iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053470

Ensembl Protein ID

ENSLAFP00000012939.4

UniProt Accession

G3TF59; G3TF59_LOXAF

Protein Name

Uncharacterized protein

Gene Name

WDR60

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000015440.4	ENSLAFT00000015442.4	ENSLAFP00000012939.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-07	31.0	586	620

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           +++vtc++f      ll +G+  g++ vWDlr++ 
   Q: 586  ESKVTCCCFspFKaFLLFAGTVHGSVVVWDLREDS 620
           589******8622356999************9875 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

QRRTKDDTWK ADELRKHLWV AQADSPKDEK KHREKKLHKE SESDLLEYRE RKYKNQDPDT 60
KHKERANERD AHVSKETLRA RKEELRQTTA YHNLLGREAC DKQLLEKVEK KIRSAKREFI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGAAGAA CAAAAGATGA TACATGGAAA GCAGATGAAC TCAGAAAACA CCTCTGGGTA 60
ATATACTTTA CATATTTAAA TTGGGATCCA TTTGGAACCT ATAGGTTTTT TTTTTTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

Gene Ontology

GO:0097546--C:ciliary base
GO:0005868--C:cytoplasmic dynein complex
GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0031021--C:interphase microtubule organizing center
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0060271--P:cilium assembly
GO:0048704--P:embryonic skeletal system morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001741	Ailuropoda melanoleuca	65.04	0.00e+00	1187.00
IUUC-Apl-003689	Anas platyrhynchos	60.15	0.00e+00	810.00
IUUC-Aca-004966	Anolis carolinensis	61.22	0.00e+00	769.00
IUUC-Ame-011562	Astyanax mexicanus	41.62	2.00e-77	283.00
IUUC-Bta-013100	Bos taurus	59.71	0.00e+00	1132.00
IUUC-Cja-019521	Callithrix jacchus	71.52	0.00e+00	1078.00
IUUC-Cfa-020943	Canis familiaris	61.90	0.00e+00	1087.00
IUUC-Cho-024500	Choloepus hoffmanni	80.25	0.00e+00	904.00
IUUC-Dre-028530	Danio rerio	46.82	7.00e-176	611.00
IUUC-Dno-029442	Dasypus novemcinctus	77.19	0.00e+00	1175.00
IUUC-Eca-033951	Equus caballus	67.74	0.00e+00	1251.00
IUUC-Fca-036542	Felis catus	61.03	0.00e+00	1066.00
IUUC-Fal-037079	Ficedula albicollis	58.72	0.00e+00	750.00
IUUC-Gac-041396	Gasterosteus aculeatus	46.46	2.00e-156	546.00
IUUC-Ggo-045638	Gorilla gorilla	68.64	0.00e+00	1161.00
IUUC-Hsa-046371	Homo sapiens	66.32	0.00e+00	1192.00
IUUC-Itr-049031	Ictidomys tridecemlineatus	66.49	0.00e+00	1050.00
IUUC-Lch-049862	Latimeria chalumnae	53.40	0.00e+00	708.00
IUUC-Loc-052637	Lepisosteus oculatus	50.97	2.00e-175	610.00
IUUC-Mcc-055753	Macaca mulatta	71.89	0.00e+00	1182.00
IUUC-Mga-059230	Meleagris gallopavo	60.78	0.00e+00	751.00
IUUC-Mmr-061703	Microcebus murinus	67.94	0.00e+00	932.00
IUUC-Mmu-064346	Mus musculus	74.88	0.00e+00	1185.00
IUUC-Mpu-066650	Mustela putorius furo	69.63	0.00e+00	1077.00
IUUC-Nle-069413	Nomascus leucogenys	66.35	0.00e+00	1162.00
IUUC-Opr-071033	Ochotona princeps	74.14	0.00e+00	1046.00
IUUC-Ont-071388	Oreochromis niloticus	47.52	3.00e-170	592.00
IUUC-Oan-072714	Ornithorhynchus anatinus	53.06	0.00e+00	964.00
IUUC-Ocu-074557	Oryctolagus cuniculus	71.40	0.00e+00	1146.00
IUUC-Oga-088938	Otolemur garnettii	63.99	0.00e+00	1165.00
IUUC-Oar-090053	Ovis aries	58.30	0.00e+00	810.00
IUUC-Pan-091852	Papio anubis	64.35	0.00e+00	1132.00
IUUC-Psi-093781	Pelodiscus sinensis	63.41	0.00e+00	817.00
IUUC-Pfo-096078	Poecilia formosa	45.00	4.00e-146	512.00
IUUC-Pab-097947	Pongo abelii	68.31	0.00e+00	1210.00
IUUC-Rno-105970	Rattus norvegicus	74.74	0.00e+00	1233.00
IUUC-Tgu-117448	Taeniopygia guttata	59.10	0.00e+00	740.00
IUUC-Tni-120297	Tetraodon nigroviridis	45.54	3.00e-157	548.00
IUUC-Xtr-132946	Xenopus tropicalis	52.17	0.00e+00	661.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence