iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-23	80.1	224	254

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlr 31
           +H+++v++la +d++++sGs+D t+k+WD+ 
   Q: 224  THKGWVWSLAAQDHRVCSGSWDSTVKLWDMA 254
           5********99789***************86 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MELPSGQCGN PRSCEDESDP EPEPDPDAQA EAYVARVLTP PKPGMTPRRS SLQSMFSASL 60
GMPERKDASK VPAVSLPGLL SLPPELLLEI CAYLDARVVL HVLPCVCQAL HNLVRDRVTW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGATCTCGC GCTGCCTAGG AAACAAGACG CGGCCCTGGC CAAACCTGAG ACAGCCGCGC 60
CTACCCCGGC GCCATGGAGC TTCCCTCAGG GCAGTGTGGG AATCCTCGCT CTTGTGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00256--FBOX
SM00320--WD40

KEGG

rno:288921

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001913	Ailuropoda melanoleuca	81.22	0.00e+00	714.00
IUUC-Aca-004823	Anolis carolinensis	63.45	2.00e-148	518.00
IUUC-Bta-012687	Bos taurus	84.50	0.00e+00	717.00
IUUC-Cel-018433	Caenorhabditis elegans	26.25	3.00e-30	125.00
IUUC-Cja-018873	Callithrix jacchus	72.07	1.00e-179	622.00
IUUC-Cfa-020350	Canis familiaris	84.06	0.00e+00	710.00
IUUC-Cpo-021990	Cavia porcellus	82.53	0.00e+00	711.00
IUUC-Csa-023590	Chlorocebus sabaeus	75.33	8.00e-175	606.00
IUUC-Dre-028778	Danio rerio	41.51	1.00e-78	287.00
IUUC-Dor-030840	Dipodomys ordii	70.09	4.00e-153	534.00
IUUC-Eca-034232	Equus caballus	78.25	1.00e-165	575.00
IUUC-Fca-036533	Felis catus	86.08	0.00e+00	719.00
IUUC-Gmo-038675	Gadus morhua	44.26	1.00e-78	286.00
IUUC-Gac-041443	Gasterosteus aculeatus	43.37	8.00e-87	313.00
IUUC-Ggo-044439	Gorilla gorilla	73.77	5.00e-178	617.00
IUUC-Hsa-046835	Homo sapiens	71.11	4.00e-167	580.00
IUUC-Itr-048482	Ictidomys tridecemlineatus	84.22	0.00e+00	714.00
IUUC-Lch-049736	Latimeria chalumnae	52.37	2.00e-123	435.00
IUUC-Loc-051918	Lepisosteus oculatus	59.90	2.00e-68	251.00
IUUC-Laf-054045	Loxodonta africana	81.61	4.00e-121	427.00
IUUC-Mcc-054869	Macaca mulatta	75.55	1.00e-176	612.00
IUUC-Meu-056621	Macropus eugenii	76.34	2.00e-164	571.00
IUUC-Mmr-061740	Microcebus murinus	79.79	0.00e+00	672.00
IUUC-Mdo-062012	Monodelphis domestica	66.45	2.00e-169	588.00
IUUC-Mmu-063107	Mus musculus	94.54	0.00e+00	835.00
IUUC-Mpu-065889	Mustela putorius furo	84.31	0.00e+00	718.00
IUUC-Mlu-067453	Myotis lucifugus	83.84	0.00e+00	693.00
IUUC-Nle-070132	Nomascus leucogenys	78.38	0.00e+00	631.00
IUUC-Opr-070719	Ochotona princeps	61.18	2.00e-135	476.00
IUUC-Ont-072613	Oreochromis niloticus	49.19	7.00e-89	320.00
IUUC-Ocu-074377	Oryctolagus cuniculus	61.31	3.00e-131	461.00
IUUC-Ola-087040	Oryzias latipes	41.90	6.00e-69	254.00
IUUC-Oga-089018	Otolemur garnettii	85.71	0.00e+00	740.00
IUUC-Oar-089327	Ovis aries	83.41	0.00e+00	693.00
IUUC-Ptr-090748	Pan troglodytes	78.21	0.00e+00	632.00
IUUC-Pan-091879	Papio anubis	76.82	8.00e-107	379.00
IUUC-Psi-093031	Pelodiscus sinensis	68.28	5.00e-177	613.00
IUUC-Pfo-096738	Poecilia formosa	45.92	3.00e-68	253.00
IUUC-Pab-097958	Pongo abelii	78.17	4.00e-175	607.00
IUUC-Pca-101049	Procavia capensis	71.43	2.00e-170	592.00
IUUC-Pva-102123	Pteropus vampyrus	79.75	0.00e+00	703.00
IUUC-Sha-107531	Sarcophilus harrisii	77.71	8.00e-161	559.00
IUUC-Sar-113257	Sorex araneus	73.15	3.00e-167	581.00
IUUC-Ssc-115236	Sus scrofa	84.06	0.00e+00	715.00
IUUC-Tru-117762	Takifugu rubripes	45.41	1.00e-88	320.00
IUUC-Tni-120085	Tetraodon nigroviridis	44.19	7.00e-82	297.00
IUUC-Ttr-128831	Tursiops truncatus	84.29	2.00e-172	598.00
IUUC-Xtr-132712	Xenopus tropicalis	51.90	5.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence