminis	27.70	3.00e-20	92.80
IUUC-Ptt-103974	Puccinia triticina	27.78	5.00e-18	85.10
IUUC-Pte-104329	Pyrenophora teres	25.76	2.00e-25	110.00
IUUC-Pyt-104424	Pyrenophora triticirepentis	25.27	2.00e-24	107.00
IUUC-Rno-105720	Rattus norvegicus	36.89	1.00e-63	237.00
IUUC-Sha-106891	Sarcophilus harrisii	35.54	4.00e-57	215.00
IUUC-Sja-107723	Schizosaccharomyces japonicus	30.99	8.00e-33	134.00
IUUC-Spo-108060	Schizosaccharomyces pombe	30.50	2.00e-32	133.00
IUUC-Ssl-108481	Sclerotinia sclerotiorum	25.50	2.00e-18	87.40
IUUC-Sit-109862	Setaria italica	52.22	8.00e-129	453.00
IUUC-Sly-111468	Solanum lycopersicum	60.75	3.00e-173	601.00
IUUC-Stu-112346	Solanum tuberosum	59.69	2.00e-171	594.00
IUUC-Sar-113734	Sorex araneus	51.85	2.00e-20	93.60
IUUC-Sbi-114076	Sorghum bicolor	49.52	2.00e-131	462.00
IUUC-Sre-114918	Sporisorium reilianum	24.08	4.00e-18	86.30
IUUC-Ssc-115561	Sus scrofa	35.92	3.00e-60	226.00
IUUC-Tgu-117011	Taeniopygia guttata	38.68	2.00e-64	239.00
IUUC-Tru-118411	Takifugu rubripes	34.52	6.00e-57	214.00
IUUC-Tsy-119367	Tarsius syrichta	32.44	6.00e-40	158.00
IUUC-Tni-120301	Tetraodon nigroviridis	31.59	3.00e-57	216.00
IUUC-Tca-121265	Theobroma cacao	70.62	0.00e+00	632.00
IUUC-Tre-121997	Trichoderma reesei	24.42	7.00e-22	98.60
IUUC-Tvi-122292	Trichoderma virens	25.46	3.00e-23	103.00
IUUC-Tae-125188	Triticum aestivum	50.72	2.00e-131	462.00
IUUC-Tur-126794	Triticum urartu	51.12	2.00e-105	375.00
IUUC-Tme-127090	Tuber melanosporum	29.50	2.00e-25	109.00
IUUC-Tbe-127646	Tupaia belangeri	34.18	1.00e-52	201.00
IUUC-Ttr-128171	Tursiops truncatus	35.73	7.00e-62	231.00
IUUC-Uma-129525	Ustilago maydis	25.34	5.00e-18	86.30
IUUC-Vda-129871	Verticillium dahliae	23.44	8.00e-21	95.10
IUUC-Vpa-130554	Vicugna pacos	34.04	3.00e-24	106.00
IUUC-Vvi-131698	Vitis vinifera	69.08	0.00e+00	681.00
IUUC-Xtr-131962	Xenopus tropicalis	37.01	7.00e-61	228.00
IUUC-Xma-133803	Xiphophorus maculatus	32.23	4.00e-58	219.00
IUUC-Zma-135693	Zea mays	47.29	2.00e-119	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence