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Tag Content
iUUCD ID IUUC-Mtr-058667
Ensembl Protein ID AES66007
UniProt Accession G7IGS9; A0A0C3V3R7; G7IGS9_MEDTR
Genbank Protein ID AES66007.2
Protein Name Cleavage stimulation factor 50 kDa subunit
Genbank Nucleotide ID CM001218
Gene Name MTR_2g060520
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MTR_2g060520 KEH38145 KEH38145
MTR_2g060520 AES66007 AES66007
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.50e-26 90.2 181 211
UBD/Beta-Prp 4.30e-57 195.0 124 377
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    H +v++l+f + t+lvsG+ D tik +D+
   Q: 181 HIQPVNDLDFnPQgTILVSGAKDQTIKFFDI 211
    8899******9667****************7 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl..............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..g 92
    +hk+v +c fspd++++atgs+d +ik+++v++ k ++++++h ++v++++f+p+g ilv+g++D+tik +d+s+ ++++ +
   Q: 124 EHKNVARCARFSPDGRFVATGSADTSIKLFEVSKIKQmllpdakdgpvrsvVKTYYDHIQPVNDLDFNPQGTILVSGAKDQTIKFFDISKTNAKRSYRviQ 224
    7999******************************9999***************************************************888888888889 PP
   S: 93 hedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh.tdsvyslsfd 189
    +++v+s+sf+psgd+l++G+++ + +++d++t qc+ + ++++ +g++n v+++++g+++v++s+D+++rlWd t++++r t +h t +s f+
   Q: 225 DTHNVRSVSFHPSGDFLLAGTDHAIPHLYDINTFQCYLSaniPDANPNGAINQVRYSCSGSMYVTASKDGAIRLWDGITANCVRSITAAHgTAEATSAVFT 325
    9*************************************************************************************9988345678888** PP
   S: 190 sngkelvsgsldgtvklwdlqtgecvrtlng..htdnvksvrfspnderlvs 239
    s++++++s+++d+t+klw++ +g+ v+++ g ht+ ++ f +e+++s
   Q: 326 SDQRFVLSCGKDSTIKLWEVGSGRLVKQYLGaiHTQLRCQAIFNATEEFILS 377
    ****************************999777777777777788888877 PP
   

Organism Medicago truncatula
Protein Sequence
(Fasta)
MENSSSRSEQ TVEDGKLYRH LNSLIVAHLR HNNLTQAATA VASATMTPFN VQAPPNKLLQ 60
LLSKGLAAEK DDLPRGISSS PFQDLGASLP LPRPGATTID FSSLSDIKGS SKSFPKHETR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mtr-058667|E3,WD_repeat;UBD,Beta-Prp|Medicago truncatula
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGACACTCTA AAACTACTGT AGACAAAAGG AAACAAAAAT GGAAAACAGT AGTAGTAGGT 60
CGGAGCAGAC AGTTGAAGAT GGGAAACTGT ATAGACACCT CAATTCTCTT ATCGTCGCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mtr-058667|E3,WD_repeat;UBD,Beta-Prp|Medicago truncatula
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG mtr:MTR_2g060520
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002163 Ailuropoda melanoleuca 38.08 1.00e-78 286.00
IUUC-Atr-002687 Amborella trichopoda 61.91 9.00e-180 622.00
IUUC-Apl-003438 Anas platyrhynchos 38.55 2.00e-79 289.00
IUUC-Aca-005178 Anolis carolinensis 38.32 3.00e-79 288.00
IUUC-Aly-005791 Arabidopsis lyrata 64.88 2.00e-172 597.00
IUUC-Ath-006689 Arabidopsis thaliana 65.88 6.00e-172 596.00
IUUC-Ame-011217 Astyanax mexicanus 44.44 3.00e-62 231.00
IUUC-Bta-012619 Bos taurus 38.55 8.00e-79 286.00
IUUC-Bdi-014515 Brachypodium distachyon 62.27 4.00e-157 546.00
IUUC-Bra-017450 Brassica rapa 59.52 1.00e-155 541.00
IUUC-Cel-018151 Caenorhabditis elegans 34.57 5.00e-67 247.00
IUUC-Cja-019304 Callithrix jacchus 38.08 7.00e-79 286.00
IUUC-Cfa-020208 Canis familiaris 38.08 1.00e-78 286.00
IUUC-Cpo-022245 Cavia porcellus 38.08 1.00e-78 286.00
IUUC-Csa-023066 Chlorocebus sabaeus 38.08 7.00e-79 286.00
IUUC-Cho-024770 Choloepus hoffmanni 41.36 2.00e-75 275.00
IUUC-Cin-025621 Ciona intestinalis 32.87 3.00e-64 238.00
IUUC-Csv-026071 Ciona savignyi 35.17 2.00e-72 265.00
IUUC-Dre-028254 Danio rerio 37.88 4.00e-77 281.00
IUUC-Dno-029903 Dasypus novemcinctus 38.08 1.00e-78 286.00
IUUC-Dor-030423 Dipodomys ordii 38.08 2.00e-78 285.00
IUUC-Dme-031993 Drosophila melanogaster 32.17 6.00e-65 240.00
IUUC-Eca-033316 Equus caballus 38.08 1.00e-78 286.00
IUUC-Eeu-035001 Erinaceus europaeus 37.64 2.00e-78 285.00
IUUC-Fca-036447 Felis catus 38.08 1.00e-78 286.00
IUUC-Fal-037601 Ficedula albicollis 38.55 2.00e-79 289.00
IUUC-Gmo-038531 Gadus morhua 38.00 7.00e-74 270.00
IUUC-Gga-040869 Gallus gallus 38.55 3.00e-79 288.00
IUUC-Gac-042380 Gasterosteus aculeatus 37.78 1.00e-77 282.00
IUUC-Gma-043478 Glycine max 84.99 0.00e+00 780.00
IUUC-Ggo-045302 Gorilla gorilla 38.08 7.00e-79 286.00
IUUC-Hsa-045678 Homo sapiens 38.08 7.00e-79 286.00
IUUC-Hvu-047301 Hordeum vulgare 64.00 2.00e-157 548.00
IUUC-Itr-048259 Ictidomys tridecemlineatus 38.08 1.00e-78 286.00
IUUC-Lch-050319 Latimeria chalumnae 38.18 4.00e-79 288.00
IUUC-Lpe-051440 Leersia perrieri 49.41 1.00e-134 472.00
IUUC-Loc-052035 Lepisosteus oculatus 38.55 1.00e-78 286.00
IUUC-Laf-054275 Loxodonta africana 38.08 1.00e-78 286.00
IUUC-Mcc-055857 Macaca mulatta 33.41 8.00e-61 226.00
IUUC-Mga-059710 Meleagris gallopavo 38.55 3.00e-79 288.00
IUUC-Mmr-060604 Microcebus murinus 38.08 1.00e-78 286.00
IUUC-Mdo-062953 Monodelphis domestica 38.55 7.00e-79 286.00
IUUC-Mmu-064292 Mus musculus 38.32 8.00e-79 286.00
IUUC-Mac-064568 Musa acuminata 75.68 2.00e-161 561.00
IUUC-Mpu-066294 Mustela putorius furo 43.46 8.00e-49 187.00
IUUC-Mlu-067279 Myotis lucifugus 36.71 3.00e-79 288.00
IUUC-Nle-069322 Nomascus leucogenys 38.08 7.00e-79 286.00
IUUC-Opr-070580 Ochotona princeps 38.55 1.00e-78 286.00
IUUC-Ont-072554 Oreochromis niloticus 37.85 8.00e-78 283.00
IUUC-Oan-072856 Ornithorhynchus anatinus 38.32 2.00e-78 285.00
IUUC-Ocu-074150 Oryctolagus cuniculus 39.19 4.00e-66 244.00
IUUC-Oba-075585 Oryza barthii 57.92 4.00e-151 527.00
IUUC-Obr-076069 Oryza brachyantha 64.52 3.00e-156 544.00
IUUC-Ogl-077045 Oryza glaberrima 63.82 6.00e-166 576.00
IUUC-Ogu-078697 Oryza glumaepatula 64.13 1.00e-158 553.00
IUUC-Oin-080119 Oryza indica 63.82 6.00e-166 576.00
IUUC-Olo-081093 Oryza longistaminata 51.42 2.00e-93 337.00
IUUC-Ome-081718 Oryza meridionalis 54.15 6.00e-133 467.00
IUUC-Oni-082072 Oryza nivara 57.92 4.00e-151 527.00
IUUC-Opu-084080 Oryza punctata 54.86 1.00e-127 448.00
IUUC-Oru-085070 Oryza rufipogon 60.05 8.00e-151 527.00
IUUC-Osa-086149 Oryza sativa 63.82 6.00e-166 576.00
IUUC-Ola-086697 Oryzias latipes 38.08 1.00e-77 283.00
IUUC-Oga-088697 Otolemur garnettii 38.08 1.00e-78 286.00
IUUC-Oar-089774 Ovis aries 38.08 1.00e-78 286.00
IUUC-Ptr-090924 Pan troglodytes 38.08 7.00e-79 286.00
IUUC-Pan-092373 Papio anubis 38.08 1.00e-78 286.00
IUUC-Psi-094001 Pelodiscus sinensis 38.55 5.00e-79 287.00
IUUC-Pma-094274 Petromyzon marinus 35.70 6.00e-73 267.00
IUUC-Ppa-095562 Physcomitrella patens 64.86 9.00e-173 598.00
IUUC-Pfo-097235 Poecilia formosa 38.08 1.00e-77 282.00
IUUC-Pab-098608 Pongo abelii 38.08 7.00e-79 286.00
IUUC-Pca-100268 Procavia capensis 38.55 8.00e-79 286.00
IUUC-Ppe-101425 Prunus persica 74.15 0.00e+00 687.00
IUUC-Pva-103183 Pteropus vampyrus 38.08 1.00e-78 286.00
IUUC-Rno-105097 Rattus norvegicus 38.32 8.00e-79 286.00
IUUC-Sha-107642 Sarcophilus harrisii 38.55 7.00e-79 286.00
IUUC-Smo-108680 Selaginella moellendorffii 60.24 2.00e-155 541.00
IUUC-Sit-110471 Setaria italica 64.17 3.00e-166 578.00
IUUC-Sly-111143 Solanum lycopersicum 65.77 2.00e-98 351.00
IUUC-Stu-111926 Solanum tuberosum 77.50 3.00e-77 280.00
IUUC-Sar-112947 Sorex araneus 43.70 1.00e-62 232.00
IUUC-Sbi-113769 Sorghum bicolor 64.55 5.00e-162 563.00
IUUC-Ssc-115736 Sus scrofa 38.08 1.00e-78 286.00
IUUC-Tgu-117457 Taeniopygia guttata 38.55 2.00e-79 289.00
IUUC-Tru-117760 Takifugu rubripes 38.08 1.00e-77 282.00
IUUC-Tsy-118943 Tarsius syrichta 37.38 7.00e-75 273.00
IUUC-Tni-120081 Tetraodon nigroviridis 37.62 4.00e-77 281.00
IUUC-Tca-121190 Theobroma cacao 76.69 0.00e+00 710.00
IUUC-Tae-125535 Triticum aestivum 64.49 5.00e-154 536.00
IUUC-Tur-126329 Triticum urartu 68.79 4.00e-147 514.00
IUUC-Tbe-127878 Tupaia belangeri 37.38 1.00e-77 283.00
IUUC-Ttr-128985 Tursiops truncatus 38.08 1.00e-78 286.00
IUUC-Vpa-130147 Vicugna pacos 38.08 2.00e-78 285.00
IUUC-Vvi-130935 Vitis vinifera 73.17 0.00e+00 684.00
IUUC-Xtr-132482 Xenopus tropicalis 37.85 1.00e-77 283.00
IUUC-Xma-133929 Xiphophorus maculatus 38.08 1.00e-77 282.00
Created Date 25-Jun-2017

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